mRNA_E-siliculosus-1a_F_contig1092.637.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1092.637.1 vs. uniprot
Match: D7FHA6_ECTSI (Similar to Calcium/calmodulin-dependent protein kinase type IV (CaMK IV) (CAM kinase-GR) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA6_ECTSI) HSP 1 Score: 248 bits (632), Expect = 6.210e-81 Identity = 120/132 (90.91%), Postives = 122/132 (92.42%), Query Frame = 1 Query: 1 MKGGSSLVRWIERAGTPEVHATKVFNTLNREHGKLFSAELRVLLSVDCPCIIKFYGLNGAWVDQNYVNLVLEAMWLGSLFDKIYVRQSSCFSCPPGVLR*RAGSDRAGGPLHNHRDERAILAIAFQIFWGLE 396 MKGGSSLVRWIERAG PE++ATKVFNTLNREHGKL SAELRVLLSVDCPCIIKFYG AW DQNYVNLVLEAMWLGSLFD IYV QSSCFSCPPGVLR RAGSDRAGGPLHNHRDERAILAI FQIFWGLE Sbjct: 1 MKGGSSLVRWIERAGKPEMYATKVFNTLNREHGKLLSAELRVLLSVDCPCIIKFYG---AWDDQNYVNLVLEAMWLGSLFDMIYVTQSSCFSCPPGVLRWRAGSDRAGGPLHNHRDERAILAIDFQIFWGLE 129
BLAST of mRNA_E-siliculosus-1a_F_contig1092.637.1 vs. uniprot
Match: D7FHA7_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA7_ECTSI) HSP 1 Score: 127 bits (320), Expect = 2.090e-33 Identity = 61/73 (83.56%), Postives = 65/73 (89.04%), Query Frame = 1 Query: 379 IFWGLE------YLHSMGIVHRDVKPSNILANTCGSVKLADFGTALPLAEKTNDVMGTFRYMPPESEPREKGD 579 ++WG + YLHSMGIVHRDVKPSNILANTCGSVKLADFGTALPLAEKTNDVMGTFRYMPPE+ PREKGD Sbjct: 15 LYWGAKIRRHKGYLHSMGIVHRDVKPSNILANTCGSVKLADFGTALPLAEKTNDVMGTFRYMPPENAPREKGD 87
BLAST of mRNA_E-siliculosus-1a_F_contig1092.637.1 vs. uniprot
Match: A0A7S1Y109_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y109_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 9.070e-19 Identity = 61/187 (32.62%), Postives = 85/187 (45.45%), Query Frame = 1 Query: 4 KGGSSLVRWIERAGTPEVHATKVFNTLNREHGKLFSAELRVLLSVDCPCIIKFYGLNGAWVDQNYVNLVLEAMWLGSLFDKIYVRQSSCFSCPPGVLR*RAGSDRAGGPLHNHRDERAILAIAFQIFWGLEYLHSMGIVHRDVKPSNILANTCGSVKLADFGTALPLAEKT---NDVMGTFRYMPPE 555 +G SS+V T A K+ N ++ E+ L CP +I F+G A+ + + + LE M GSL + + GP+ E+ + +AFQI WGL YLH VHRD+KPSNIL N+ G VK+ DFG + LA +GTF+YM PE Sbjct: 78 RGSSSVVVRATHRATRTPVALKIINMFDKSKRSQLLREIGTLYDAQCPSLISFFG---AFYREGAITIALEYMDGGSLSNVL----------------------AQAGPI----PEQPLANVAFQILWGLAYLHHENRVHRDIKPSNILINSNGQVKITDFGISAELANSIAMCGTFVGTFKYMSPE 235
BLAST of mRNA_E-siliculosus-1a_F_contig1092.637.1 vs. uniprot
Match: B8LCN8_THAPS (Protein kinase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCN8_THAPS) HSP 1 Score: 92.8 bits (229), Expect = 9.300e-19 Identity = 66/172 (38.37%), Postives = 91/172 (52.91%), Query Frame = 1 Query: 85 NREHGKLFSAELRVLLSV------DCPCIIKFYGLNGAWVDQN--YVNLVLEAMWLGSLFDKIYVRQSSCFSCPPGVLR*RAGSDRAGGPLHNHRD--ERAILAIAFQIFWGLEYLHSMGIVHRDVKPSNILANTCGSVKLADFGTALPLAEKTNDVM-----GTFRYMPPE 555 + E ++ ELR+L C C+++ L GA++D+N + LVLE M GSL D + + + P R S P HR E AI +IA+Q+ WGL YLH G++HRD+KP+N+L N+ G VKLADFG + + N VM GT RYM PE Sbjct: 3 SHEKRQMLLRELRLLCCTMMRGNGGCECLVE---LEGAFLDRNEGVITLVLEFMDRGSLADLRHSNTINNSNSIPTSPHFRGLSQ----PNKTHRTMPEYAIASIAYQMIWGLGYLHFEGVLHRDIKPANVLVNSIGRVKLADFG----IEDGNNAVMNTTVIGTTRYMSPE 163
BLAST of mRNA_E-siliculosus-1a_F_contig1092.637.1 vs. uniprot
Match: A0A7S1Z3W8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z3W8_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 3.440e-18 Identity = 64/165 (38.79%), Postives = 90/165 (54.55%), Query Frame = 1 Query: 85 NREHGKLFSAELRVLLSVDCPCIIKFYGLNGAWVD--QNYVNLVLEAM---WLGSLFDKIYVRQSSCFSCPPGVLR*RAGSDRAGGPLHNHRDERAILAIAFQIFWGLEYLHSMGIVHRDVKPSNILANTCGSVKLADFGTALP--LAEKTN-DVMGTFRYMPPE 555 +++ ++ ELR L S++C C++ L GA+ D + V LVLE M LGSL SS + + + R G P E+A +IA+Q+ WGL YLH ++HRDVKP N+L NT G VKL+DFG A + ++ N V+GT RYM PE Sbjct: 91 DKKRREMLLKELRSLCSLECDCLVT---LIGAFFDDDEGTVTLVLEYMDRGSLGSLLGSDPGTNSSTSNHLSLISHVESNLGRNGLP------EKATASIAYQMLWGLGYLHHENMIHRDVKPGNVLVNTRGEVKLSDFGIASQREVGQEMNVTVVGTTRYMSPE 246
BLAST of mRNA_E-siliculosus-1a_F_contig1092.637.1 vs. uniprot
Match: A0A7S0SXD7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXD7_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.360e-17 Identity = 64/187 (34.22%), Postives = 89/187 (47.59%), Query Frame = 1 Query: 4 KGGSSLVRWIERAGTPEVHATKVFNTLNREHGKLFSAELRVLLSVDCPCIIKFYGLNGAWVDQNYVNLVLEAMWLGSLFDKIYVRQSSCFSCPPGVLR*RAGSDRAGGPLHNHRDERAILAIAFQIFWGLEYLHSMGIVHRDVKPSNILANTCGSVKLADFGTALPLAEKT---NDVMGTFRYMPPE 555 +G SS+V + + T A KV N +R E+ L CP +I FYG A+ + + + LE M GSL + + D+ G P+ ERA+ I+FQI WGL Y+ VHRDVKPSN+L N+ G VK++DFG + L +GTF+YM PE Sbjct: 65 RGCSSIVIYGIHSPTGTPLALKVINLFDRSKRDQLIREIATLYDAQCPNLITFYG---AFYREGAITIALEYMDGGSLANVL---------------------DQVG-PI----PERALAGISFQILWGLAYMKHDKRVHRDVKPSNLLINSKGEVKVSDFGVSAELQTSIAMCGTFVGTFKYMSPE 222
BLAST of mRNA_E-siliculosus-1a_F_contig1092.637.1 vs. uniprot
Match: A0A7S2LDW5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LDW5_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 5.440e-17 Identity = 60/189 (31.75%), Postives = 98/189 (51.85%), Query Frame = 1 Query: 4 KGGSSLVRWIERAGTPEVHATKVFNTL--NREHGKLFSAELRVLLSVDCPCIIKFYGLNGAWVDQNYVNLVLEAMWLGSLFDKIYVRQSSCFSCPPGVLR*RAGSDRAGGPLHNHRDERAILAIAFQIFWGLEYLHSMGIVHRDVKPSNILANTCGSVKLADFGTALPLAEK---TNDVMGTFRYMPPE 555 +G S+V+ + T E+ A KVF+++ N ++ E++VL S++C +++ L G + ++ V +VLE M GS+ D + R + R G + + +IA+Q+ G+ +LH I+HRDVKP+N+L N+ G VKL DFG A +K V+GT RY+ PE Sbjct: 103 RGACSVVQRARHSQTKELVALKVFHSIRNNANKAEMLGKEMQVLCSLNCDSLVR---LIGGFFAEDSVTMVLEYMDQGSIEDLL-----------------RPFASRGLGFVRE-----VVASIAYQMLNGIAFLHDENILHRDVKPANVLVNSNGYVKLTDFGIATKQTQKDQLNQTVVGTTRYLSPE 266
BLAST of mRNA_E-siliculosus-1a_F_contig1092.637.1 vs. uniprot
Match: A0A835Z9W7_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W7_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.490e-16 Identity = 61/187 (32.62%), Postives = 85/187 (45.45%), Query Frame = 1 Query: 4 KGGSSLVRWIERAGTPEVHATKVFNTLNREHGKLFSAELRVLLSVDCPCIIKFYGLNGAWVDQNYVNLVLEAMWLGSLFDKIYVRQSSCFSCPPGVLR*RAGSDRAGGPLHNHRDERAILAIAFQIFWGLEYLHSMGIVHRDVKPSNILANTCGSVKLADFGTALPLAEKT---NDVMGTFRYMPPE 555 +G SS V AGT A KV N ++ E+ L + C +IKFYG A+ + + + LE M GSL + ++ G++ E A+ I +QI WGL Y+ VHRDVKPSN+L N+ G VK+ DFG + L +GTF+YM PE Sbjct: 66 RGCSSFVCHAIHAGTNTPLALKVINMFDKGKRDQLIREINALYNARCDSLIKFYG---AFYREGAITIALEYMDGGSLQNVLH---------QVGLM-----------------PEWALANITYQILWGLAYMQHERRVHRDVKPSNLLINSLGQVKVTDFGVSAELQNSMAMCGTFVGTFKYMSPE 223
BLAST of mRNA_E-siliculosus-1a_F_contig1092.637.1 vs. uniprot
Match: A0BSN2_PARTE (Protein kinase domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BSN2_PARTE) HSP 1 Score: 84.7 bits (208), Expect = 1.720e-15 Identity = 62/188 (32.98%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 4 KGGSSLVRWIERAGTPEVHATKVFNTLN-REHGKLFSAELRVLLSVDCPCIIKFYGLNGAWVDQNYVNLVLEAMWLGSLFDKIYVRQSSCFSCPPGVLR*RAGSDRAGGPLHNHRDERAILAIAFQIFWGLEYLH-SMGIVHRDVKPSNILANTCGSVKLADFGTALPLA--EKTNDVMGTFRYMPPE 555 +GG V ++ GT E++A K L+ KL + EL L+S + I++ YG A+ Q Y+ + LE M LGSL D++ + G+++ E ++ I ++I GL+YLH I+HRD+KP NIL N+ G+VK+ADFG ++ + N +GT YM PE Sbjct: 63 QGGFGSVEKVQLKGTQEMYALKKIKFLSDTNQEKLLTRELDALISCESDFIVQCYG---AFYSQGYICIWLEYMDLGSL-DRLLQKD--------GLIK-----------------EPMMMMITYKILQGLDYLHYKHKIIHRDIKPHNILINSEGNVKIADFGICQTVSTGQYLNTYIGTAIYMSPE 221
BLAST of mRNA_E-siliculosus-1a_F_contig1092.637.1 vs. uniprot
Match: A0A448Z319_9STRA (Protein kinase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z319_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 5.640e-15 Identity = 54/162 (33.33%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 82 LNREHGKLFSAELRVLLSVDCPCIIKFYGLNGAWVDQNYVNLVLEAMWLGSLFDKIYVRQSSCFSCPPGVLR*RAGSDRAGGPLHNHRDERAILAIAFQIFWGLEYLHSMGIVHRDVKPSNILANTCGSVKLADFGTALPLAEKT----NDVMGTFRYMPPE 555 ++ + K+ EL+ L + ++ G +GA+++ + V LV+E M GSL +++ S D + ER +++IA+Q+ GLEYLHS I+HRD+KP NIL N+ G VKL DFG + E V+GT R+M PE Sbjct: 146 ISEQRKKMLLKELKALSQLQSKALV---GFHGAFLEDDAVVLVMEYMDGGSLEQWRQKKKTDNIS------------DLLSTKSSRLKRERFVVSIAYQVLKGLEYLHSQRIIHRDIKPGNILLNSRGEVKLCDFGISSLYGEDDASLQTTVVGTSRFMSPE 292 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1092.637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1092.637.1 >prot_E-siliculosus-1a_F_contig1092.637.1 ID=prot_E-siliculosus-1a_F_contig1092.637.1|Name=mRNA_E-siliculosus-1a_F_contig1092.637.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=100bp MKGGSSLVRWIERAGTPEVHATKVFNTLNREHGKLFSAELRVLLSVDCPCback to top mRNA from alignment at E-siliculosus-1a_F_contig1092:7125..10641+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1092.637.1 ID=mRNA_E-siliculosus-1a_F_contig1092.637.1|Name=mRNA_E-siliculosus-1a_F_contig1092.637.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3517bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1092:7125..10641+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1092:7125..10641+ >mRNA_E-siliculosus-1a_F_contig1092.637.1 ID=mRNA_E-siliculosus-1a_F_contig1092.637.1|Name=mRNA_E-siliculosus-1a_F_contig1092.637.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=600bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1092:7125..10641+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |