mRNA_E-siliculosus-1a_F_contig1093.645.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1093.645.1 vs. uniprot
Match: A0A6H5L7S8_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7S8_9PHAE) HSP 1 Score: 1499 bits (3880), Expect = 0.000e+0 Identity = 797/869 (91.71%), Postives = 819/869 (94.25%), Query Frame = 1 Query: 28 MLLARRRLLPSGRGRLATPCCKLWLPERRDAEASRVAQASREIRAARHLPMGRSCCISTGTAGALSHRQLECGCAFLGKARSVGGLRLLHGTSRAAAKAKLGHGARKETPTIPSFIEIRELASLLRVKPRAVFKSMGGYQEKKKHRIVLSGVPYAFPNLGNVVAPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEGLPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSGIADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVS--------------AVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRVSLADALSQTFPPKERVLPTMADAEDFGLQPSQSETSPDLGIPRVDPDPAPPVGPTGSEVAVAAGVHSAEGGSATGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLRPGDPFVSGMLWGFVRSIYDEEGDKLLEHAGSGVAAKVVIIARTRVSNAPLGEPFRVLTKEAAEKVAQVRLLARTIDNFIDHNKLDREFAHLLGGDEDDDDQSYDGSNEDDQPGRPAEQPDGTGDDVDYSETTLRSTARSPKPSNRQRSNLEQEEELAPEDMPVTIVVKTDNANTLASVLDALGDWGDVENPTENVGEQLAAEASDSNPEGVLERVRRRQPQEWGEGDLQHKQRRRLLVSVAHSGVGAVTSSDVRLARDCECPVFAHNVRTDASATRELKRVGGGVVPALPEGAAVVVGEEVSVGIGGQEGFIGRAGEGRECVVVSETVGELLGEIERFVLRVR 2592
MLLARRRLLPSGRGRLA PCCKLWLP+RRDAEAS VAQASREIRA RHLP G S C STGTAGALSHRQLEC CAFLGKARSVGGLRL HGTSRAAAKAKLG GAR ETP IPSFIEIRELASLLRVKPRA+FKSMGGYQEKKKHRIVLSGVPYAFPNLGNVV PFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEG PAGQGRRPVVVLLGHFNHGKTTILDALRGPSSGIADREPGGITQEIRARTVSLEPTSGETAQ+TNDDD AAS RSRSAKVAT+LDTPGQEIFYRMRTNGARVADAVVLVVS AVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLP+EVAAQRVKELSAEVRE+VAIQDAKVLPLSAHTGFGLDNLR SLADAL+Q+FP KERV PTMAD E FGLQP QSET PDLGIP VDPDPAPPV PT SEVAVAAGVHSAEGGSA GVEVVMAEAPEGAATGTVLDYTSSAKTGK+LLVLVDRGVLRPGDPFVSGMLWGFVRSIYDEEGDKLLEHAGSGVAAKVVIIARTRVS+APLGEPFRVLTKEAAE+VAQVRLLARTIDNF+DHNKLDR FAHLL GDEDDDD S+DGS+EDDQPGRPAEQP GTGDDVDYSETTL+STARSP+PS+R+RSNLEQ+EELAPEDMPVTIVVKTDNANTLASVLDALGDWGDV+N TENVGEQLAAEASDSNPEGVLERVRR++PQEW E DLQHKQRRRLLVSVAHSGVGAVTSSDVRLARDCECPVFAHNVRTDASATRELKRVGGGVVPALPEGAA VGEEVSVGIGGQEGFIGRAGEGRECVVVSETVGELLGEIERFVLRVR
Sbjct: 1 MLLARRRLLPSGRGRLAAPCCKLWLPDRRDAEASHVAQASREIRATRHLPRGHSFCTSTGTAGALSHRQLECECAFLGKARSVGGLRLFHGTSRAAAKAKLGRGARTETPAIPSFIEIRELASLLRVKPRALFKSMGGYQEKKKHRIVLSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEGRPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSGIADREPGGITQEIRARTVSLEPTSGETAQNTNDDDGAASLRSRSAKVATILDTPGQEIFYRMRTNGARVADAVVLVVSVALCANFVLVSVSAAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPNEVAAQRVKELSAEVREYVAIQDAKVLPLSAHTGFGLDNLRTSLADALNQSFPQKERVYPTMADLEGFGLQPGQSETFPDLGIPGVDPDPAPPVRPTESEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKMLLVLVDRGVLRPGDPFVSGMLWGFVRSIYDEEGDKLLEHAGSGVAAKVVIIARTRVSDAPLGEPFRVLTKEAAEQVAQVRLLARTIDNFVDHNKLDRGFAHLLRGDEDDDDLSHDGSDEDDQPGRPAEQPVGTGDDVDYSETTLKSTARSPEPSSRRRSNLEQQEELAPEDMPVTIVVKTDNANTLASVLDALGDWGDVDNSTENVGEQLAAEASDSNPEGVLERVRRKKPQEWREDDLQHKQRRRLLVSVAHSGVGAVTSSDVRLARDCECPVFAHNVRTDASATRELKRVGGGVVPALPEGAAAAVGEEVSVGIGGQEGFIGRAGEGRECVVVSETVGELLGEIERFVLRVR 869
BLAST of mRNA_E-siliculosus-1a_F_contig1093.645.1 vs. uniprot
Match: A0A835Z5U4_9STRA (Tr-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U4_9STRA) HSP 1 Score: 257 bits (656), Expect = 5.820e-70 Identity = 247/820 (30.12%), Postives = 336/820 (40.98%), Query Frame = 1 Query: 361 IPSFIEIRELASLLRVKPRAVFKSMGGYQEKKKHRIVLSGVPYAFPNLGNVVAPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEGLPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSGIADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKV--------------------------------------------------------------ATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLL------------PDE-----------------VAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRVSLADALSQTFPPKERVLPTMADAEDFGLQPSQSETSPDLGIPRVDPDPAPPVGPTGSEVAVAA--GVHSAEGGSATGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLRPGDPFVSGMLWGFVRSIYDEEGDKLLEHAGSGV-AAKVVIIARTRVSNAPLGEPFRVLTKEAAEKVAQVR----LLARTIDNFIDHNKLDREFAHLLGG-----------------------------------------DEDDDDQSYDGSNEDDQPGRPAEQPDGTGDDVDYSETTLRSTARSPKPSNRQRSNLEQEEELAPEDMPVTIVVKTDNANTLASVLDALGDWGDVENPTENVGEQLAAEASDSNPEGVLERVRRRQPQEWGEGDLQHKQRRRLLVSVAHSGVGAVTSSDVRLARDCECPVFAHNVRTDASATRELKR 2403
+ + I +ELA LRV +A FK++GG + ++K+ + L P++FP+L + P++DA A L +E+++L E P R P P G PVVVLLGHFNHGKTT+LDAL GP S IA E GITQEIRARTV L +D D AT LDTPGQ+IFYRMR GA VAD V+VVSAVDGVC QT ESIGC ++LGLPAVV + K+DL+ P E +A QRV++L+ E+ EFVA+ A V+P+SA TG G+D+LR +++ LS+ V D G E+ + D + AA G AEG + E A +V+DY +S + G + +LV G L PG FV+G WG++R++YDE G AA+V + PLGEPF V+ E A A LAR D L+ + A + DE D+ G ++ D A+ + D + LR R + E EL + +V+K D AN+LA++LDA+ + D+ Q+ A A+ + R R P L K + + V +G+G VT SDVR A CPVFA N R DA R +R
Sbjct: 3 LQAIIGYKELAKALRVNAKAAFKALGGVRARRKYHLPLQCGPHSFPSLAAAIVPYEDAVKAAAALKREVQYLATEPAPME----------RRP------PRGPPEAPVVVLLGHFNHGKTTLLDALLGPDSRIAAGEACGITQEIRARTVQL----------LDDADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATFLDTPGQDIFYRMRAGGAEVADLAVVVVSAVDGVCQQTGESIGCLDDLGLPAVVAVTKVDLVAGGGRRRRETKEPFEQSAPHVHVARSLTHACSLATQRVRKLARELHEFVALNGAPVVPVSAVTGAGMDDLRRTISAVLSEQMQAGAAV--------DIGSSGGGGESESAADVAATGSDACEGTNGVRATXXXAADPGGRPAEGAVTAKIAAAXXXXAE-PAQASVIDYVTSPQLGARMTLLVHAGALAPGAHFVTGGAWGYIRAVYDEVGGAXXXXXXXXXXAAQVAVKLLGGARQVPLGEPFTVMPAERARTAAHTHRLADALARHASRGRDRAVLEPDAAATVXXXXXXXXXXXXXXXXXRFARDDWEXXXXXXXXXXXXXEGDVLDEGDEGDWAAGESDADAELALADGAERGVDGDGGASGALRDGERGAEEQGEXXXXXXXEPEL----LCTPVVLKADTANSLAALLDAIDENRDI---------QVGAAAAAAQLVYSKRTYRERAP-------LYGKAKLVAMDMVISAGIGIVTESDVRAADAARCPVFAFNARADAGGRRLARR 767
BLAST of mRNA_E-siliculosus-1a_F_contig1093.645.1 vs. uniprot
Match: A0A662XFN4_9STRA (Tr-type G domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XFN4_9STRA) HSP 1 Score: 188 bits (478), Expect = 5.590e-47 Identity = 153/491 (31.16%), Postives = 225/491 (45.82%), Query Frame = 1 Query: 340 ARKETPTIPSFIEIRELASLLRVKPRAVFKSMGGYQEKKKHRIVLSGVPYAFPNLGNVVAPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEGLPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSG----IADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPD--EVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRVSLADALSQTFPPKERVLPTMADAEDFGLQPSQSETSPDLGIPRVDPDPAPPVGPTGSEVAVAAGVHSAEGGSATGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLRPGDPFVSGMLWGFVRSIYDEEGDKLLEHAGSGVAAKVVIIARTRVSNAPLGEPFRVLTKEAAEKVAQVRLLARTIDN 1794
ARK+ P +P+FI +R+LA L V K + ++ + P F ++ +V PF+ AQ VA LG E+ + D+E + S S W R+PV+ ++GH +HGKTT++D LR ++ +A E GITQ+I +L P AT LDTPG F+RMR++ A+VADAV+L+V+A +GV LQT ESIG E+ GLP V+ +NK+DLL + +V + E+R FVA+QD VL +SA TG GLD LR ++ + +++ +AD VG PE A G VL+ + G VL VL+ G L FV+GM+ G VRSI D EG +L + A G V +++ +AP F VL + A++V + R LA +++
Sbjct: 80 ARKQPPVLPAFIRVRDLAKALHRPLDVVLKRVVTRANRRFRLKAVDHPPAEFRSVKEIVLPFRVAQDVAAQLGIEVAYDDVEP------TFSDSSTSSEATWRR-------RQPVIAVMGHVDHGKTTLMDTLRKQTNSGLRQLAPYEKHGITQKINVCEATLAPDVR----------------------ATFLDTPGHFHFFRMRSSAAQVADAVLLIVAADEGVLLQTEESIGAIEDAGLPTVICINKVDLLEGGGTDSTSQVNAVVDELRSFVALQDCPVLQISAKTGAGLDELRHTVGELVAE-----------LADRHKLDAL----------------------VG------------------------------PETHAEGLVLESVALRGRGTVLRVLLKHGELAARQHFVAGMIHGVVRSIRDAEGREL-KRALPGTVVDVTYSNKSKNVDAPNEHGFFVLPEARAKQVVEQRQLALELED 471
BLAST of mRNA_E-siliculosus-1a_F_contig1093.645.1 vs. uniprot
Match: M4BGI0_HYAAE (Tr-type G domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGI0_HYAAE) HSP 1 Score: 185 bits (470), Expect = 4.010e-46 Identity = 153/485 (31.55%), Postives = 229/485 (47.22%), Query Frame = 1 Query: 340 ARKETPTIPSFIEIRELASLLRVKPRAVFKSMGGYQEKKKHRIVLSGVPYAFPNLGNVVAPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEGLPAGQGRR-PVVVLLGHFNHGKTTILDALRG----PSSGIADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRVSLADALSQTFPPKERVLPTMADAEDFGLQPSQSETSPDLGIPRVDPDPAPPVGPTGSEVAVAAGVHSAEGGSATGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLRPGDPFVSGMLWGFVRSIYDEEGDKLLEHAGSGVAAKVVIIARTRVSNAPLGEPFRVLTKEAAEKVAQVRLLA 1779
AR + P IP+FI +R+LA LR V K ++ H + P F + +V PF+ AQ VA+ LG ++ + D+E P+ +L+ D+ + GRR PV+ ++GH +HGKTT++D LR IA E GITQ+I +L T+D AT LDTPG F+RMR++ A+VADA +L+V+A +GV LQT ESIG EE LPA++ +NK+DLL ++ +RV ++ E+R FVA++D+ VL +S TG GLD LR ++ + +S+ +R L + GS T E G VL+ + G VL VL+ G L FV+GM+ G VRS+ D EG + ++ A G + +++ +AP F VL + A++V + R LA
Sbjct: 60 ARNQPPVIPAFIRVRDLAKALRQPLDKVLKHTVIKSNRRFHLRTKNHPPAEFKGVKQIVLPFRVAQEVAEQLGVQVAYDDVE--PELLDVLSSCDEEKC----------LGRRQPVIAVMGHVDHGKTTLMDTLRSYMKTSKKMIAPYEKQGITQKINVCEATL----------THD------------VKATFLDTPGHFHFFRMRSSAAQVADAALLIVAADEGVLLQTEESIGAIEETRLPALICINKVDLLGED-GDKRVADIVEELRSFVALKDSPVLIISGKTGAGLDGLRHTVRELVSEL--ASDRKLDALV-------------------------------------------------GSQTHAE------------GLVLESVALKGRGTVLRVLIKNGELVAKQHFVAGMIHGVVRSMQDAEG-RDVKRALPGTVVDITYSNKSKNVDAPNEHGFFVLPEPRAKQVLEQRELA 445
BLAST of mRNA_E-siliculosus-1a_F_contig1093.645.1 vs. uniprot
Match: A0A662Y5I4_9STRA (Tr-type G domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y5I4_9STRA) HSP 1 Score: 189 bits (480), Expect = 7.250e-46 Identity = 153/491 (31.16%), Postives = 228/491 (46.44%), Query Frame = 1 Query: 340 ARKETPTIPSFIEIRELASLLRVKPRAVFKSMGGYQEKKKHRIVLSGVPYAFPNLGNVVAPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEGLPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSG----IADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEV--AAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRVSLADALSQTFPPKERVLPTMADAEDFGLQPSQSETSPDLGIPRVDPDPAPPVGPTGSEVAVAAGVHSAEGGSATGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLRPGDPFVSGMLWGFVRSIYDEEGDKLLEHAGSGVAAKVVIIARTRVSNAPLGEPFRVLTKEAAEKVAQVRLLARTIDN 1794
AR++ P +P+FI +R+LA L V K + ++ V+ P F ++ +V PF+ AQ VA LG E+ + D+E + S S W R+PV+ ++GH +HGKTT++D LR ++ +A E GITQ+I +L P AT LDTPG F+RMR++ A+VADAV+L+V+A +GV LQT ESIG E+ GLP V+ +NK+DLL + + +V + E+R FVA+QD VL +SA TG GLD LR ++ + +++ +AD H +G PE A G VL+ + G VL VL+ G L FV+GM+ G VRSI D EG +L + A G V +++ +AP F VL + A++V + R LA +++
Sbjct: 80 ARQQPPVLPAFIRVRDLAKALHRPLDVVLKRVVTRANRRFRLKVVDHPPAEFRSVKEIVLPFRVAQDVAAQLGIEVAYDDVEP------TFSDSSTSSEATWRR-------RQPVIAVMGHVDHGKTTLMDTLRKQTNSGLRQLAPYEKHGITQKINVCEATLAPDVR----------------------ATFLDTPGHFHFFRMRSSAAQVADAVLLIVAADEGVLLQTEESIGAIEDAGLPTVICINKVDLLEEGGVDSKSQVDAVVDELRSFVALQDCPVLQISAKTGAGLDGLRHTVGELVAE-----------LADQ------------------------------------------HKLDG----------LVGPETHAEGLVLESVALKGRGTVLRVLLKHGELAVKQHFVAGMIHGVVRSIRDAEGREL-KRALPGTVVDVTYSNKSKNVDAPNEHGFFVLPEARAKQVVEQRQLALELED 471
BLAST of mRNA_E-siliculosus-1a_F_contig1093.645.1 vs. uniprot
Match: A0A225UL88_9STRA (Translation initiation factor IF-2 (Fragment) n=3 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UL88_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.850e-44 Identity = 142/439 (32.35%), Postives = 208/439 (47.38%), Query Frame = 1 Query: 340 ARKETPTIPSFIEIRELASLLR-----VKPRAVFKSMGGYQEKKKHRIVLSGVPYAFPNLGNVVAPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEGLPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSG----IADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRVSLADALSQTFPPKERVLPTMADAEDFGLQPSQSETSPDLGIPRVDPDPAPPVGPTGSEVAVAAGVHSAEGGSATGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLRPGDPFVSGMLWGFVRSIYDEEG 1629
AR + P IP+FI +R+LA LR V R V K+ +Q K K+ P F ++ ++V PF+ AQ VA+ ++ + D+E + D+ A EE + R+PV+ ++GH +HGKTT++D LR IA E GITQ+I +L S AT LDTPG F+RMR++ A+VADAV+L+V+A +GV LQT ESIG EE GLPA++ +NK+DLL ++ ++V+ + E+R FVA+QD+ VL +S TG GLD+LR ++ + +S T+AD + ++ P A G VL+ + G VL VL+ G L FV+GM+ G VRS+ D EG
Sbjct: 69 ARSQPPVIPAFIRVRDLAKALRQPLDKVLKRTVTKANRRFQLKSKNH-----PPAEFRSVKHIVLPFRVAQEVAETFDIQVAYDDVEPE---------LSDASADYEEEFVGV---RQPVIAVMGHVDHGKTTLMDTLRKQMKAGLKQIAPYEKHGITQKINVCEATL----------------------TSDVKATFLDTPGHFHFFRMRSSAAQVADAVLLIVAADEGVLLQTEESIGAIEEAGLPAIICINKVDLLGED-GDKQVENIVDELRSFVALQDSPVLMISGKTGAGLDDLRHTVWELVS-----------TLADDNKL--------------------------------------------------DALIGSKPH--AEGLVLESVALKGRGTVLRVLIKNGELVTKQHFVAGMIHGVVRSMRDAEG 404
BLAST of mRNA_E-siliculosus-1a_F_contig1093.645.1 vs. uniprot
Match: H3GSC9_PHYRM (Tr-type G domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSC9_PHYRM) HSP 1 Score: 181 bits (460), Expect = 2.150e-43 Identity = 139/434 (32.03%), Postives = 203/434 (46.77%), Query Frame = 1 Query: 340 ARKETPTIPSFIEIRELASLLRVKPRAVFKSMGGYQEKKKHRIVLSGVPYAFPNLGNVVAPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEGLPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSG----IADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRVSLADALSQTFPPKERVLPTMADAEDFGLQPSQSETSPDLGIPRVDPDPAPPVGPTGSEVAVAAGVHSAEGGSATGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLRPGDPFVSGMLWGFVRSIYDEEG 1629
AR + P +P+FI +R+LA LR V K + +K + P F ++ ++V PF+ AQ VA+ G ++ + D+E + A++ E L R+PVV ++GH +HGKTT++D LR + +A E GITQ+I +L P AT LDTPG F+RMR++ A+VADAV+L+V+A +GV LQT ESIG EE GLPAV+ +NK+DLL E +++V + E+R FVA+QD+ VL +S TG GLD+LR ++ + ++ A+D L PE A G VL+ + G VL VL+ +G L P FV+GM+ G VR + D EG
Sbjct: 72 ARSQPPAVPAFIRVRDLAKALRQPVDKVLKLVVTKNNRKFQLKAKNHPPAEFRSVKHIVLPFRVAQDVAEQFGMQVAYDDVEPELSDASV---------GFDERFLGV---RQPVVAVMGHVDHGKTTLMDTLREQMNTGLKQLAPYEKNGITQKINVCEAALTPD----------------------LKATFLDTPGHFHFFRMRSSAAQVADAVLLIVAADEGVLLQTEESIGAIEEAGLPAVICINKVDLL-GEAGSEQVDSIVDELRSFVALQDSPVLTISGKTGAGLDDLRHTVRELVTGL-------------ADDHKLD--------------------------------------------------ALVGPEPHAEGLVLESVALKGRGTVLRVLIKQGELSPKQHFVAGMIHGVVRGMSDAEG 407
BLAST of mRNA_E-siliculosus-1a_F_contig1093.645.1 vs. uniprot
Match: A0A6A4FLN7_9STRA (Tr-type G domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FLN7_9STRA) HSP 1 Score: 173 bits (439), Expect = 6.270e-42 Identity = 148/440 (33.64%), Postives = 212/440 (48.18%), Query Frame = 1 Query: 340 ARKETPTIPSFIEIRELASLLR-----VKPRAVFKSMGGYQEKKKHRIVLSGVPYAFPNLGNVVAPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEGLPAGQG-RRPVVVLLGHFNHGKTTILDALRGPSSG----IADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRVSLADALSQTFPPKERVLPTMADAEDFGLQPSQSETSPDLGIPRVDPDPAPPVGPTGSEVAVAAGVHSAEGGSATGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLRPGDPFVSGMLWGFVRSIYDEEG 1629
AR + IP+FI +R+LA +R V R V KS +Q K K P F ++ ++V PF+ AQ VA+ G ++ + D+E PQ I A SD +P G R+PV+ ++GH +HGKTT++D LR IA E GITQ+I +L P AT LDTPG F+RMR++ A+VADAV+L+V+A +GV LQT ESIG EE GLPAV+ +NK+DLL +E ++V+++ E+R F+A+QD+ VL +S TG GLD+L+ ++ ++ GL Q R+D +V ++ P A G VL+ + G VL VL+ G L FV+GM+ G VRS+ D EG
Sbjct: 81 ARAQPRAIPAFIRVRDLAKAIRQPLDKVLKRVVTKSNRRFQLKAKDH-----PPAEFRSVKHIVLPFRVAQEVAEQFGVQVAYDDVE--PQ--LIDAASD----------VPELLGVRQPVIAVMGHVDHGKTTLMDTLRHQMKAGLKQIAPFEKHGITQKINVCEAALTPD----------------------VKATFLDTPGHFHFFRMRSSAAQVADAVLLIVAADEGVLLQTEESIGAIEEAGLPAVICINKVDLLGEE-GDEQVEKIVDELRSFLALQDSPVLTISGKTGAGLDDLKHTVWGLVA-------------------GLADEQ----------RLD-------------------------------AMVGSDTP---AQGLVLESVALKGRGTVLRVLIKNGELAAKQHFVAGMIHGVVRSMRDAEG 415
BLAST of mRNA_E-siliculosus-1a_F_contig1093.645.1 vs. uniprot
Match: A0A2D4C6L0_PYTIN (Tr-type G domain-containing protein (Fragment) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6L0_PYTIN) HSP 1 Score: 171 bits (433), Expect = 1.620e-41 Identity = 117/294 (39.80%), Postives = 157/294 (53.40%), Query Frame = 1 Query: 349 ETPTIPSFIEIRELASLLRVKPRAVFKSMGGYQEKKKHRIVLSGVPYAFPNLGNVVAPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEGLPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSGIADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLL-PDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRVSLA 1227
+ P +PSFI +R+LA LL++ V + + + ++ H + L G + F + +V PF AQ VA G+ +RF D+E P AA L RA G+ R+PVV ++GH +HGKTT++DALR S IA E GITQ+I L P A A LDTPG FYRMR + A++AD VVL+V+A +G LQT ESIG E LP V +NKID+ P ++AA R E+R FVA+Q +L +SA TG LD LR LA
Sbjct: 35 QEPLVPSFIRVRDLAKLLKLPVDDVVRKVATRRNRRFH-MTLDGDRFEFKTVKEIVLPFALAQDVAAQFGRAVRFEDVEPAPLDAAQL------RALRSATGIETAT-RQPVVAVMGHVDHGKTTLMDALR--QSRIAQSEAHGITQKINICEAQLTP----------------------ALSAMFLDTPGHFHFYRMRNSAAQLADLVVLMVAADEGCLLQTEESIGAIEASALPVVACINKIDVASPSQIAAVR-----EELRSFVALQHCPILEISAKTGENLDALRDELA 291
BLAST of mRNA_E-siliculosus-1a_F_contig1093.645.1 vs. uniprot
Match: A0A3R7MXQ2_9STRA (Tr-type G domain-containing protein (Fragment) n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MXQ2_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.050e-41 Identity = 150/439 (34.17%), Postives = 207/439 (47.15%), Query Frame = 1 Query: 343 RKETPTIPSFIEIRELASLLR-----VKPRAVFKSMGGYQEKKKHRIVLSGVPYAFPNLGNVVAPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEGLPAGQGRRPVVVLLGHFNHGKTTILDALRGP-SSGI---ADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRVSLADALSQTFPPKERVLPTMADAEDFGLQPSQSETSPDLGIP-RVDPDPAPPVGPTGSEVAVAAGVHSAEGGSATGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLRPGDPFVSGMLWGFVRSIYDEEG 1629
R + IP++I +R+LA +R V R V KS ++ K P F + +V PF+ AQ VA ++ + D+E SD+S A G+ R+PV+ ++GH +HGKTT++D LR +SG+ A E GITQ+I +L P AT LDTPG F+RMR++ A+VADAVVLVV+A +GV LQT ESIG EE GLPAVV +NKIDLL D A +V + E+R FVA+QD+ +L +S TG GLD+LR ++++ ++ DL I ++D AVA SAEG VL+ + G VL VL+ GVL P D FV+ M+ G VR + D EG
Sbjct: 40 RNQPRAIPAYIRVRDLAKAIRQPLDKVLKRVVTKSNRVFRLNAKDH-----PPAEFRGVKQIVLPFRIAQEVATEFRVQVAYDDVEP--------VFSDESGADKESWGV-----RQPVIAVMGHVDHGKTTLMDTLRKQMNSGLRQLAPYEKHGITQKINVCEAALTPDVR----------------------ATFLDTPGHFHFFRMRSSAAQVADAVVLVVAADEGVLLQTEESIGAIEESGLPAVVCINKIDLLGDGGEA-KVDGIVDELRSFVALQDSPILTISGKTGAGLDDLRHTVSELVA------------------------------DLAIDHKLD--------------AVANPTTSAEG--------------------LVLESVALKGRGTVLRVLIKHGVLAPKDHFVANMIHGVVRGMSDAEG 373 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1093.645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1093.645.1 >prot_E-siliculosus-1a_F_contig1093.645.1 ID=prot_E-siliculosus-1a_F_contig1093.645.1|Name=mRNA_E-siliculosus-1a_F_contig1093.645.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=856bp MLLARRRLLPSGRGRLATPCCKLWLPERRDAEASRVAQASREIRAARHLPback to top mRNA from alignment at E-siliculosus-1a_F_contig1093:9088..20750- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1093.645.1 ID=mRNA_E-siliculosus-1a_F_contig1093.645.1|Name=mRNA_E-siliculosus-1a_F_contig1093.645.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11663bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1093:9088..20750- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1093:9088..20750- >mRNA_E-siliculosus-1a_F_contig1093.645.1 ID=mRNA_E-siliculosus-1a_F_contig1093.645.1|Name=mRNA_E-siliculosus-1a_F_contig1093.645.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5136bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1093:9088..20750- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |