mRNA_E-siliculosus-1a_F_contig1090.625.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1090.625.1 vs. uniprot
Match: D7FRM8_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM8_ECTSI) HSP 1 Score: 908 bits (2347), Expect = 0.000e+0 Identity = 461/488 (94.47%), Postives = 465/488 (95.29%), Query Frame = 3 Query: 126 MASAXXXXXXXAETTSRREYIMSELQQVRELFPAPMIQAANTSFVQVVVMRTPYAKIQARLQFPEDYPARSTSPIVELTSASLPQPFLRKLIKSAEEAARACTPTAAKREAVGGVETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTSLGGGFLADEASGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVEFKSHNFPAHIARRHLVQGEEIVRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKSKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPRHPSLRDPAHKERPTRRASRAAGTLVFCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDFFTVDARFQTGAGRGDDFDAFS 1589 MASA AETTSRREYIMSELQQVRELFPAPMIQAANTSFVQVVVMRTPYAKIQARLQFP+DYPARSTSPI+ELTSASLPQPFLRKLIKSAEEAARACTPTAAK EAVGG ETGKAVAALKVV+DAVNKNKFLPCWKELRQAATLVTSLGGGF ADE SGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVE KSHNFPAHIARRHLVQGEEIVRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGK+KPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPRHPSLRDPAHKERPTR VFCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDFFTVDARFQTG GRGDDF AFS Sbjct: 1 MASASAAAGAGAETTSRREYIMSELQQVRELFPAPMIQAANTSFVQVVVMRTPYAKIQARLQFPDDYPARSTSPILELTSASLPQPFLRKLIKSAEEAARACTPTAAKSEAVGGGETGKAVAALKVVVDAVNKNKFLPCWKELRQAATLVTSLGGGFRADEESGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVELKSHNFPAHIARRHLVQGEEIVRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKNKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPRHPSLRDPAHKERPTR---------VFCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDFFTVDARFQTGVGRGDDFGAFS 479
BLAST of mRNA_E-siliculosus-1a_F_contig1090.625.1 vs. uniprot
Match: A0A7S1UKC2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKC2_9STRA) HSP 1 Score: 318 bits (816), Expect = 7.360e-99 Identity = 187/455 (41.10%), Postives = 253/455 (55.60%), Query Frame = 3 Query: 195 ELQQVRELFPAPMIQAANTSFVQVVVMRTPYAKIQARLQFPEDYPARSTSPIVELTSASLPQPFLRKLIKSAEEAARACTPTAAKREAVGGVETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTSLGGGFLADEASGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVEFKSHNFPAHIARRHLVQGEEIVRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKSKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQE---ELLHSQLSDTSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPRHPSLRDPAHKERPTRRASRAAGTLVFCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDFFTVDARFQ 1550 EL VRE PA I+A ++ V + RT + +I+A+L PEDYP T + L S +LP P LRKL E A E + + L+ + + + N+F CW+E+R+AA LVT GG DEA+G+VT+RV+ Y + I++P+ YP G G E H FP + + Q E+ VR+C+ G E AL+ SNPI+ P +GG G+ VR+T+EH+R+LKHDV F+KK DLR V + N + S Q+RR+ARR L L K E ++E KK+ ELE +E+ L SD +QPSL +V LV +P E C AC + PE P SL D RP R VFCGH+ H+DCL W+TEPPF + C C R+YHPDWP + K LE+AWAN+QA+ RE+ +V DF VD RFQ Sbjct: 12 ELAAVREWLPAEQIEALRPDYISVHLQRTRHNRIKAKLTPPEDYP--ETHLTLTLESPALPPPLLRKLTHQCEAVVAAAG------------EGPQVMPVLRHLHNFLCGNRFTTCWREVRRAAQLVTDHGGRVGLDEANGIVTMRVEQRGYGLTLRIEIPEAYPDVGAGFEVVRHTFPEAMMAAYSAQAEDAVRKCVGGQPWEDALRASNPIRGPGRKGGGSDGTPTVRVTNEHMRSLKHDVRFLKKVTDLRQVNARRENRNGTLVA-SAQDRRSARRTLSRLQKKEGAADEAYEKKMQELEAREEAIAAGLSADNHSDDAQPSLSAVVGLLVRKLVLEIPGEECQACGELAFPESPAAASLSDDTAPMRPCR---------VFCGHYLHWDCLNRWLTEPPFVRSCTHCNRRIYHPDWPSDYKLLERAWANQQAREREINDVSDFLGVDERFQ 442
BLAST of mRNA_E-siliculosus-1a_F_contig1090.625.1 vs. uniprot
Match: A0A7S3M8B6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8B6_9STRA) HSP 1 Score: 273 bits (699), Expect = 4.140e-81 Identity = 169/465 (36.34%), Postives = 249/465 (53.55%), Query Frame = 3 Query: 159 AETTSRREYIMSE-LQQVRELFPAPMIQAANTSFVQVVVMRTPYAKIQARLQFPEDYPARSTSPIVELTSASLPQPFLRKLIKSAEEAARACTPTAAKREAVGGVETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTSLGGGFLADEASGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVEFKSHNFPAHIARRHLVQGEEIVRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKSKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPRHPSLRDPAHKERPTRRASRAAGTL-VFCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDFFTVDARF 1547 AE+ + R M E L +RE + + +V +V++RT Y+++Q + + E YP P +EL+S +LP P L+ K E AR + + A + + ++ N F+PCWKE++Q +TL + G ADE G+V +++ +Y ++VP YP +G VEF + NFP I Q +EIVRRC G + E A+Q SNPIK + + R+T+ ++ +LKHDV +K+ DLR SK AK ERR ARR+L+ LA+ E+ +++E K + E E E ++L+ + S+T+QPSL FLV F RLP E C AC K V+PE P D A TR A + FCGHW H+ CL W+T PPF + CP C R++HPDWP++ KQLEKAW +A++RE+ +V DF + +F Sbjct: 31 AESINPRASAMKEDLAFIRECITPAAVITVSKEYVTLVIIRTQYSRVQFHVGYTEAYPFEL--PTLELSSPTLPIPLLQNKQKECLENARPLLGQSMMK------------ALYEPIHKFIHTNMFIPCWKEMKQISTLCENKGK-IGADEKEGVVLLKLNCCKYKHTVKLKVPYNYPEDGVKVEFSNSNFPEDIQYMFQSQVDEIVRRCAAGATVEQAMQVSNPIKF--AEIASKSVTPTPRLTTNNLLSLKHDVGVLKQISDLRVATTSGSK--AKYVTQVNAERREARRDLRKLAREESAADQEAQKAILEEEQNEMKDLIKGKASETAQPSLYAAAHFLVEDFACRLPLELCQACKKPVLPELPESEKPPDSAPSTSKTRAARANLKPMRTFCGHWLHFQCLNEWLTTPPFVRMCPVCARRIWHPDWPEDHKQLEKAWQANEARKREMCDVSDFMGMGEKF 476
BLAST of mRNA_E-siliculosus-1a_F_contig1090.625.1 vs. uniprot
Match: A0A7S4VQJ9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VQJ9_9STRA) HSP 1 Score: 242 bits (618), Expect = 2.480e-69 Identity = 162/481 (33.68%), Postives = 254/481 (52.81%), Query Frame = 3 Query: 180 EYIMSELQQVRELFPAPMIQAANTSFVQVVVMRTPYAKIQARLQFPEDYPARSTSPIV---ELTSASLPQPFLRKLIKSAEEAARACTPTAAKREAVGGVETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLV---TSLGGG---------FLADEASGLVTIRVKS-GRYTVVALIQVPDGYPM--------EGCGVEFKSHNFPAHIARRHLVQGEEIVRRCLCGYSPELALQTSNPIKIPPGR-GGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKSKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTS----QPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPR-----HPSLRD-PAHKERPTRRASRAAGTL-VFCGHWFHYDCLRVWMTEPPFAKDCPR--CGHRVYHPDWPQEPKQLEKAWANRQAKRREV 1508 E + E++++++ FP IQ+A SF+ RTP +I+ L FP+ YP + +V ++ A L + R+L K+A + A + V V + ++D VN N+F+PCW+EL+Q LV ++ G G +E G + +R++S G + I + + YP + C ++ +S NFP I Q +E+VRR G +P+ AL+ SNPI+ P G G + VR+T E ++ LK D E +K+ DLR V + NA + + +ER+ ARR +K + +E + ++ + +L+E+ L +SD QPSLL LV FL+ RLP+ETC C K V+P +P+ + + D +E+ R+ +R + FCGHW+HY+CL ++MTEPPF +C CG RVYHPDWP + K+LE+AWANRQA+ RE+ Sbjct: 3 ESVADEIKELQKNFPQVSIQSATDSFLTASYERTPSTRIKITLTFPDGYPTHAAIILVSASDVVPAGLKKKLERELGKTASD-------LAGQYNQVNDV--------FRRLVDFVNTNRFVPCWRELKQCVDLVNNDSTAGNGNKTKKKSSSIAINELEGKIKLRLQSAGEFYYSCSIVIDENYPSTKTHMDYGKPCHLKMESTNFPPKIESMLTTQAQELVRRMQDGMTPDDALKMSNPIRAPKGYLGDESKEPTKVRLTQETLKGLKRDTETLKEVRDLRQVDAESKQGNATIKAHAAKERKNARRAIKKITASEIAKDTSAEEREKQWQLEEKARLAGYNISDFDGSHPQPSLLSLVIFLMEKIQ-RLPEETCPVCTKAVLPTNPKDLKFLYTNASDFKTEREKKARKVARLKRPIRTFCGHWYHYNCLDIFMTEPPFGAECKAEGCGRRVYHPDWPGDMKELERAWANRQARAREI 467
BLAST of mRNA_E-siliculosus-1a_F_contig1090.625.1 vs. uniprot
Match: A0A7S4HL96_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HL96_9STRA) HSP 1 Score: 218 bits (555), Expect = 3.290e-60 Identity = 154/480 (32.08%), Postives = 238/480 (49.58%), Query Frame = 3 Query: 186 IMSELQQVRELFPAPMIQAANTSFVQVVVMRTPYAKIQARLQFPEDYPARSTSPIVELTSASLPQPFLRKLIKSAEEAARACTPTAAKREAVGGVET-----GKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTS----LGGGFLAD---------EASGLVTIRVKSGRYTVVALIQVPDGYPMEGCG--------VEFKSHNFPAHIARRHLVQGEEIVRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKSKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSD----TSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPR------HPSLRDPAHKERPTRRASRAAGTL-VFCGHWFHYDCLRVWMTEPPFAKDCPR--CGHRVYHPDWPQEPKQLEKAWANRQAKRREV 1508 + E++++R P +I +A +F+ RT +++++A L FPE YP IV++ + P L+K ++ RE +GGV + G+ A + ++ V+ NKFLPCW+ELRQ LVT + G + E+ G + + + S RY + + + DGY C E +S NFP I QG+E+VRR G + E AL+ SNP+++P G VR+T E V+ LK D E + DLRDV + + +V S +ER+ ARR + + E + EQ +K + +L+E+ + ++ QPSLL LV FLV RLP E C C + +P DP+ S+ KE+ +R+A++ + +CG W+H+ CL +M EPPF +C CG RVYH +WP + K LE+ WA +QAK RE+ Sbjct: 9 VAEEVKELRRHLPKVVISSATENFITATYERTQFSRVKATLTFPEGYPTHPL--IVDVACDDVVPPGLKKKLE---------------RE-LGGVASSLAGKGQLCAVFEKLVSFVDTNKFLPCWRELRQCVDLVTGGTTRVAAGKTNESCCSTVTIIESKGKIKVSLWSERYFYRSSVVIDDGYRSTSCHEDYGKPCRFEMESTNFPPKIESLLTSQGKELVRRMQDGMAAEDALKMSNPVRLPKTFKGNTHEPVKVRLTQEAVKGLKKDTETLSAVRDLRDVNAATKQGDVRVKLHSKKERKDARRMIHKITDREIAKDSEQEEKERQWQLEEKARIAGYNFTEFDGSNPQPSLLTLVKFLVREVH-RLPNEHCPVCSELTLPTDPKDLKALYQSSVDAKTEKEKRSRKAAKQKRPMRTYCGCWYHHRCLDKYMREPPFGAECRTEGCGRRVYHNEWPGDMKVLEREWAAKQAKAREI 469
BLAST of mRNA_E-siliculosus-1a_F_contig1090.625.1 vs. uniprot
Match: A0A2R5GBD8_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBD8_9STRA) HSP 1 Score: 197 bits (501), Expect = 2.950e-52 Identity = 154/468 (32.91%), Postives = 245/468 (52.35%), Query Frame = 3 Query: 171 SRREYIMSELQQVRELFPAPMIQAANTSFVQVVVMRTPYAKIQARLQFPEDYPARSTSPIVELTSASLPQPFLRKLIKSAEEAARACTPTAAKREAVGGVETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTSLGGGFLA-DEASGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVEFKSHNFPAHIARRHLVQGEEIVRRCLCGYSPELALQTSNPIKI-----PPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKSKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTSQPSLLP------LVDFLVNVFGWRLPQETCVACDKRVMPEDP-RHPSLRDPAHKERPTRRASRAAGTLVFCGHWFHYDCLRVWMTEPPFAKDCPR--C-GHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDF 1526 +R I + + ++++ A ++ F ++V +T Y ++ +QF ++YP+ VE+ S +LP KL++ + R A ++ +G A V + +++NK L E+RQ L + +A ++ +G + ++ G+Y + A++ VPD YP VE K +FP + L+Q EI R+C G S E A+Q S + PP KP +V++TS H++++KHDV F+KKA+DL++V +K + STQ RRAARREL+ L K E E+E+A++ AE + E+E+L + T Q L P +V+FL F +RLP+E + DK V P DP + L + K+RPTR S CG W+ Y L+++M PPF K CPR C G V HP++ +PK+ E A++ QA +RE+ EV DF Sbjct: 54 TREAAIARDREDLKDVIHAHHLKTFTEDFAKLVCHKTAYRRLMLHVQFSDNYPSDPLH--VEVQSDTLPA----KLVEKLQAMFREKLEKPADQDGLGVRGRPHVAAFYAYVDEMIHENKLLWATPEVRQTLALAKEIPDLTIAVNDEAGTLKLKATCGKYMMRAVVTVPDEYPASPLEVEMKKCSFPPTVHTVFLLQAREIARKCSIGVSVERAVQQSTTVVADRLIAPP---QKPGTKRDVKMTSAHLKDIKHDVNFLKKANDLQEVNASYNK-QLHMYLHSTQVRRAARRELRKLTKQEF--EKERAREEAEAAVAEEEQLREWRRV-TGQEDLGPQRCIRAVVEFLTRGFIFRLPKEKSLVSDKAVFPADPAKAQELINRRRKDRPTRVPS--------CGCWWIYSELKIFMETPPFPKPCPRPACNGAIVEHPEFENDPKKRELAYSKSQAVKREMQEVEDF 500
BLAST of mRNA_E-siliculosus-1a_F_contig1090.625.1 vs. uniprot
Match: B8BWC1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWC1_THAPS) HSP 1 Score: 192 bits (487), Expect = 1.750e-50 Identity = 149/474 (31.43%), Postives = 229/474 (48.31%), Query Frame = 3 Query: 186 IMSELQQVRELFPAPMIQAANTSFVQVVVMRTPYAKIQARLQFPEDYPARSTSPIVELTSASLPQPFLRKLIKSAEEAARACTPTAAKREAVGGVETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTSLGGGFLAD---------EASGLVTIRVKSGRYTVVALIQVPDGYPM----EGCGVEFKSHNFPAHIARRHLVQGEEIVRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNV--RITSEHVRNLKHDVEFIKKAHDLRDVGEGKSKPNAKVAPPS----TQERRAARRELKTLAKTEAVS-----EEEQAKKLAELELKEQEELLHSQLSDTSQPSLLPLVDFLVN-VFGWRLPQETCVACDKRVMPEDPRHPSL------RDPAHKERPTRRASRAAGTLVFCGHWFHYDCLRVWMTEPPFAKDCP--RCGHRVYHPDWPQEPKQLEKAWANRQAKRREV 1508 I +E+++ + +FP+ + + F+ RTPY +I+ L FP+ YP+ ++ A +PQ +KL K A E + + + + V+ N F+PCWKEL++ LV S A E G + + + + Y I + YP + C ++ +S NFP I Q +EIVRR G S E AL SNPI++P + ++ RIT+E ++N+KHD E +K+ +LR+ E SK N ++R+ ARR + L + E ++ E+++A KL E +L E ++ S QP L LV FLV+ V G L ETC C +RV+P DP L +++ P + +CG W+H CL ++TEPPF +CP CG RV+HPDWP + KQLE+ WA R+A++REV Sbjct: 15 ISAEVKEAQSMFPSVNVLTSTPHFLIATYERTPYTRIKMTLTFPDGYPSHPLVVNID-QDALVPQGLKKKLEKELNGLAN---------ERAKLTQYDQVRVVWERLTTFVDTNMFVPCWKELKKCVDLVQSSNTKATAKGKQSTMSIIETKGKIQLSLHNEAYYYKCSILIDPAYPDFSSGKSCNLQIQSTNFPPTIETMLTAQAQEIVRRMQEGLSRERALLMSNPIRLPKNFHLHDDDNNSIKSRITNETIKNIKHDTETLKRVCELRNA-ESASKYNHNAGYQDLKVLAKDRKDARRTINKLTEAERMADLKLEEKQRANKLEEAKLIEGYYDVYEG-SHEPQPCLYVLVKFLVDKVRG--LVGETCPCCTERVLPVDPDELKLMYGSNSHQVNNQKHPKATKKKMKPMRCYCGCWYHKSCLNTFLTEPPFGIECPTENCGRRVFHPDWPGDIKQLEREWAAREARKREV 474
BLAST of mRNA_E-siliculosus-1a_F_contig1090.625.1 vs. uniprot
Match: F0YDK0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDK0_AURAN) HSP 1 Score: 196 bits (498), Expect = 4.310e-49 Identity = 143/435 (32.87%), Postives = 203/435 (46.67%), Query Frame = 3 Query: 225 APMIQAANTSFVQVVVMRTPYAKIQARLQFPEDYPARSTSPIVELTSASLPQPFLRKLIKSAEEAARACTPTAAKREAVGGVETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTSLGGGFL-ADEASGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVEFKSHNFPAHIARRHLVQGEEIVRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSG-NVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKSKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTSQ--------PSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPRHPSLRDPAHKERPTRRASRAAGTLVFCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKR 1499 A ++++A + V+ TP+ I+ L + YPA T+ +VE+ + + P A G AA + ++ N+F+PCW+ELR+ A L GGG A+ A G+ K+G Y V + VP YP G + ++ +F + L Q E+VRRC G + A + S+P+ R G G V + H R+LK D++ +KK DLRDVG ++K V +ERR A+RELKTLA+ E ++ H+ LS T+ PSL V+ LV+ F RLP+ETC C RV+PEDP P+ A + PTR CGHWFHY CL +T PPFA C C RV+HP WP K L++AW R+ R Sbjct: 681 ADVLESATPALTSFRVVVTPHRCIKVILHYQAGYPA--TAAVVEVRNPAYPPXXXXXXXXX-------XXXXXXXXXAEGRGALAPVAAAARAFLEG---NRFVPCWRELRRCALLCERRGGGMAGANPAKGVARFAAKTGAYAVEFSVTVPADYPAAGVELAVRASDFSRPLVDVQLAQVRELVRRCAAGADVDAAKRLSDPVAASAARLGAGDDRGPRVTASGAHFRSLKWDMKALKKIADLRDVGAERTKRG--VPAHGREERRGAKRELKTLARFEGA----------------RDAAAHAALSATAAEAAAAPPVPSLFAAVEALVDDFAARLPEETCQCCGARVLPEDPACPA----AAGDEPTR---------ALCGHWFHYACLEKALTGPPFALSCGACDRRVWHPAWPDAAK-LKEAWHARERPR 1071
BLAST of mRNA_E-siliculosus-1a_F_contig1090.625.1 vs. uniprot
Match: K0SBM5_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBM5_THAOC) HSP 1 Score: 180 bits (457), Expect = 2.360e-46 Identity = 148/482 (30.71%), Postives = 224/482 (46.47%), Query Frame = 3 Query: 186 IMSELQQVRELFPAPMIQAANTSFVQVVVMRTPYAKIQARLQFPEDYPARSTSPIVELTSASLPQPFLRKLIKSAEEAARACTPTAAKREAVGGVETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTSLGGGFLADEAS--------GLVTIRVKSGRYTVVALIQVPDGYPM-------EGCGVEFKSHNFPAHIARRHLVQGEEIVRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNV----RITSEH-VRNLKHDVEFIKKAHDLRDVGEGKSKPNAKVAPPSTQE----RRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEEL-----LHSQLSDT--SQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPRHPSLRDPAHKERPTR--RASRAAGTLVFCGHWFHYDCLRVWMTEPPFAKDCPR--CGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDF 1526 + E+ + FP ++ A SF+Q R+PY +++ L FP+ YP + + +P RKL + AA + G + L +N+N F+PCW+EL+Q +LV + + + S G + + + + +Y I V YP + C ++ + NF I Q +EIVRR G S E A+ SNPIK+P K G V R+TS + ++KHD E +K+ +DLR + + +T++ R+ ARR ++ L + E +E+ K + +L+E++ L H T QPSLL LV FLV L E C AC +RV+PE+P +L HK R R V+CGHW+H DCL MTEPPF CP CG R+YHPD+ + + LE+ WA +QA+ REV + +F Sbjct: 6 VAEEIADAKRTFPGVLVATATDSFMQCSYERSPYTRVRLTLSFPDGYPDGHQLIVSVVADDIVPVGLKRKLEGDLNQ-------VAADNKNKGYTQIEHIFRHLTTF---INENMFVPCWRELKQCVSLVKTSNENESSTKQSTISIYERQGKIRLGIVASKYHYNCSITVDPAYPDFSPANSGKACLLKVTATNFSEPIVLVLTSQAQEIVRRMQEGLSREKAVLLSNPIKVP-----KHFHLGAVLDKERVTSNSTILDIKHDTEALKRVNDLRKKEATSVRASGDNGYVNTKQLARDRKNARRAIQKLTEEERKHDEDLNSKERQWQLEEKKRLEGYYDSHIGQGGTIDPQPSLLVLVSFLVQKIKG-LVDERCPACKERVLPENPDDLALMYGKHKSARERSKECKRRRPMRVYCGHWYHRDCLTTTMTEPPFGLSCPAPGCGKRIYHPDFSGDIQTLEREWAAKQARLREVEDAMNF 471
BLAST of mRNA_E-siliculosus-1a_F_contig1090.625.1 vs. uniprot
Match: A0A7S2K5N5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K5N5_9STRA) HSP 1 Score: 179 bits (454), Expect = 5.820e-46 Identity = 142/483 (29.40%), Postives = 219/483 (45.34%), Query Frame = 3 Query: 195 ELQQVRELFPAPM-IQAANTSFVQVVVMRTPYAK---IQARLQFPEDYPARSTSPIVELTSASLPQPFLRKLIKSAEEAARACTPTAAKREAVGGVETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTSLG---------------GGFLADEASGLVTIRVKSGRYTVVALIQVPDGYPM--------EGCGVEFKSHNFPAHIARRHLVQGEEIVRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKSKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLS----DTSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDP-------RHPSLRDPAHKERPTRRASRAAGTL-VFCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDF 1526 E +Q+ P + I A SF+ R + IQA + P++YP + PI+ + L L+K ++SA T + G + G+ +AA + ++ ++ NKFLPCW+EL+ +V +L +E +G + +++ RY IQ+ D YP + C ++ N P I Q +++VR+ G S + A SNPI+ P A VR+T E +++LK D E +K +LR V NAKV +ER+ ARR +K + +E + +K + ++ E+ L +S QPSL LV FL++ WRLP+E C C V+P +P + S KE + CG W+HY CL +M EPPF C C RVYHPDW + LE+ WAN+QA+ RE+ +V+ F Sbjct: 2 EYKQLSNTAPPKLRIVAKTPSFITASYARANNVRKTLIQATITVPDEYP--QSPPIINV---DLKLKGLKKKLESAM--------TQESMQLKG--QYGQIIAAFRCLVHFIDTNKFLPCWRELKDCTDMVQNLNEKNQHSSNNXXXXXKSTVSCNELTGKIRLKLCHNRYYYSCSIQIHDAYPSTTTIAEWGKACVLKMVGTNLPPKIENMMSTQAQDLVRKMQDGMSYDDAFNASNPIREPKDFRKHAAKEVTVRLTQEKLKSLKQDTETLKVVGNLRHVDGDSVSWNAKVKAHGAKERKDARRNIKKITDSEIAKDLAAEEKDKQWQIDEKSRLAGYDISAFDGSNPQPSLKALVRFLIDRI-WRLPEEKCPVCTTLVLPANPDELLTLYKSSSSDCKTEKEXXXXXXXXXXXPIRPICGCWYHYSCLDKFMREPPFGASCLSCKARVYHPDWSDNMQTLEREWANKQARLREIEDVKMF 468 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1090.625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1090.625.1 >prot_E-siliculosus-1a_F_contig1090.625.1 ID=prot_E-siliculosus-1a_F_contig1090.625.1|Name=mRNA_E-siliculosus-1a_F_contig1090.625.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=501bp MAYFDSDNAAAQMASASAAAGAGAETTSRREYIMSELQQVRELFPAPMIQback to top mRNA from alignment at E-siliculosus-1a_F_contig1090:21155..25765+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1090.625.1 ID=mRNA_E-siliculosus-1a_F_contig1090.625.1|Name=mRNA_E-siliculosus-1a_F_contig1090.625.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4611bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1090:21155..25765+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1090:21155..25765+ >mRNA_E-siliculosus-1a_F_contig1090.625.1 ID=mRNA_E-siliculosus-1a_F_contig1090.625.1|Name=mRNA_E-siliculosus-1a_F_contig1090.625.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3006bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1090:21155..25765+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |