mRNA_E-siliculosus-1a_F_contig10912.634.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10912.634.1 vs. uniprot
Match: A0A6H5JBC7_9PHAE (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC7_9PHAE) HSP 1 Score: 276 bits (705), Expect = 1.270e-85 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1 Query: 1 ITSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKASTKIPVMGHSEGICHVYIDKAADPTKAVEIAVDAK 420 ITSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKASTKIPVMGHSEGICHVYIDKAADPTKAVEIAVDAK Sbjct: 511 ITSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKASTKIPVMGHSEGICHVYIDKAADPTKAVEIAVDAK 650
BLAST of mRNA_E-siliculosus-1a_F_contig10912.634.1 vs. uniprot
Match: A0A835ZBW4_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW4_9STRA) HSP 1 Score: 216 bits (551), Expect = 1.010e-63 Identity = 107/140 (76.43%), Postives = 122/140 (87.14%), Query Frame = 1 Query: 1 ITSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKASTKIPVMGHSEGICHVYIDKAADPTKAVEIAVDAK 420 +T+PIGVLL+VFESRPDSLPQIASLA+RSGNGLLLKGGKEAEHSNACLH II DAV E + GRV R+ IGLV R AV ELLKLD LIDLVIPRGSG LVN IK++TKIPV+GH+EG+CH++ID AAD KA+ +AVDAK Sbjct: 447 VTTPIGVLLVVFESRPDSLPQIASLALRSGNGLLLKGGKEAEHSNACLHGIIADAVFESTGGRVCREVIGLVVGRQAVAELLKLDALIDLVIPRGSGELVNRIKSTTKIPVLGHAEGVCHMFIDTAADEAKAIALAVDAK 586
BLAST of mRNA_E-siliculosus-1a_F_contig10912.634.1 vs. uniprot
Match: D7G5M6_ECTSI (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M6_ECTSI) HSP 1 Score: 205 bits (521), Expect = 2.570e-60 Identity = 104/106 (98.11%), Postives = 105/106 (99.06%), Query Frame = 1 Query: 1 ITSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKAS 318 ITSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIK + Sbjct: 332 ITSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKVN 437
BLAST of mRNA_E-siliculosus-1a_F_contig10912.634.1 vs. uniprot
Match: A0A7S3CB07_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CB07_9CHLO) HSP 1 Score: 196 bits (498), Expect = 5.750e-60 Identity = 93/140 (66.43%), Postives = 116/140 (82.86%), Query Frame = 1 Query: 1 ITSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKASTKIPVMGHSEGICHVYIDKAADPTKAVEIAVDAK 420 +++P+GVLLI+FE+RPD+LPQIASL+IRSGNGLLLKGGKEA HSN C+H +IVDA+ + +PRD IGLVTSR + +LLKLD LIDLVIPRGS LV HI+ +TKIPV+GH++GICHVY+D+ ADP K I VD+K Sbjct: 129 VSAPLGVLLIIFEARPDALPQIASLSIRSGNGLLLKGGKEASHSNRCIHGVIVDAI---ERAGLPRDLIGLVTSRDEIADLLKLDKLIDLVIPRGSNQLVTHIQQNTKIPVLGHADGICHVYVDEKADPAKVSSICVDSK 265
BLAST of mRNA_E-siliculosus-1a_F_contig10912.634.1 vs. uniprot
Match: A0A0N7L745_PLAHL (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L745_PLAHL) HSP 1 Score: 205 bits (521), Expect = 1.590e-59 Identity = 97/139 (69.78%), Postives = 123/139 (88.49%), Query Frame = 1 Query: 4 TSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKASTKIPVMGHSEGICHVYIDKAADPTKAVEIAVDAK 420 T+PIGVLL++FESRPDSLPQIA+LA+RSGNGLLLKGGKEA HSNA LHRIIV+AV E S+G+V +D IGLVTSR + +LL +D++IDL IPRGSGS+V+HIK +T+IPV+GH+EG+CH+YI AAD K++E+A+DAK Sbjct: 410 TAPIGVLLVIFESRPDSLPQIAALALRSGNGLLLKGGKEARHSNAELHRIIVNAVEEASQGKVKKDVIGLVTSRDEISDLLCMDNVIDLCIPRGSGSMVSHIKKNTRIPVLGHAEGVCHMYIHSAADINKSIELAIDAK 548
BLAST of mRNA_E-siliculosus-1a_F_contig10912.634.1 vs. uniprot
Match: A0A6G0WZZ7_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZZ7_9STRA) HSP 1 Score: 204 bits (519), Expect = 2.180e-59 Identity = 98/140 (70.00%), Postives = 116/140 (82.86%), Query Frame = 1 Query: 1 ITSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKASTKIPVMGHSEGICHVYIDKAADPTKAVEIAVDAK 420 +T+PIGV+L+VFESRPDSLPQIA+LA+RSGNGL+LKGGKEA HSNACLH ++ A+ E +KGRVP IGLVTSR VG LL LDH+IDL IPRGS SLV HIK +TKIPV+GH+EG+CH+YI AD KA +AVDAK Sbjct: 399 VTTPIGVILVVFESRPDSLPQIAALALRSGNGLILKGGKEARHSNACLHSLVQAAIREETKGRVPESVIGLVTSRDDVGALLALDHVIDLCIPRGSNSLVTHIKKNTKIPVLGHAEGVCHMYIHAKADIAKAARLAVDAK 538
BLAST of mRNA_E-siliculosus-1a_F_contig10912.634.1 vs. uniprot
Match: A0A7S2BH10_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BH10_9STRA) HSP 1 Score: 203 bits (516), Expect = 8.250e-59 Identity = 100/140 (71.43%), Postives = 118/140 (84.29%), Query Frame = 1 Query: 1 ITSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKASTKIPVMGHSEGICHVYIDKAADPTKAVEIAVDAK 420 ++ PIGVLLIVFESRPDSLPQIASLA+ SGNGLLLKGGKEAEHSN LH+++VDAVA S G+VPR+ +GLVTSR V +LLKLD LIDLVIPRGS +LV +IK +T+IPV+GH++GICH YID+ AD KA IAVD K Sbjct: 426 LSVPIGVLLIVFESRPDSLPQIASLALLSGNGLLLKGGKEAEHSNYTLHKVVVDAVAAASDGKVPREIVGLVTSRTQVSDLLKLDRLIDLVIPRGSKALVTNIKKNTRIPVLGHADGICHTYIDQHADDVKAAAIAVDGK 565
BLAST of mRNA_E-siliculosus-1a_F_contig10912.634.1 vs. uniprot
Match: A0A1W0A8G2_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8G2_9STRA) HSP 1 Score: 201 bits (512), Expect = 2.300e-58 Identity = 98/140 (70.00%), Postives = 117/140 (83.57%), Query Frame = 1 Query: 1 ITSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKASTKIPVMGHSEGICHVYIDKAADPTKAVEIAVDAK 420 +T PIGVLLIVFESRPDSLPQIA+LA+RSGNGLLLKGGKEA HSNACLH++I DA+ ++GRVPR IGLVT+R V ELLKLDH+IDL IPRGS SLV +IK +T+IPV+GH+EG+CH+YI A+ KA + VDAK Sbjct: 402 LTCPIGVLLIVFESRPDSLPQIAALALRSGNGLLLKGGKEASHSNACLHKLIGDAIESETQGRVPRGVIGLVTTRDDVSELLKLDHVIDLCIPRGSNSLVTYIKKNTRIPVLGHAEGVCHMYIHSGANMEKAKSLVVDAK 541
BLAST of mRNA_E-siliculosus-1a_F_contig10912.634.1 vs. uniprot
Match: A0A662XGH7_9STRA (Glutamate-5-semialdehyde dehydrogenase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XGH7_9STRA) HSP 1 Score: 197 bits (502), Expect = 4.140e-58 Identity = 95/139 (68.35%), Postives = 119/139 (85.61%), Query Frame = 1 Query: 4 TSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKASTKIPVMGHSEGICHVYIDKAADPTKAVEIAVDAK 420 T+ IGVLL++FESRPDSLPQIA+LA+RSGNGLLLKGGKEA HSNA LHRIIV+AV E + G+V +D IGLVTSR + +LL+LD +IDL IPRGSGS+V+ IK +T+IPV+GH+EG+CH+YI AD KA+E+A+DAK Sbjct: 207 TASIGVLLVIFESRPDSLPQIAALALRSGNGLLLKGGKEALHSNAVLHRIIVNAVEEVTNGKVKKDVIGLVTSREEISDLLRLDEVIDLCIPRGSGSMVSFIKKNTRIPVLGHAEGVCHMYIHSQADVKKAIELAIDAK 345
BLAST of mRNA_E-siliculosus-1a_F_contig10912.634.1 vs. uniprot
Match: W7U194_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U194_9STRA) HSP 1 Score: 200 bits (509), Expect = 9.950e-58 Identity = 98/139 (70.50%), Postives = 116/139 (83.45%), Query Frame = 1 Query: 4 TSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKASTKIPVMGHSEGICHVYIDKAADPTKAVEIAVDAK 420 T PIGVLLIVFESRPDSLPQIA+LA+RSGNGLLLKGGKEA HSN LHR+I DA+ S+GRVP + IGLVT+R+ V LL+LD +IDLVIPRGS +LV IK+ST+IPV+GH+EG+CH+Y+DK AD KA I VDAK Sbjct: 440 TVPIGVLLIVFESRPDSLPQIAALALRSGNGLLLKGGKEALHSNQVLHRVITDAMTTASEGRVPAEAIGLVTTRSEVSALLELDDVIDLVIPRGSSALVRSIKSSTRIPVLGHAEGVCHIYVDKGADLRKAARIVVDAK 578 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10912.634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10912.634.1 >prot_E-siliculosus-1a_F_contig10912.634.1 ID=prot_E-siliculosus-1a_F_contig10912.634.1|Name=mRNA_E-siliculosus-1a_F_contig10912.634.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=140bp ITSPIGVLLIVFESRPDSLPQIASLAIRSGNGLLLKGGKEAEHSNACLHRback to top mRNA from alignment at E-siliculosus-1a_F_contig10912:376..1784- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10912.634.1 ID=mRNA_E-siliculosus-1a_F_contig10912.634.1|Name=mRNA_E-siliculosus-1a_F_contig10912.634.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1409bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10912:376..1784- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10912:376..1784- >mRNA_E-siliculosus-1a_F_contig10912.634.1 ID=mRNA_E-siliculosus-1a_F_contig10912.634.1|Name=mRNA_E-siliculosus-1a_F_contig10912.634.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=840bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10912:376..1784- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |