mRNA_E-siliculosus-1a_F_contig109.621.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig109.621.1 vs. uniprot
Match: D7FKV7_ECTSI (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV7_ECTSI) HSP 1 Score: 1377 bits (3565), Expect = 0.000e+0 Identity = 695/707 (98.30%), Postives = 696/707 (98.44%), Query Frame = 3 Query: 51 MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 2171 MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFS+MGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXX KIQMKLEFRQQ VAEM LRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ Sbjct: 1 MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSKMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXKIQMKLEFRQQ------VAEMNLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 701
BLAST of mRNA_E-siliculosus-1a_F_contig109.621.1 vs. uniprot
Match: A0A835YNH6_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH6_9STRA) HSP 1 Score: 838 bits (2165), Expect = 2.370e-291 Identity = 405/691 (58.61%), Postives = 515/691 (74.53%), Query Frame = 3 Query: 99 DELKDYMSPDEGDGD-LAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDN--VLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLG-DVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVK 2159 D L D+MS ++ D D L F+RP+L +D STAVVV N+P+V K KL GVV K+F++ GTI ++G+ P D G + GF F+NF ++A+ A A +N +QLDK H V+P+E+L +L S+P+EY P P ++PR D SWLADE HRDQFV+RYS P G HE V W E+ P+ CYGGEREK GKAW EL++ WSPQGTYL + H+PGIALWGGE+FEKQGRF H +VKV+EFSPCE Y++TCNF+ ++A+IVWEV +G +LR FP G SLF+WS DG+++ARKG+D +SIY LPSM LLDKKSLKA G++DFEWSP + LAYWAPEQ N PARVSVVEIPSRK+LRQKNL VSECRLHWQ+EG YLCVKVLRHSK+KKTMYNNFE+FRV +P VPVE +E + V AFAWEP GDRFA+V G ++P++ +TFYTMKGGA NEL E+ TL+D+P NH+YWSP G ++AAMG++ G NG L FYDVE+++ L+++EHFR +Y+EWDPSGRY CTAV+QP+ GSHWKAQMDNGY+L+SFQGE+F+E KDNFYQ+ WRPRP SLL+S EKKKVV+NL+KYE+ AM+ K++ K FR + VA + RL R ELV+LR+GYDS DE+++ V++RT EV++SVK Sbjct: 29 DPLADWMSEEDPDDDGLGDFQRPQLRMDFSTAVVVDNIPRVPAEKLVKLRGVVTKLFNQCGTIQENGICIPTD-AAGESLGFMFINFTTAEEARSAVAVINNYQLDKRHQFHVFPYERLDQLASVPDEYAPPPPMEYRPRPDLGSWLADENHRDQFVIRYSMPGVGGTPAHETIVNWCERFAPPTQCYGGEREKAQGKAWVELYVTWSPQGTYLASLHIPGIALWGGEQFEKQGRFAHSNVKVIEFSPCENYLLTCNFDTTERAMIVWEVRSGAVLRTFPARAFEG--GPPSLFKWSPDGRFIARKGRDCVSIYALPSMALLDKKSLKATGIADFEWSPSTSSCALAYWAPEQDNTPARVSVVEIPSRKDLRQKNLFNVSECRLHWQNEGTYLCVKVLRHSKTKKTMYNNFELFRVADPQVPVEMLELRSNVIAFAWEPTGDRFAIVHGTELPRVNITFYTMKGGASGNELAEVVTLEDKPVNHLYWSPQGQFIVMAAMGENTGGTNGYLNFYDVESKTILRESEHFRLSYLEWDPSGRYICTAVNQPIDGSHWKAQMDNGYRLWSFQGEQFYELTKDNFYQVLWRPRPVSLLSSEEKKKVVRNLKKYERRFERADKIASRRKARAAMAGKVRQKQAFR------AHVAARRERLLARHHELVELRDGYDSHDEANFFVETRTREVIMSVK 710
BLAST of mRNA_E-siliculosus-1a_F_contig109.621.1 vs. uniprot
Match: A0A6H5KAX0_9PHAE (eIF2A domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAX0_9PHAE) HSP 1 Score: 656 bits (1693), Expect = 1.440e-225 Identity = 342/405 (84.44%), Postives = 348/405 (85.93%), Query Frame = 3 Query: 957 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 2171 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQ LETLQDRPFNHIYWSP+GNIC+LAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTG HWKAQMDNGYQLFSFQGERFHEFKKD+FYQIQWRPRPASLLTSAEKKKVVKNLRKY+K XXXXXX AM+DKIQMKLEFRQQASGLSRVA+MKLRLE RRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ Sbjct: 14 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW--------------------------------------------QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQVLETLQDRPFNHIYWSPVGNICILAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGGHWKAQMDNGYQLFSFQGERFHEFKKDHFYQIQWRPRPASLLTSAEKKKVVKNLRKYDKRFEKDDRXXXXXXAREAMADKIQMKLEFRQQASGLSRVADMKLRLEARRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 374
BLAST of mRNA_E-siliculosus-1a_F_contig109.621.1 vs. uniprot
Match: A0A8K1FRG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRG0_PYTOL) HSP 1 Score: 626 bits (1615), Expect = 6.650e-209 Identity = 329/671 (49.03%), Postives = 434/671 (64.68%), Query Frame = 3 Query: 177 DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDV-PKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 2171 D S VVV LP V AKH KL VV+K+FS++GT+ D + PF G T GFAFV F A A T+N + LDK H + V + L + + PEE+ +P+ + F + +WL D RD FVLR+S E E+ WS+K + +L Y G REK GK WC +++WSPQGTYL TFH GIALWGG+ +EK GRF HK+VK+ FSP E Y++T + + AII+W+V T +MLRAFP T A G + F+WSAD +++AR+GKD+IS+YELPSM+LLDKKSLKA+GV DF WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+L W G +L VKV RHSKSKKT++ NFEIFRV E LVPVE+ E K + AF++EP G RFA+V G+ +L V+FY M GGA KNEL L TL D+P +H+YWSP GN +LA +G+ NG LEF+D + + ++ EHF+C ++EWDPSGR +AV QP+ S++K QMDNG+ L++FQG++ E KKD FYQ WRPRP +LL+ E K VVKNL+KYEK ++K + EF + + A RRQE + L NGYDS+D+ Y+V++R+ + VLS KE +Q Sbjct: 46 DYSMCVVVGGLPVVDNAKHGKLLNVVKKIFSQVGTVVD--IDMPF-AANGNTNGFAFVEFEQDTHANDAVRTINNFALDKRHTLLVNKYTDLEKYQKTPEEFVAPKIEKFVEPKNLKTWLMDSARRDMFVLRHST---------ETEIFWSDKGEV-TLDYDGAREKTNGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDNYEKVGRFAHKNVKIAVFSPQENYLVTLSETDTENAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLQWHPNGTFLNVKVTRHSKSKKTLFTNFEIFRVHESLVPVESFEMKDTIVAFSFEPKGSRFAIVHGEGNQRLNVSFYDMNGGAKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGLGEI----NGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVSSAVCQPIDNSYYKFQMDNGFTLWTFQGKKLLEEKKDAFYQFLWRPRPRTLLSDKEYKDVVKNLKKYEKRFNEMDRMKERERIAAEKAEKQRQHQEFVDLVAARAETAR------ARRQEYIALLNGYDSEDDDEYIVETRSYDDVLSEKEEVQ 693
BLAST of mRNA_E-siliculosus-1a_F_contig109.621.1 vs. uniprot
Match: M4BHP4_HYAAE (Eukaryotic translation initiation factor 3 subunit B n=15 Tax=Peronosporaceae TaxID=4777 RepID=M4BHP4_HYAAE) HSP 1 Score: 622 bits (1605), Expect = 5.480e-207 Identity = 328/695 (47.19%), Postives = 445/695 (64.03%), Query Frame = 3 Query: 111 DYMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPK-LEVTFYTMKGGAG-KNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2168 DY+S +E + ++ E + D S AVVV LP V ++KH KL VV+K+F ++G++ D + PF G T GFAFV + A A T+N + LDK H + V +E + R P+E+ +P+ F + SWL D RD FVLR+ E E+ WS+K + L Y G+REK GK WC +++WSPQGTYL TFH GIALWGG+++EK GRF HK VK+ FSP E Y++T + + + AII+W+V T ++LRAFP T A G + F+WSAD KY+AR+G D+IS+YELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE N PARVS+VE+PSR E+RQKNL VS+C+LHW +G +LCVKV RHSKSKKTMY NFE+FRV+E LVPVE +E K + AFAWEP G RFA V G+ + L V+FY M GG+ E+ L TL+D+ +H+YWSP+GN +LA +G+ NG+LEF+D Q ++ EHF+C+++EWDPSGR TAV QP+ S++K MDNGY L++FQG++ E KKD F+Q WRPRP +LL+ A+ K VVKNL+K+EK +++ + + EF++ + + + GRR E + L GYDSDDE+ Y+V T + VL VKE + Sbjct: 22 DYLSDEEVEDEVMTKAHEEADFCNDFSMAVVVGGLPVVDDSKHGKLLNVVKKIFGQVGSVVD--IDMPFGDD-GNTTGFAFVEYEQEAHANDAVRTINSFALDKRHTMNVNKYEDVERYLKTPDEFVAPKVDKFVEPKNLKSWLTDPSRRDMFVLRHGT---------ETEIFWSDKGEV-ELDYAGDREKTNGKQWCMQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKKVKLAMFSPNENYLITVSETEQESAIIIWDVKTSKLLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGTDVISVYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRHEVRQKNLFNVSDCKLHWHPDGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKDNIVAFAWEPKGTRFAAVHGEGQQHLNVSFYDMDGGSNVAKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDTTEQQSITVQEHFKCSHVEWDPSGRVVATAVCQPLDNSYYKLTMDNGYNLWTFQGKKLLEEKKDTFFQFLWRPRPRTLLSDAQYKNVVKNLKKFEKRFDQMDRFKERERLAAENAERNKKEQEFQEL------LQKRLITAAGRRAEYLSLLGGYDSDDENEYIVQKHTYDDVLEVKEEV 693
BLAST of mRNA_E-siliculosus-1a_F_contig109.621.1 vs. uniprot
Match: G5A2B4_PHYSP (Eukaryotic translation initiation factor 3 subunit B n=7 Tax=Phytophthora TaxID=4783 RepID=G5A2B4_PHYSP) HSP 1 Score: 620 bits (1598), Expect = 2.410e-206 Identity = 332/695 (47.77%), Postives = 441/695 (63.45%), Query Frame = 3 Query: 111 DYMSPDEGDGDLAGFERPELNV--DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGAGK-NELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2168 DY+S +E + ++ E + D S +VVV LP V E KH KL VV+K+F ++G + D + PF G T GFAFV + A A T+N + LDK H + V +E + R + P E+ +P+ F + +WLAD RD FVLR+ E E+ WS+K + L Y G+REK K WC +++WSPQGTYL TFH GIALWGG+++EK GRF HK+VK+ FSP E Y++T + + D AII+W+V T +MLRAFP T A G + F+WSAD KY+AR+GKD+ISIYELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTMY NFE+FRV E LVPVE +E K+ + AFAWEP G RFA G+ +L V+FY M GG+ E+ L TL+D+ +H+YWSP+GN +LA +G+ NG+LEF+D Q ++ EHF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQG++ E KKD FYQ WRPRP +LL+ E VVKNL+K+EK +++ + + EF++ R+A RR E V L +GYDS+DES Y+V S T + VL KE + Sbjct: 22 DYLSDEEVEDEVTSKAHEEADFCNDYSMSVVVGGLPFVDETKHGKLLNVVKKIFGQVGPVVD--IRMPFGGG-GKTTGFAFVEYEQEAHANDAVRTINNFALDKRHTMLVNKYEDIERFQKTPAEFAAPKVDKFVEPKNLKTWLADPARRDMFVLRHGS---------ETELFWSDKGEI-ELDYAGDREKLNDKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYILTLSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGKDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVHEQLVPVEMLEVKESIVAFAWEPKGTRFATAHGEGQQRLNVSFYDMDGGSKSVKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSDEEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRQEQEFQELLE--KRLASAA----ARRAEYVALLDGYDSEDESEYIVQSHTYDDVLETKEEV 693
BLAST of mRNA_E-siliculosus-1a_F_contig109.621.1 vs. uniprot
Match: A0A0P1APB3_PLAHL (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APB3_PLAHL) HSP 1 Score: 619 bits (1596), Expect = 4.790e-206 Identity = 326/694 (46.97%), Postives = 442/694 (63.69%), Query Frame = 3 Query: 114 YMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGA-GKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2168 Y+S +E + ++ E + D S A+VV LP V E+KH KL VV+K+F ++G + D + PFD ++G T GFAF+ + A A T+N + LDK H + V +E + R PEE+ P F + +WL D RD FVLR+ E E+ WS+K + L Y G+REK+ GK WC +++WSPQG+YL TFH GIALWGGE++EK GRF HK+VK+ FSP E Y++T + + + AII+W+V T +MLRAFP +T G + F+WSAD K++AR+GKD+IS+YELPSM+LLDKKSL+AEGV DF WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTM+ NFE+FRV E LVPVE +E K + AFAWEP G RFA V G+ +L V+FY M GG+ E+ L TL D+ +H+YWSP+GN +LA +G+ NG+LEF+DV Q ++ EHF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQG++ E KK+ FYQ WRPRP +LL+ +E VVKNL+ +EK +++ + + EF++ +A RR E + L +GYDS DES Y+V S T + VL +KE + Sbjct: 23 YLSDEELEDEMTTKAHEEADFANDYSMAIVVGGLPVVDESKHGKLLNVVKKIFGQVGNVVD--IQVPFD-SSGKTTGFAFIEYEQEAHANDAVRTINNFALDKRHTMIVNKYEDMERYVKTPEEFIPPTINSFVEPKNLKTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEL-ELDYAGDREKKNGKQWCSQYVLWSPQGSYLATFHPQGIALWGGEKYEKVGRFAHKNVKLAVFSPHEKYLITLSETEQEAAIIIWDVQTSKMLRAFPAGKSTGVKGEVVQGLMTPFKWSADDKFVARRGKDVISVYELPSMKLLDKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRVHEQLVPVEMLEMKDNIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKSSKEVTLLYTLTDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDVSEQQSITIQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKETFYQFLWRPRPRTLLSESEYNHVVKNLKTFEKRFDQMDRLKERERLAALNAERKREEQEFQELLDRRLAIAA------ARRAEYIALLDGYDSQDESEYIVQSHTYDDVLEIKEEV 693
BLAST of mRNA_E-siliculosus-1a_F_contig109.621.1 vs. uniprot
Match: A0A2D4C7L6_PYTIN (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7L6_PYTIN) HSP 1 Score: 618 bits (1594), Expect = 9.220e-206 Identity = 325/694 (46.83%), Postives = 440/694 (63.40%), Query Frame = 3 Query: 111 DYMSPDEGDGDLAGFERPELNV--DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTA-----ADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDV-PKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2168 DY+S +E + ++A + E + D S VVV LP + +KH KL VV+K+FS++G + D + PF G+T GFAFV F A A T+N + LDK H + V +E L + + P E+ +P+ F + +WL D RD F LR+ E E+ WS+K + SL Y G+REK+ GK WC +++WSP GTYLTTFH G+ALW GE +EK GRF H++VK+ FSP E Y++T + + D AI+VWEV TG++LR+FP+ T G + F+WSAD +++AR+GKD+IS+YELPSM+LLDKKSLKA+G+ DF WSP D VLAYWAPE N PARVS+VE+PSR+ELRQKNL VS+C+L W G +L VKV RHSKSKKT++ NFE+FR+RE LVPVE +E K+ + AF++EP G RFA+V G+ +L V+FY M GG KNEL L TL D+P +H+YWSP GN +LA MG+ NG LEF+D + + ++ EHF+C ++EWDPSGR +AV QP+ S++K QMDNG+ L+SFQG++ E KKD FYQ WRPRP +LL+ E VVKNL+KYE+ ++K + EF + A R E + L GYDS+DE Y+V SRT + V+S E + Sbjct: 22 DYLSDEEVEDEVATQKHEEEDFCNDFSMCVVVGGLPVIDNSKHAKLLNVVKKIFSQVGAVVD--IDMPFG-ANGMTTGFAFVEFEQEAHAADAVRTINNFALDKRHTLLVNKYEDLHKFEATPSEFVAPKIDKFVEPKNLKTWLTDSARRDMFALRHGT---------ETEIFWSDKGEI-SLDYAGDREKQNGKQWCSQYVLWSPHGTYLTTFHPQGVALWAGEHYEKVGRFAHRNVKIAVFSPNENYLITLSETEVDNAIVVWEVKTGKLLRSFPLGKPTGEKGEVVQGIMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGIHDFFWSPTDPVLAYWAPEGNNVPARVSLVELPSRRELRQKNLFNVSDCKLQWHPNGTFLRVKVTRHSKSKKTLFTNFELFRLRESLVPVEMLEMKETIVAFSFEPKGSRFAVVHGEGNQRLNVSFYDMHGGNKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGMGE----MNGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVMSAVCQPIDNSYYKFQMDNGFTLWSFQGKKLLEEKKDAFYQFLWRPRPRNLLSDKEYADVVKNLKKYERRFNEMDRLKERERVAAEKAEKQRQIAEFTELVQARKSAAR------ALRAEYIALLGGYDSEDEDEYIVQSRTFDDVISESEEV 692
BLAST of mRNA_E-siliculosus-1a_F_contig109.621.1 vs. uniprot
Match: A0A3M6VP81_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP81_9STRA) HSP 1 Score: 617 bits (1590), Expect = 3.780e-205 Identity = 330/695 (47.48%), Postives = 441/695 (63.45%), Query Frame = 3 Query: 111 DYMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAA-----DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKG-GAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2168 DY+S +E + ++ E + D S AVVV LP V E+KH KL VV+K+F ++G + D + PFD + G T GFAFV + AK A T+N + LDK H + V +E + R E+ +P+ + F + +WL D RD FVLR+ E E+ WS+K + Y G+REK GK WC +++WSPQGTYL TFH GIALWGG+++EK GRF HK+V FSP E Y++T + + D AII+W+V T +MLRAFP T A G + F+WSA KY+AR+G D+ISIYELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTM+ NFE+FR++E LVPVE +E K + AFAWEP G RFA V G+ +L V+FY M G E+ L TL+D+ +H+YWSP+GN +LA +G+ NG+LEF+D Q ++ EHF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQG++ E KK++FYQ WRPRP +LL+ AE KKVVKNL+KYEK +++ + EF++ L A + RR E + L +GYDS+DE+ Y+V S T + VL KE I Sbjct: 22 DYLSDEEAEDEVTIKANEEEDFCNDFSMAVVVGGLPVVDESKHGKLLNVVKKIFGQVGAVVD--IHMPFDGS-GKTTGFAFVEYEQEAHAKDAVRTINNFALDKRHTMIVNKYEDIERYEKTTTEFVAPKVEKFVEPKNLQTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEI-EFVYAGDREKTNGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVTRAVFSPHENYLITVSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKNEVVQGLMTPFKWSAGDKYVARRGNDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDLILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRLQEQLVPVEMLEIKDNIVAFAWEPKGTRFATVHGEGQQRLSVSFYDMDGENKSTKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKESFYQFLWRPRPRTLLSDAEYKKVVKNLKKYEKRFDQMDRLKERERQAAKNAERNRKVQEFQELLQRLLAAAAV------RRGEYIALLDGYDSEDENEYIVQSHTYDDVLESKEEI 693
BLAST of mRNA_E-siliculosus-1a_F_contig109.621.1 vs. uniprot
Match: A0A5D6XPM0_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPM0_9STRA) HSP 1 Score: 615 bits (1586), Expect = 1.770e-204 Identity = 327/700 (46.71%), Postives = 441/700 (63.00%), Query Frame = 3 Query: 111 DYMSPDEGDGDLAGFERPELNV---DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVP-KLEVTFYTMKGGAG-----KNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2168 DYMS +E + D A ++ + + D S VVV LP V AKH KL V+ K+FS++G + D L+ PF K+ G T GFA V + A +A T+NG+ LDK H + V + + + +S PE + P+ + F + +WL D RD FVLR+ E E+ WS+K + SL Y G REK GK WC +++WSP GTYL TFH PG+ALW GE++EK GRF HK+VK+ FSP ETY++T + + AIIVW+V +G++LR FP T G + F+WSAD +++AR+GKD++S+YELPSM+LL+KKSLKA+GV DF WSP D +LAYWAPE N PARVS+VE+PSR E+RQKNL VS+C+L+W G +L VKV RHSKSKKT++ NFE+FRVREPLVPVE +E K + AFAWEP G RFA V G+ +L V+FY M GGA E+ L TL ++P +H+YWSP+GN +LA +G+ NG LEF+D + + ++ EHF+C ++EWDPSGR T+V QP+ S++K QMDNGY L+SFQG+ E KKD FYQ WRPRP SLL+ E VVKNL+KYEK ++K +++ EF+ R ++ R V L GYDS+DE Y+V++ +VVLS E + Sbjct: 23 DYMSDEEPE-DAAVTQQHDEDAFLRDFSMCVVVGGLPVVDSAKHAKLLAVLTKIFSQVGAVVD--LSMPFGKS-GSTTGFALVAYDQEAHANEAVRTINGFALDKRHTMLVNKYSDVEKFQSTPETFAEPKVEKFAEPKNYKNWLMDSARRDMFVLRHGT---------ETELFWSDKGEI-SLEYDGAREKVNGKQWCSQYVLWSPHGTYLATFHQPGLALWAGEKYEKVGRFAHKNVKIAVFSPNETYLLTVSETDAENAIIVWDVKSGKILRTFPAGKPTGVKGEVVQGLQTPFKWSADDRFVARRGKDVVSVYELPSMKLLEKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRTEIRQKNLFNVSDCKLNWHPNGTFLGVKVTRHSKSKKTLFTNFEMFRVREPLVPVEMLEMKDSIVAFAWEPKGTRFATVHGESQLRLNVSFYDMNGGAAGSKAASTEITLLYTLTEKPCSHLYWSPLGNNIVLAGLGE----MNGSLEFWDTDERQSITAQEHFKCTHVEWDPSGRVVATSVCQPLDNSYYKFQMDNGYNLWSFQGKLLKEEKKDAFYQFLWRPRPRSLLSDKEYANVVKNLKKYEKRFNEMDRLKERERLAAIQAEKNRLRQEFQDLVEARVRA------VQSARATYVSLLGGYDSEDEDEYIVETHVHDVVLSKAEEV 698 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig109.621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig109.621.1 >prot_E-siliculosus-1a_F_contig109.621.1 ID=prot_E-siliculosus-1a_F_contig109.621.1|Name=mRNA_E-siliculosus-1a_F_contig109.621.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=708bp MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVback to top mRNA from alignment at E-siliculosus-1a_F_contig109:65678..74819+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig109.621.1 ID=mRNA_E-siliculosus-1a_F_contig109.621.1|Name=mRNA_E-siliculosus-1a_F_contig109.621.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9142bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig109:65678..74819+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig109:65678..74819+ >mRNA_E-siliculosus-1a_F_contig109.621.1 ID=mRNA_E-siliculosus-1a_F_contig109.621.1|Name=mRNA_E-siliculosus-1a_F_contig109.621.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4248bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig109:65678..74819+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |