mRNA_E-siliculosus-1a_F_contig10938.647.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10938.647.1 vs. uniprot
Match: A0A2A4HFB4_9GAMM (Big_11 domain-containing protein (Fragment) n=1 Tax=Halomonas nigrificans TaxID=2042704 RepID=A0A2A4HFB4_9GAMM) HSP 1 Score: 813 bits (2099), Expect = 2.280e-288 Identity = 412/508 (81.10%), Postives = 459/508 (90.35%), Query Frame = 1 Query: 280 VVALDDLATAEVGIIPVSESRSDSGTDTVLVNIGSTTNTYEFEVAQGSKTDVSFSADVGGLLSVLDNAYVDLEVFENGEWVSLADSSSSGLLDLLGIFGENAQVEASGLEAGEYRIVYGGGGLVGLATNVDWSAEFTDNSLTDFEGVPGDPITGNVITDPSFIEGEQDQLGVDDLATVHIQVDGEFVDAGTGTVVVGEHGQLTIDADGNYEYIPNGDVESVGKVDSFEYQLVHPDGSTDTANLYIRIDSEDADLIWDDSDPSAPAIAVMANNDQDEAQIEVVNVVTTTTEADAIEYSWLLGIGGIVLGDTAGSTEFSLGEETLTDLTIGIDVGSLASLLDSVDFQLFKLEDDGSETLVMDMDQASLLDLIGIFPTSLELTVEGLEAGNYRLDVSNGSLVSLPGSVSVDLNYETTDLTEFTAGEVFETTGNIIADDVLGSTYTTLSVMNAEGEFVIPGHGGLVIEGEYGVLVIMANGDYSYVPN-ADMGSIGETETFTYQLTHPNGDTS 1800 VVA DDLATA+VGI+PVSESR DSGTDTVLVNIG TNTYEFEV +GS TDVSF+ADVG LL+VLD+ VDL+VFENG+WVSL DSSS+GLLDL+G+FGENAQVEASGLEAG+YR+ YGGGGL+GLAT+VDWSAEFTDNSLTD+EGV GDPI GNVITDPSF EGEQDQLG+D LA VHI VDG+FV+AG GTVV GEHG LTIDADGNYEY+PNGDVESVG+VD FEYQLVHPDGSTDTANLYIRIDSEDADLIWDD+DPSAPAIAVMAN+D D AQIEVVNVV+TTTE +AI+YSW LGIGGIVLG T+GSTEFSL E+TLTDL I IDVGSLASLLDSVDFQL+KLE DGSETLVMDMDQASLLDLIGIFPTS+ +TVEGLEAGNYRLDVSNGSLVSLPG V+VDL YETT LTE G+ F T+GN++ADD LGS +TTLSVMN +G FVIPGHGG+VIEGEYGVL IM+NGDY YVPN +D+G IG+ ++FTY+LTHPNG+ S Sbjct: 32 VVAFDDLATADVGIVPVSESRFDSGTDTVLVNIGQVTNTYEFEVPEGSLTDVSFTADVGSLLTVLDSVSVDLQVFENGQWVSLEDSSSAGLLDLIGLFGENAQVEASGLEAGDYRVTYGGGGLLGLATSVDWSAEFTDNSLTDYEGVAGDPIMGNVITDPSFAEGEQDQLGLDSLAVVHILVDGDFVEAGAGTVVEGEHGTLTIDADGNYEYVPNGDVESVGQVDVFEYQLVHPDGSTDTANLYIRIDSEDADLIWDDNDPSAPAIAVMANDDIDAAQIEVVNVVSTTTEEEAIDYSWFLGIGGIVLGSTSGSTEFSLDEDTLTDLAINIDVGSLASLLDSVDFQLYKLEGDGSETLVMDMDQASLLDLIGIFPTSVAVTVEGLEAGNYRLDVSNGSLVSLPGGVTVDLTYETTLLTEVEPGDTFATSGNVLADDNLGSEHTTLSVMNEDGVFVIPGHGGVVIEGEYGVLTIMSNGDYEYVPNGSDLGEIGQADSFTYKLTHPNGEES 539
BLAST of mRNA_E-siliculosus-1a_F_contig10938.647.1 vs. uniprot
Match: UPI00186584F5 (VCBS domain-containing protein n=1 Tax=unclassified Halomonas TaxID=2609666 RepID=UPI00186584F5) HSP 1 Score: 808 bits (2087), Expect = 3.270e-287 Identity = 409/493 (82.96%), Postives = 449/493 (91.08%), Query Frame = 1 Query: 322 IPVSESRSDSGTDTVLVNIGSTTNTYEFEVAQGSKTDVSFSADVGGLLSVLDNAYVDLEVFENGEWVSLADSSSSGLLDLLGIFGENAQVEASGLEAGEYRIVYGGGGLVGLATNVDWSAEFTDNSLTDFEGVPGDPITGNVITDPSFIEGEQDQLGVDDLATVHIQVDGEFVDAGTGTVVVGEHGQLTIDADGNYEYIPNGDVESVGKVDSFEYQLVHPDGSTDTANLYIRIDSEDADLIWDDSDPSAPAIAVMANNDQDEAQIEVVNVVTTTTEADAIEYSWLLGIGGIVLGDTAGSTEFSLGEETLTDLTIGIDVGSLASLLDSVDFQLFKLEDDGSETLVMDMDQASLLDLIGIFPTSLELTVEGLEAGNYRLDVSNGSLVSLPGSVSVDLNYETTDLTEFTAGEVFETTGNIIADDVLGSTYTTLSVMNAEGEFVIPGHGGLVIEGEYGVLVIMANGDYSYVPNADMGSIGETETFTYQLTHPNGDTS 1800 +PVSESR DSGTD+VLVNIG TNTYEFEV +GS TDVSF+ADVG LL++LDNA+VDLEVFENGEWVSL DSSS GLLDL+GIFGENAQVEASGLEAG+YR++YGGGGL+GLAT+V WSAEFTDNSLTD+EGV GDPI GNVITDPSF EGEQDQLGVD LA VHI + G FV+AG GTVV GE+GQLTIDADGNYEY+PNGDVESVGKVD FEYQLVHPDGSTDTANLY+RIDSEDADL+WDD+DPSAPA AVMAN+D AQIEVVNVVTTTTE + I+YSWL+G GIV+GDT GS+EFSL E+TLTDLTI IDVGSLASLLDSVDFQL+KLE DGSETLVMDMDQASLLDLIGIFPTS+ +TVEGLEAGNYRLDVSNGS+VSLPGSVSV L YETTDLTEFTAGEVFETTGN+I DD LGS +TTLSVMN +G FVIPGHGG+VIEGEYGVL IM+NGDYSYVPNA+M +IGETE FTY+LTHPNGD S Sbjct: 1 MPVSESRFDSGTDSVLVNIGQVTNTYEFEVPEGSLTDVSFTADVGALLALLDNAFVDLEVFENGEWVSLDDSSSGGLLDLIGIFGENAQVEASGLEAGDYRVIYGGGGLLGLATSVSWSAEFTDNSLTDYEGVAGDPIMGNVITDPSFAEGEQDQLGVDGLAVVHILLGGVFVEAGAGTVVEGEYGQLTIDADGNYEYVPNGDVESVGKVDVFEYQLVHPDGSTDTANLYVRIDSEDADLVWDDNDPSAPATAVMANDDIGAAQIEVVNVVTTTTEEEVIDYSWLIGFLGIVIGDTEGSSEFSLAEDTLTDLTINIDVGSLASLLDSVDFQLYKLEGDGSETLVMDMDQASLLDLIGIFPTSVAVTVEGLEAGNYRLDVSNGSVVSLPGSVSVGLIYETTDLTEFTAGEVFETTGNVIDDDTLGSEHTTLSVMNEDGVFVIPGHGGVVIEGEYGVLTIMSNGDYSYVPNAEMANIGETEVFTYKLTHPNGDES 493
BLAST of mRNA_E-siliculosus-1a_F_contig10938.647.1 vs. uniprot
Match: A0A1U9R4W4_9GAMM (Uncharacterized protein n=1 Tax=Halomonas sp. 'Soap Lake #7' TaxID=1962264 RepID=A0A1U9R4W4_9GAMM) HSP 1 Score: 828 bits (2138), Expect = 1.480e-267 Identity = 420/507 (82.84%), Postives = 461/507 (90.93%), Query Frame = 1 Query: 280 VVALDDLATAEVGIIPVSESRSDSGTDTVLVNIGSTTNTYEFEVAQGSKTDVSFSADVGGLLSVLDNAYVDLEVFENGEWVSLADSSSSGLLDLLGIFGENAQVEASGLEAGEYRIVYGGGGLVGLATNVDWSAEFTDNSLTDFEGVPGDPITGNVITDPSFIEGEQDQLGVDDLATVHIQVDGEFVDAGTGTVVVGEHGQLTIDADGNYEYIPNGDVESVGKVDSFEYQLVHPDGSTDTANLYIRIDSEDADLIWDDSDPSAPAIAVMANNDQDEAQIEVVNVVTTTTEADAIEYSWLLGIGGIVLGDTAGSTEFSLGEETLTDLTIGIDVGSLASLLDSVDFQLFKLEDDGSETLVMDMDQASLLDLIGIFPTSLELTVEGLEAGNYRLDVSNGSLVSLPGSVSVDLNYETTDLTEFTAGEVFETTGNIIADDVLGSTYTTLSVMNAEGEFVIPGHGGLVIEGEYGVLVIMANGDYSYVPNADMGSIGETETFTYQLTHPNGDTS 1800 V A DDLATA+VGI+PVSESR DSGTD+VLVNIG TNTYEFEV +GS TDVSF+ADVG LL++LDNA+VDLEVFENGEWVSL DSSS GLLDL+GIFGENAQVEASGLEAG+YR++YGGGGL+GLAT+V WSAEFTDNSLTD+EGV GDPI GNVITDPSF EGEQDQLGVD LA VHI + G FV+AG GTVV GE+GQLTIDADGNYEY+PNGDVESVGKVD FEYQLVHPDGSTDTANLY+RIDSEDADL+WDD+DPSAPA AVMAN+D AQIEVVNVVTTTTE + I+YSWL+G GIV+GDT GS+EFSL E+TLTDLTI IDVGSLASLLDSVDFQL+KLE DGSETLVMDMDQASLLDLIGIFPTS+ +TVEGLEAGNYRLDVSNGS+VSLPGSVSV L YETTDLTEFTAGEVFETTGN+I DD LGS +TTLSVMN +G FVIPGHGG+VIEGEYGVL IM+NGDYSYVPNA+M +IGETE FTY+LTHPNGD S Sbjct: 2753 VEAFDDLATADVGIVPVSESRFDSGTDSVLVNIGQVTNTYEFEVPEGSLTDVSFTADVGALLALLDNAFVDLEVFENGEWVSLDDSSSGGLLDLIGIFGENAQVEASGLEAGDYRVIYGGGGLLGLATSVSWSAEFTDNSLTDYEGVAGDPIMGNVITDPSFAEGEQDQLGVDGLAVVHILLGGVFVEAGAGTVVEGEYGQLTIDADGNYEYVPNGDVESVGKVDVFEYQLVHPDGSTDTANLYVRIDSEDADLVWDDNDPSAPATAVMANDDIGAAQIEVVNVVTTTTEEEVIDYSWLIGFLGIVIGDTEGSSEFSLAEDTLTDLTINIDVGSLASLLDSVDFQLYKLEGDGSETLVMDMDQASLLDLIGIFPTSVAVTVEGLEAGNYRLDVSNGSVVSLPGSVSVGLIYETTDLTEFTAGEVFETTGNVIDDDTLGSEHTTLSVMNEDGVFVIPGHGGVVIEGEYGVLTIMSNGDYSYVPNAEMANIGETEVFTYKLTHPNGDES 3259
BLAST of mRNA_E-siliculosus-1a_F_contig10938.647.1 vs. uniprot
Match: UPI00193DF45F (Ig-like domain-containing protein n=7 Tax=Halomonas TaxID=2745 RepID=UPI00193DF45F) HSP 1 Score: 794 bits (2050), Expect = 1.220e-263 Identity = 402/506 (79.45%), Postives = 448/506 (88.54%), Query Frame = 1 Query: 280 VVALDDLATAEVGIIPVSESRSDSGTDTVLVNIGSTTNTYEFEVAQGSKTDVSFSADVGGLLSVLDNAYVDLEVFENGEWVSLADSSSSGLLDLLGIFGENAQVEASGLEAGEYRIVYGGGGLVGLATNVDWSAEFTDNSLTDFEGVPGDPITGNVITDPSFIEGEQDQLGVDDLATVHIQVDGEFVDAGTGTVVVGEHGQLTIDADGNYEYIPNGDVESVGKVDSFEYQLVHPDGSTDTANLYIRIDSEDADLIWDDSDPSAPAIAVMANNDQDEAQIEVVNVVTTTTEADAIEYSWLLGIGGIVLGDTAGSTEFSLGEETLTDLTIGIDVGSLASLLDSVDFQLFKLEDDGSETLVMDMDQASLLDLIGIFPTSLELTVEGLEAGNYRLDVSNGSLVSLPGSVSVDLNYETTDLTEFTAGEVFETTGNIIADDVLGSTYTTLSVMNAEGEFVIPGHGGLVIEGEYGVLVIMANGDYSYVPNADMGSIGETETFTYQLTHPNGDT 1797 VVA +DLATA VGI+PVSESRSDSGTDTVLV IG TNTYEF V +GS TDVSF+ADVGGLL+VLDN +VDLEVFENG+WVSL DSSSSGLLDL+GIFGE+AQVEASGLEAG YR++YGGG LVG++T+V WSA+FTDNSLTDFEG+ GDPITGNVITDPSF+EGEQDQLGV DLA V+IQV G FV+AG GTVV GE+G LTID DGNY Y+PN VES+G V+ F YQLVHPD STDTANLYIRIDSEDADLIWDD+ PSAPA +MAN++ D Q++VVNVVTTTT +AI+YSWLLG+GGIVLG T GST FSL E+TLTDLTI IDVGSL SLLDSVDFQL+KLE DGSETL+MDMDQASLLDLIGIFPTSLE+ VEGLEAGNYRLDVSNG +VSLPG V+VDL YETTDLTEFTAGEVFE+ GN+IADD LGS YTTLSVMN GEFV+PGHGG+V+EGEYGVL IM+NGDYSYVPNA+M +IGETE FTYQL HPNG T Sbjct: 1411 VVAFNDLATAGVGIVPVSESRSDSGTDTVLVTIGQVTNTYEFTVPEGSLTDVSFTADVGGLLAVLDNTFVDLEVFENGDWVSLEDSSSSGLLDLVGIFGEDAQVEASGLEAGNYRVIYGGGSLVGVSTSVAWSAQFTDNSLTDFEGIAGDPITGNVITDPSFVEGEQDQLGVADLAEVYIQVAGTFVEAGAGTVVEGEYGTLTIDTDGNYSYVPNVAVESIGLVEIFAYQLVHPDSSTDTANLYIRIDSEDADLIWDDNSPSAPATVMMANDNIDAGQVDVVNVVTTTTAEEAIDYSWLLGVGGIVLGPTEGSTAFSLAEDTLTDLTINIDVGSLVSLLDSVDFQLYKLEGDGSETLIMDMDQASLLDLIGIFPTSLEIPVEGLEAGNYRLDVSNGGVVSLPGGVTVDLTYETTDLTEFTAGEVFESMGNVIADDNLGSEYTTLSVMNELGEFVMPGHGGVVVEGEYGVLTIMSNGDYSYVPNAEMVNIGETEVFTYQLAHPNGTT 1916
BLAST of mRNA_E-siliculosus-1a_F_contig10938.647.1 vs. uniprot
Match: UPI001CE3CF85 (Ig-like domain-containing protein n=1 Tax=Halomonas sp. FME1 TaxID=2487701 RepID=UPI001CE3CF85) HSP 1 Score: 541 bits (1394), Expect = 5.730e-175 Identity = 287/509 (56.39%), Postives = 370/509 (72.69%), Query Frame = 1 Query: 280 VVALDDLATAEVGIIPVSESRSDSGTDTVLVNIGSTTNTYEFEVAQGSKTDVSFSADVGGLLSVLDNAYVDLEVFENGEWVSLADSSSS-GLLDLLGIFGENAQVEASGLEAGEYRIVYGGGGLVGLATNVDWSAEFTDNSLTDFEGVPGDPITGNVITDPSFIEGEQDQLGVDDLATVHIQVDGEFVDAGTGTVVVGEHGQLTIDADGNYEYIPNGDVESVGKVDSFEYQLVHPDGSTDTANLYIRIDSEDADLIWDDSDPSAPAIAVMANNDQDEAQIEVVNVVTTTTEADAIEYSWLLGIGGIVLGDTAGSTEFSLGEETLTDLTIGIDVGSLASLLDSVDFQLFKLEDDGSETLVMDMDQASLLDLIGIFPTSLELTVEGLEAGNYRLDVSNGSLVSLPGSVSVDLNYETTDLTEFTAGEVFETTGNIIADDVLGSTYTTLSVMNAEGEFVIPGHGGLVIEGEYGVLVIMANGDYSYVPNAD-MGSIGETETFTYQLTHPNGDTS 1800 V A DDLA A+VG+ P + DSG+ +L+N+ + YEF V +GS +SF A+VG L+S+ D A++DL+V ENGEW+SL+DS S GL+D+LGIFG +AQVEAS LEAGEYR+VYG ++ + ++W+ E TD SLTDF G+PGDPI+GNVITDPSF+EGEQDQLG+DDLA ++I VDG FVDAGTGTVV GEHGQLTIDADGNY Y PNGD ESVG+V+ FEYQLVHPDG+TDTANLYIRIDSEDADL+WDDSD SAPA+ V AN+D D AQIEVVN+VTT AI+Y+ +L GG +G+ +FS+ +ET++D+TI + LA+LL +++F L ++ DG + D L+D+IGI S++ T+E L AG YRL+VSN L L +++ +++ETT LTE AG+V +GN+I DD LGS T +SVMN +G FVIP L IM+NGDY YVPN D + IG+T++FTY+LTHPNGD S Sbjct: 319 VTAYDDLAYADVGLAPDVSTSVDSGSQFLLLNLFGASEFYEFTVEEGSVGGLSFDANVGSLVSLFDGAFIDLQVMENGEWISLSDSDSGLGLIDVLGIFGSSAQVEASELEAGEYRVVYGSTNVLAAGSTINWAVEVTDTSLTDFSGLPGDPISGNVITDPSFVEGEQDQLGIDDLAGLNILVDGVFVDAGTGTVVEGEHGQLTIDADGNYTYEPNGDAESVGQVEVFEYQLVHPDGTTDTANLYIRIDSEDADLVWDDSDLSAPAVTVDANDDLDSAQIEVVNIVTTEEVPTAIQYTSVLLFGG------SGTFDFSISDETVSDVTIDVSSSGLANLLTNMNFTLSEMI-DGQWVQIADGSDGGLIDIIGIGADSIQATMEALAAGEYRLEVSNAGL-GLLTNITAGVSFETTHLTEVVAGDVSGASGNVIVDDHLGSDNTAVSVMNGDGVFVIPXXXXXXXXXXXXQLTIMSNGDYEYVPNGDNLNGIGQTDSFTYKLTHPNGDES 819
BLAST of mRNA_E-siliculosus-1a_F_contig10938.647.1 vs. uniprot
Match: A0A4U6BK69_9HYPH (BapA prefix-like domain-containing protein n=1 Tax=Aquamicrobium sp. LC103 TaxID=1120658 RepID=A0A4U6BK69_9HYPH) HSP 1 Score: 423 bits (1088), Expect = 1.390e-128 Identity = 232/506 (45.85%), Postives = 326/506 (64.43%), Query Frame = 1 Query: 286 ALDDLATAEVGIIPVSESRSDSGTDTVLVNIGSTTNTYEFEVAQGSKTDVSFSADVGGLLSVLDNAYVDLEVFENGEWVSLADSSSSGLLDLLGIFGENAQVEASGLEAGEYRIVYGGGGLVGLATNVDWSAEFTDNSLTDFEGVPGDPITGNVITDPSFIEGEQDQLGVDDLATVHIQVDG--EFVDAGTGTVVVGEHGQLTIDADGNYEYIPNGDVESVGKVDSFEYQLVHPDGSTDTANLYIRIDSEDADLIWDDSDPSAPAIAVMANNDQDEAQIEVVNVVTTTTEADAIEYSWLLGIGGIVLGDTAGSTEFSLGEETLTDLTIGIDVGSLASLLDSVDFQLFKLEDDGSETLVMDMDQASLLDLIGIFPTSLELTVEGLEAGNYRLDVSNGSLVSLPGSVSVDLNYETTDLTEFTAGEVFETTGNIIADDVLGSTYTTLSVMNAEGEFVIPGHGGLVIEGEYGVLVIMANGDYSYVPNADMGSIGETETFTYQLTHPNGDT 1797 A DD+ AEV + PV R ++ ++TVL+N+G+ T +YEFEV G TD SF V GLL +L N LEV +GEWV+L DSS GLL+LLG+ G+ Q++ + LE+G YR+ Y GGGLVG T ++ +A D SLT+FEG+ G + GN++ D S +G D + D L + I +DG FV+ G VVG++G LTI+ADG+Y Y NGD +VGKVDSF Y+LVHP TANL+++I S +A L+WD++DPSAPA ++AN+D A IE+VN VTT +++ E SWL G+G + T G FS+ +T+ D+ IG+ G+L L ++ + + G+ +V +LLDLIG+ P + +EGL G+YR+ V+ + + GS++ ++ TT L GE+ TGN++ADD LGS YTTLSVM+ GEFV PG GGL I G++G L I +NGDY+Y PNA++ SIG +++FTYQL HPNGDT Sbjct: 732 AFDDVTGAEVSLSPVVTQREETASNTVLINVGNFTQSYEFEVPDGVTTDASFLVQVEGLLGLLTNVNAVLEVNIDGEWVTLGDSSQGGLLELLGLAGQGIQIDVADLESGSYRLTYSGGGLVGALTTINMTATLDDTSLTEFEGIAGAAVEGNLL-DGSGSDGVPDTVPADGLTVLQIDIDGTGNFVEVTDGMTVVGQYGTLTINADGSYSYQVNGDAAAVGKVDSFAYKLVHPTAGEATANLHVQIGSPEATLVWDEADPSAPATTIVANDDTGSAGIEIVNEVTTGLDSNFAELSWLAGLGQTLT--TEGF--FSVDADTVADVQIGVQTGTLLGLGGTLTLTV-EQNVGGTWQMVETASGGNLLDLIGLLPGRTGMLLEGLGEGDYRVTVAYQVPLGIVGSLTTEVGTTTTHLNVDVPGELTPATGNVLADDTLGSVYTTLSVMDELGEFVRPGAGGLTIVGDHGTLTISSNGDYTYAPNAELASIGLSDSFTYQLHHPNGDT 1231
BLAST of mRNA_E-siliculosus-1a_F_contig10938.647.1 vs. uniprot
Match: UPI001AECF01E (hypothetical protein n=1 Tax=Rhizobium sp. PP-CC-3A-592 TaxID=2135647 RepID=UPI001AECF01E) HSP 1 Score: 406 bits (1044), Expect = 1.670e-125 Identity = 231/515 (44.85%), Postives = 326/515 (63.30%), Query Frame = 1 Query: 280 VVALDDLATAEVGIIPVSESRSDSGTDTVLVNIGSTTNTYEFEVAQGSKTDVSFSADVGGLLSVLDNAYVDLEVFENGEWVSLADSSSSGLLDLLGIFGENAQVEASGLEAGEYRIVYGGGGLVGLATNVDWSAEFTDNSLTDFEGVPGDPITGNVITDPSFIEGEQDQLGVDDLATVHI-QVDGEFVDAGTGTVVVGEHGQLTIDADGNYEYIPNGDVESVGKVDSFEYQLVHPDGSTDTANLYIRIDSEDADLIWDDSDPSAPAIAVMANNDQDEAQIEVVNVVTTTTEADAIEYSWLLGIGGIVLGDTAGST-EFSLGEETLTDLTIGIDVGSLASLLDSVDFQLFKLEDDGSETLVMDMDQASLLDLIGIFPTSLELTVEGLEAGNYRLDVSNGSLVSLPGSVSVDLNYETTDLTEFTAGEVFETTGNIIAD-------DVLGSTYTTLSVMNAEGEFVIPGHGGLVIEGEYGVLVIMANGDYSYVPNADMGSIGETETFTYQLTHPNGDT 1797 V A DD+A V I PV+ RSD+ T+ VL+NIG+ T+TY+F++A G +D +F+ +VGGL+ VL NA LEV NG W + +SSS GLLDL+G+ G+ Q+ AS LEAG YR+ + GGGLVG T +D A F D+SLTDF GV G TGN++TD G QD LG D LA + I +G FV GT+V GEHG L I++DG+Y Y N + +VG+VD F+Y+L+HP+G +DTANL++RI+S DA IW +D +A A + A ND D+A + + T++ +AI+Y+ L G T +T +FS+ E+T DL++ + +L +LLD++ F L+++ G+ LV L+DL+G+ +S+ ++GL++G YRL+V+N +SL ++ D ++TTD TEF G V GNI+ D LGS T+LSV++ G FV+P G VI G+YG L I ANGDY Y P + SIG+T+TFTYQL HPNG T Sbjct: 333 VQAYDDIAVTTVDISPVTTLRSDNETNNVLLNIGNFTDTYDFQIADGVTSDATFNVNVGGLVGVLTNATASLEVNVNGTWTEVGNSSSGGLLDLIGLAGQGVQITASDLEAGAYRLTFSGGGLVGAVTTIDLDANFVDSSLTDFVGVSGPAATGNLLTDAGP-GGGQDVLGPDGLAVLQILDGNGTFVTVTDGTIVAGEHGTLVINSDGSYSYEANDNPTAVGQVDDFQYRLLHPNGDSDTANLFVRIESPDATTIWSSADLAADATVMTAVNDIDQAFVSRAFLETSSFVDNAIDYTRGL------FGTTGNTTYDFSVAEDTQADLSLDVSSSALLNLLDTLSFNLYEIV-GGNPVLVGTSGSGGLIDLVGLSGSSIRAMIDGLDSGTYRLEVNNSG-ISLGTRITADATFQTTDFTEFVPGTVIAAQGNILDGSESGGQADTLGSDLTSLSVLDGNG-FVLPDADGQVIVGDYGSLTIFANGDYYYEPVPSLASIGQTDTFTYQLLHPNGST 837
BLAST of mRNA_E-siliculosus-1a_F_contig10938.647.1 vs. uniprot
Match: UPI001E357F24 (VCBS domain-containing protein n=1 Tax=Pigmentiphaga sp. NML080357 TaxID=2008675 RepID=UPI001E357F24) HSP 1 Score: 377 bits (968), Expect = 2.390e-118 Identity = 213/477 (44.65%), Postives = 300/477 (62.89%), Query Frame = 1 Query: 394 TYEFEVAQGSKTDVSFSADVGGLLSVLDNAYVDLEVFENGEWVSLADSSSSGLLDLLGIFGENAQVEASGLEAGEYRIVYGGGGLVGLATNVDWSAEFTDNSLTDFEGVPGDPITGNVITDPSFIEGEQDQLGVDDLATVHIQ-VDGEFV--DAGTGTVVVGEHGQLTIDADGNYEYIPNGD--VESVGKVDSFEYQLVHPDGSTDTANLYIRIDSEDADLIWDDSDPSAPAIAVMANNDQDEAQIEVVNVVTTTTEADAIEYSWLLGIGGIVLGDTAGSTEFSLGEETLTDLTIGIDVGSLASLLDSVDFQLFKLEDDGSETLVMDMDQASLLDLIGIFPTSLELTVEGLEAGNYRLDVSNGSLVSLPGSVSVDLNYETTDLTEFTAGEVFETTGNIIAD---DVLGSTYTTLSVMNAEGEFVIPGHGGLVIEGEYGVLVIMANGDYSYVPNADMGSIGETETFTYQLTHPNGDTS 1800 T+EFE+A+G+ ++ FS D G LLS+L +Y+ L+V +NGEWV++AD+ + L+DL+G+ G+N VEA L AGEYR+VYGG G++ + V+WS SLT+F+ DP+TGNVITDPSF EG D LG DD A + ++ DG FV DA GTV+VG +G LTI DG+Y Y N + +VGKVD F+Y+LVHP D+ LY+R+DS+ DL+WDD +P A V A +A++ V V E++ I+YSWLLG GIVLG+T+GS F++ E T + + + I LASLL+ ++F L + +G+ V + L+DLIGIFPT + +E L G YRL+VSN SLVSLPG+VSV ++ + T A V GN++ DV +SV +A GE PG +V+EG YG L + A+G ++Y P A++ SIG+++ FTYQL + NG S Sbjct: 4 THEFEIAEGTLGNLEFSVDAGSLLSLLSTSYITLQVLQNGEWVNVADTENGKLIDLIGLNGDNLVVEAKDLPAGEYRVVYGGTGVLSVVQAVEWSMNLERTSLTEFDVTKADPVTGNVITDPSFGEGAPDDLGPDDAAVLQVKNADGVFVTPDA-AGTVIVGLYGTLTIKPDGSYSYQANTENAAANVGKVDVFDYKLVHPTAGEDSGKLYVRLDSDQVDLVWDDQNPGEDATVVPAVEATADAEVIVETEVEHVPESEVIDYSWLLGALGIVLGETSGSHVFTVEEGTTSTVNLDITGSGLASLLNGLEFTLEVRDANGNWVEVEGSEGGGLIDLIGIFPTQITARIEDLGPGEYRLNVSNASLVSLPGNVSVVMSQDVTHFGHEVAAGVDPAEGNVLEAAGIDVTVDGPVAVSV-DASGEVRYPGVDPVVLEGTYGTLTMHADGSWTYEPKAELDSIGQSDVFTYQLHYANGQVS 478
BLAST of mRNA_E-siliculosus-1a_F_contig10938.647.1 vs. uniprot
Match: UPI00188A89F7 (Ig-like domain-containing protein n=1 Tax=Limoniibacter endophyticus TaxID=1565040 RepID=UPI00188A89F7) HSP 1 Score: 359 bits (922), Expect = 1.720e-104 Identity = 200/507 (39.45%), Postives = 304/507 (59.96%), Query Frame = 1 Query: 283 VALDDLATAEVGIIPVSESRSDSGTDTVLVNIGSTTNTYEFEVAQGSKTDVSFSADVGGLLSVLDNAYVDLEVFE-NGEWVSLADSSSSGLLDLLGIFGENAQVEASGLEAGEYRIVYGGGGLVGLATNVDWSAEFTDNSLTDFEGVPGDPITGNVITDPSFIEGEQDQLGVDDLATVHIQVDGEFVDAGTGTVVVGEHGQLTIDADGNYEYIPNGDVESVGKVDSFEYQLVHPDGSTDTANLYIRIDSEDADLIWDDSDPSAPAIAVMANNDQDEAQIEVVNVVTTTTEADAIEYSWLLGIGGIVLGDTAGSTEFSLGEETLTDLTIGIDVGSLASLLDSVDFQLFKLEDDGSETLVMDMDQASLLDLIGIFPTSLELTVEGLEAGNYRLDVSNGSLVSLPGSVSVDLNYETTDLTEFTAGEVFETTGNIIADDVLGSTYTTLSVMNAEGEFVIPGHGGLVIEGEYGVLVIMANGDYSYVPNADMGSIGETETFTYQLTHPNGDTS 1800 +A +D+ + + + PV+ + + S + + L+N+GS ++ +EF VA G++ D +F V GLL +L NA L V +G+W + S GLL+L G+ + +V A LEAG YR+V+GGGGL GL T V +A +SLT F + G+ ITGNV+T D LG + FV+ GT V G++G LTI+ DG++ Y P+ D SVG+VD F Y++ P+G T TA++Y++I S D W+ +DP PA A +D D A I++VN VTTTT ++AI YSWLLG+ G+ +G T+G+ FS+ T+TD TI I+ G L SLLD+++FQ+ ++ + S T++ Q + LDL+ + +L + ++ L GNYRL V NG ++S+ G+V+V + + TDL + AG TGN++ DDV S + + + A G + PG G+ + G +G L I A+GDY Y P A IG T+ FTY++ +PNG +S Sbjct: 871 IANNDIFSPTIDLSPVTTTVTASQSRSALINVGSFSDRFEFAVAAGTEGDATFDIGVTGLLGLLTNASAQLFVQRPDGQWELVGASGDGGLLELAGLANQGIRVTAQDLEAGNYRLVFGGGGLAGLGTTVSVNASIVQSSLTQFTAI-GEQITGNVLTGTDG--NPPDSLGGGTPVFQIAVSENNFVEVVDGTQVQGQYGTLTINVDGSFTYAPDNDPASVGQVDIFTYRIDGPNG-TSTASIYMQIGSPDVTATWNSNDPGQPATLTGAVSDNDTALIQLVNPVTTTTVSNAISYSWLLGLLGVNIGQTSGTYNFSVASNTMTDATISINAGGLLSLLDTINFQVLRVNANNSTTVLYTRAQLAALDLVDLVGNNLVVNLQDLGPGNYRLAVQNGGVLSVAGAVNVGIEFNATDLGQLVAGPTTAATGNVLEDDVFASALSVMQIQTAPGVWTTPGANGVTVTGAHGSLQIFADGDYIYTPTAATTGIGTTDVFTYRIYNPNGSSS 1373
BLAST of mRNA_E-siliculosus-1a_F_contig10938.647.1 vs. uniprot
Match: UPI0016221632 (hypothetical protein n=1 Tax=Sphingomonas desiccabilis TaxID=429134 RepID=UPI0016221632) HSP 1 Score: 338 bits (868), Expect = 1.030e-102 Identity = 210/511 (41.10%), Postives = 295/511 (57.73%), Query Frame = 1 Query: 283 VALDDLATAEVGIIPVSESRSDSGTDTVLVNIGSTTNTYEFEVAQGSKTDVSFSADVGGLLSVLDNAYVDLEVFENGEWVSLADSSSSGLLDLLGIFGENAQVEASGLEAGEYRIVYGGGGLVGLATNVDWSAEFTDNSLTDFEGVPGDPITGNVITDPSFIEGEQDQLGVDDLATVHIQVDGEFVDAGTGTVVVGEHGQLTIDADGNYEYIPNGDVESVGKVDSFEYQLVHPDGSTDTANLYIRIDSEDADLIWDDSDPSAPAIAVMANNDQDEAQIEV-VNVVTTTTEADAIEYSWLLGIGGIVLGDTAGSTEFSLGEETLTDLTIGIDVGSLASLLDSVDFQLFKLEDDGSETLVMDMDQASLLDLIGIFPTSLELTVEGLEAGNYRLDVSNGSL---VSLPGSVSVDLNYETTDLTEFTAGEVFETTGNIIA---DDVLGSTYTTLSVMNAEGEFVIPGHGGLVIEGEYGVLVIMANGDYSYVPNADMGSIGETETFTYQLTHPNGD 1794 +A DD+ T +V + P +R ++ +V +N+GS ++++ FEV G+ TD +F VGGL VL NA LEV + WV + D+S G+LDLL + G V A L+AG YR+ YGGGG +G+ T V+ +AE D SLT+FE V +TGNV + G D+ G D A + + V G +V GT V GE G L I+ DG++ Y P+ + +G+VDSF Y+L PDGS++ A L +R+DS DAD+IWDD D AP AV+A D EA I + V TT A+AI Y+ +L GG + +F++ E T D T+ + S+ +LL + F L + +G V D SL+DL+G+ + ++ L AG+YR+ VSNG L ++ GS +V Y L E A +V TTGN++ D LGS T L + EG +V PG GG + G++GVLVI ANGD++Y P D IGET+ FTYQL HPNGD Sbjct: 1 MAYDDVVTVQVDVTPEVTTRLETDGTSVTLNVGSFSDSFLFEVPSGAVTDATFEVTVGGLAGVLPNATAVLEVQTDTGWVRVGDASQGGVLDLLTVAGRGFTVTAEDLQAGNYRLTYGGGGTLGIGTTVNLTAELADTSLTNFEVVSAPAVTGNVFA--ASDAGLADERGPGDGAVLEVLVGGTYVAVTAGTEVTGEFGILEINPDGSFTYTPDVEAGDIGQVDSFGYRLTGPDGSSE-ATLNVRLDSPDADIIWDDIDFGAPGTAVVAVGDTAEAGIVLGPRVGDPTTNANAIGYTSVL-TGG------RDTYDFAVSENTTADFTLDVRSSSVLNLLGNTTFTLQQFT-NGRWVTVTDGSGGSLIDLVGLTGGGVRAVIDDLTAGSYRVTVSNGGLGLITTITGSATVQTTY----LNELEARDVVATTGNVLTGADQDFLGSEQTVLRIEQGEGVYVAPGFGGERVVGDHGVLVIQANGDFTYTPFEDDAGIGETDRFTYQLVHPNGD 496 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10938.647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10938.647.1 >prot_E-siliculosus-1a_F_contig10938.647.1 ID=prot_E-siliculosus-1a_F_contig10938.647.1|Name=mRNA_E-siliculosus-1a_F_contig10938.647.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=730bp DADADADADADADADADADADADADADADADADADADADADADADADADAback to top mRNA from alignment at E-siliculosus-1a_F_contig10938:3..2192- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10938.647.1 ID=mRNA_E-siliculosus-1a_F_contig10938.647.1|Name=mRNA_E-siliculosus-1a_F_contig10938.647.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2190bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10938:3..2192- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10938:3..2192- >mRNA_E-siliculosus-1a_F_contig10938.647.1 ID=mRNA_E-siliculosus-1a_F_contig10938.647.1|Name=mRNA_E-siliculosus-1a_F_contig10938.647.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4380bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10938:3..2192- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |