mRNA_E-siliculosus-1a_F_contig109.612.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig109.612.1 vs. uniprot
Match: D7FKU6_ECTSI (Tryptophan--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU6_ECTSI) HSP 1 Score: 773 bits (1997), Expect = 1.910e-275 Identity = 394/403 (97.77%), Postives = 397/403 (98.51%), Query Frame = 1 Query: 133 MRTAVRTSSARVVRTQAVAPRAWLRKGGQQRGRAGMTSMSASEVASSTDVAPGKEASLKVPVKKRIVSGVQPTGNLHFGNYLGAIKQWVDNQDKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCKRRRKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKKASTALRKCKTDMHQGLEWDNPDRPECTNLLTIYQAVTGKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISSLKDFQ 1341 MRT++RTS ARVVRTQAVAPRAWLRKGGQQRGRAGMTSMSASEVASSTDVAPGKE SLKVPVKKRIVSGVQPTGNLHFGNYLGAIKQWVDNQDKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCKRRRKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKK LR+CKTDMHQGLEWDNPDRPECTNLLTIYQAVTGKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISSLKDFQ Sbjct: 1 MRTSLRTSPARVVRTQAVAPRAWLRKGGQQRGRAGMTSMSASEVASSTDVAPGKETSLKVPVKKRIVSGVQPTGNLHFGNYLGAIKQWVDNQDKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCKRRRKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKK----LRRCKTDMHQGLEWDNPDRPECTNLLTIYQAVTGKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISSLKDFQ 399
BLAST of mRNA_E-siliculosus-1a_F_contig109.612.1 vs. uniprot
Match: A0A836CM54_9STRA (Tryptophan--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM54_9STRA) HSP 1 Score: 515 bits (1326), Expect = 2.380e-174 Identity = 252/350 (72.00%), Postives = 294/350 (84.00%), Query Frame = 1 Query: 295 EASLKVPVKKRIVSGVQPTGNLHFGNYLGAIKQWVDNQ-DKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCKRRRKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKKASTALRKCKTDMHQGLEWDNPDRPECTNLLTIYQAVTGKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISSLKDFQ 1341 E + KV K+RI+SGVQPTG+LH GNYLGAIKQWV Q D Y+NFF VDLHAITVP DPK LK + AAATYLAAG+DP KSK+FVQSHV AH+ELTWLL C TP++WLE+MIQ+KEK KQGENVG GL YPVLMA+DILLY+ DLVPVGEDQRQHLELTRD+ARRFNDQ+CKR+R K+P ALI+K+GARVMSL DGTSKMSKSDP +GSRINLTDS DVIA+K ++KCKTD GLEW NP+RPECTNLLT+YQA++G+TREEV EV M WG FKPLLADA V HL P+Q RY++I++D++YL++VLR+GAEAADEVAS+TL WAK+AMG SLKD Q Sbjct: 23 EGAAKVARKQRILSGVQPTGSLHLGNYLGAIKQWVARQEDGYENFFCAVDLHAITVPHDPKKLKQDTMMAAATYLAAGVDPAKSKIFVQSHVSAHSELTWLLNCMTPMSWLERMIQYKEKARKQGENVGVGLFDYPVLMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQYCKRKRPVLKEPTALILKDGARVMSLQDGTSKMSKSDPNDGSRINLTDSADVIARK----IKKCKTDAFDGLEWGNPERPECTNLLTLYQALSGQTREEVEKEVTGMRWGAFKPLLADAAVAHLSPIQLRYEEIMQDKAYLHQVLREGAEAADEVASQTLSWAKDAMGFCSLKDLQ 368
BLAST of mRNA_E-siliculosus-1a_F_contig109.612.1 vs. uniprot
Match: A0A6V1Q501_HETAK (Tryptophan--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q501_HETAK) HSP 1 Score: 494 bits (1272), Expect = 1.440e-165 Identity = 247/371 (66.58%), Postives = 294/371 (79.25%), Query Frame = 1 Query: 232 AGMTSMSASEVASSTDVAPGKEASLKVPVKKRIVSGVQPTGNLHFGNYLGAIKQWVDNQDKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCKRR-RKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKKASTALRKCKTDMHQGLEWDNPDRPECTNLLTIYQAVTGKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISSLKDFQ 1341 AG+ S+ S V +S + A E +KV KKR++SGVQPTG+LH GNYLGAI+QWV NQD+Y+NFF VVDLHAIT P DPK LK + +AA YLAAGIDP KS +FVQSHV AHAEL WLL C TP+NWLE+MIQFKEK KQGENVG GL YPVLMA+DILLY+ D VPVGEDQRQHLELTRD+A RFNDQF KR+ R FK P LI +EGARVMSL DGTSKMSKS + SRINL DSP+VI +K ++KCKTD QG+EWDNP+RPECTNLLTIYQA TGK++E V EVG+M+WG FKP+LADA V+HL P+QARY +++ D ++LN+VLR+GA AADEVA +TL W K AMG ++L+D + Sbjct: 45 AGVRSVLYSSVPASEEAAK-PETEIKVERKKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYENFFCVVDLHAITAPHDPKELKKSTLQSAALYLAAGIDPAKSNIFVQSHVTAHAELAWLLNCVTPMNWLERMIQFKEKARKQGENVGVGLFDYPVLMAADILLYQTDCVPVGEDQRQHLELTRDIAGRFNDQFVKRKMRPVFKQPTPLIAEEGARVMSLQDGTSKMSKSAENDNSRINLNDSPEVIRRK----IKKCKTDQFQGMEWDNPERPECTNLLTIYQACTGKSKEAVLAEVGEMNWGAFKPVLADAVVDHLAPIQARYAELMADPTHLNRVLREGAAAADEVAQQTLLWTKNAMGFTTLEDLE 410
BLAST of mRNA_E-siliculosus-1a_F_contig109.612.1 vs. uniprot
Match: A0A7S1TX50_9STRA (Tryptophan--tRNA ligase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX50_9STRA) HSP 1 Score: 485 bits (1248), Expect = 1.230e-162 Identity = 236/349 (67.62%), Postives = 281/349 (80.52%), Query Frame = 1 Query: 292 KEASLKVPVKKRIVSGVQPTGNLHFGNYLGAIKQWVDNQDKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCKRRRKT---FKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKKASTALRKCKTDMHQGLEWDNPDRPECTNLLTIYQAVTGKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISSL 1329 K+A + P R++SGVQPTGNLH GNYLGAI+QWV NQD YDN+F VVDLHAIT+P DPK L+ + AAATYLAAGIDP KSK+FVQSHV AHAELTWLL C TPINWLE+MIQ+KEK KQGENVG GL YPVLMASDILLY+ DLVPVGEDQ+QHLELTRD+ARR+ND FCK+ +K F++P+ALIVKEGAR+MSL DGTSKMSKS E SRI+LTD+PDVIA+K ++KCKTD QG+EWDNP+RPE NLL IYQAV+G +RE + EV +M+WG FKPLL DA VEHL P+Q +Y +++ D YL+ VL+DGA+ A+EVA TL WAK MG ++L Sbjct: 21 KKAPARTP---RVLSGVQPTGNLHLGNYLGAIRQWVQNQDMYDNYFCVVDLHAITMPHDPKQLEKDTLEAAATYLAAGIDPAKSKIFVQSHVRAHAELTWLLNCITPINWLERMIQYKEKAKKQGENVGVGLFDYPVLMASDILLYQADLVPVGEDQKQHLELTRDIARRYNDMFCKKGKKVRRVFREPEALIVKEGARIMSLQDGTSKMSKSAENENSRISLTDTPDVIARK----IKKCKTDQFQGIEWDNPERPEAANLLNIYQAVSGLSREAILAEVSEMNWGAFKPLLTDAVVEHLSPIQTKYNEVMADPVYLHGVLKDGADGANEVAEATLSWAKNGMGFANL 362
BLAST of mRNA_E-siliculosus-1a_F_contig109.612.1 vs. uniprot
Match: A0A6U5CKF4_HEMAN (Tryptophan--tRNA ligase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U5CKF4_HEMAN) HSP 1 Score: 483 bits (1242), Expect = 3.480e-160 Identity = 227/349 (65.04%), Postives = 283/349 (81.09%), Query Frame = 1 Query: 307 KVPVKKRIVSGVQPTGNLHFGNYLGAIKQWVDNQDKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCKRR------RKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKKASTALRKCKTDMHQGLEWDNPDRPECTNLLTIYQAVTGKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISSLKD 1335 K VKKR++SGVQPTGNLH GNYLGAI+QWV NQD+Y+N+FFVVDLHAIT+P P LK + A YLA GIDP KSK+F+QSHV HAEL WLL C TP+ W+EKMIQ+KEK KQGE+V GL YP+LMA+DILLY+ LVPVGEDQRQHLEL+RD+ARRFND +CK++ R+ F+DP+ALIVKEGAR+MSL DGTSKMSKSDP EGSRINL+DSPDVI KK +++CKTD G+EWDNP+RPECTNLL I+QA +G++RE++ EV DM WG FKP+LA+ VEHL P+QARY+++++D++YL++VLR+GAE A+EVA++T+ W K AMG +S D Sbjct: 123 KPAVKKRVISGVQPTGNLHLGNYLGAIRQWVKNQDEYENYFFVVDLHAITMPHSPAELKKASYDIVALYLACGIDPTKSKIFIQSHVTQHAELCWLLNCVTPMGWMEKMIQYKEKAKKQGESVSVGLFDYPILMAADILLYQAQLVPVGEDQRQHLELSRDIARRFNDLYCKKKSMPAKGRRVFRDPEALIVKEGARIMSLEDGTSKMSKSDPSEGSRINLSDSPDVIRKK----IKRCKTDNFDGIEWDNPERPECTNLLNIFQACSGRSREDILEEVKDMRWGEFKPVLAEVVVEHLAPIQARYQELVDDKTYLHQVLREGAEGAEEVAAQTMQWTKNAMGFTSRAD 467
BLAST of mRNA_E-siliculosus-1a_F_contig109.612.1 vs. uniprot
Match: A0A7S0VG95_9CRYP (Tryptophan--tRNA ligase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VG95_9CRYP) HSP 1 Score: 481 bits (1237), Expect = 1.900e-159 Identity = 231/367 (62.94%), Postives = 287/367 (78.20%), Query Frame = 1 Query: 265 ASSTDVAPGKEASL----KVPVKKRIVSGVQPTGNLHFGNYLGAIKQWVDNQDKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCKRR------RKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKKASTALRKCKTDMHQGLEWDNPDRPECTNLLTIYQAVTGKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISSLKD 1335 A+STD K+A K VKKR++SGVQPTGNLH GNYLGAI+QW NQD+Y+N+FFVVDLHAIT+P P L + A YLA GIDP KS++F+QSHV HAEL WLL C TP+ W+EKMIQ+KEK KQGE+V GL YP+LMA+DIL+Y+ LVPVGEDQRQHLEL RD+ARRFND +CK++ R+ F+DP+ALIVKEGAR+MSL DG SKMSKSDP EGSRINL+DS +VI KK +++CKTD +G+EWDNPDRPECTNLL I+QA +G+TRE++ EV DM WG FKPLLAD V+HL P+QARYK++++D++YL++VLR+GAE A+EVA++TL W K AMG +S D Sbjct: 104 AASTDAKEEKKAEEEEDGKPAVKKRVISGVQPTGNLHLGNYLGAIRQWAQNQDEYENYFFVVDLHAITMPHSPAELTQSSYDIVALYLACGIDPTKSRIFIQSHVPQHAELCWLLNCVTPMGWMEKMIQYKEKAKKQGESVSVGLFDYPILMAADILIYQAQLVPVGEDQRQHLELARDIARRFNDLYCKKKSMPAKGRRVFRDPEALIVKEGARIMSLEDGRSKMSKSDPSEGSRINLSDSEEVIRKK----IKRCKTDNFEGIEWDNPDRPECTNLLNIFQACSGRTREDILAEVSDMKWGEFKPLLADVVVDHLAPIQARYKELVDDKTYLHQVLREGAEGAEEVAAQTLTWTKNAMGFTSRSD 466
BLAST of mRNA_E-siliculosus-1a_F_contig109.612.1 vs. uniprot
Match: A0A7S4EDW2_9STRA (Tryptophan--tRNA ligase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDW2_9STRA) HSP 1 Score: 460 bits (1183), Expect = 9.660e-153 Identity = 223/335 (66.57%), Postives = 269/335 (80.30%), Query Frame = 1 Query: 319 KKRIVSGVQPTGNLHFGNYLGAIKQWVDNQDKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCKRRRKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKKASTALRKCKTDMHQGLEWDNPDRPECTNLLTIYQAVTGKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGIS 1323 ++R++SGVQPTG LH GNYLGAI+QWV QD YD+FF VVDLHAIT P +PK L+ ++AAA Y+AAGIDPEKS +FVQSHV AHAEL WLL C TPINWLE+MIQ+KEKK KQGENVG GL YPVLMA+DILLY+ LVPVGEDQRQHLELTRD+ARRF+D +CKR+++ F++P+ALIVKEGARVMSLTDG +KMSKS ++ SRINL D P IA+K ++KCK+D GLEWDNP+RPE TNLL IYQAVTG R+ + EVGD+SWG FKP LADA V HL P+Q +Y ++ D++YL+ VL+ GAE ADE A+ TL AK AMG + Sbjct: 42 RERVLSGVQPTGTLHLGNYLGAIRQWVQFQDDYDSFFCVVDLHAITAPHNPKLLQQETLDAAALYIAAGIDPEKSPIFVQSHVTAHAELCWLLNCMTPINWLERMIQYKEKKQKQGENVGVGLFDYPVLMAADILLYQAGLVPVGEDQRQHLELTRDIARRFHDLYCKRKKRVFREPKALIVKEGARVMSLTDGRAKMSKSAELDNSRINLNDDPATIARK----IKKCKSDEFTGLEWDNPERPEATNLLNIYQAVTGMERDAILAEVGDLSWGGFKPRLADAVVAHLEPIQLKYAEVSADKAYLSGVLKSGAERADETATRTLDAAKAAMGFA 372
BLAST of mRNA_E-siliculosus-1a_F_contig109.612.1 vs. uniprot
Match: A0A7S4DXD9_9EUKA (Tryptophan--tRNA ligase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DXD9_9EUKA) HSP 1 Score: 461 bits (1186), Expect = 3.060e-152 Identity = 228/358 (63.69%), Postives = 278/358 (77.65%), Query Frame = 1 Query: 295 EASLKVPVKKRIVSGVQPTGNLHFGNYLGAIKQWVDNQDKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCKRR---------RKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKKASTALRKCKTDMHQGLEWDNPDRPECTNLLTIYQAVTGKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISSLKDFQ 1341 EA+ K KKR++SG+QPTG++H GNYLGA+KQWVDNQDKYDNFF +VDLHAITVP PK LK V AA YLA GIDP KSK+F+QSHV AH+ELTWLL CATP+NWLE+MIQ+KEK KQG++V LL YPVLMASDILLY+ DLVPVGEDQ+QHLELTRD+ARRFNDQ+CK R FK+P+ L+ KE ARVMSL DGTSKMSKS P E SRINL DSPDVI +K ++KCKTD G+E+ NP+RPE TNLLT+Y TG+ E++ EV DMSWG FKPL+ADA VE LRP++ RY ++ +D + +VL+DGAEAA+EVAS T WA++AMG +S+++ + Sbjct: 73 EATEKPERKKRVLSGIQPTGSVHLGNYLGAMKQWVDNQDKYDNFFCIVDLHAITVPHVPKELKKSVAQTAALYLACGIDPAKSKIFIQSHVPAHSELTWLLNCATPLNWLERMIQYKEKAKKQGDSVSVALLDYPVLMASDILLYQADLVPVGEDQKQHLELTRDIARRFNDQYCKGNQAKKLRGTSRPVFKEPEVLMAKEAARVMSLQDGTSKMSKSAPSELSRINLLDSPDVIREK----IKKCKTDSELGIEYKNPNRPEATNLLTMYSQATGRPVEDLLGEVSDMSWGQFKPLVADALVEQLRPIRERYDEVTKDPEVIAQVLQDGAEAANEVASATASWARQAMGFTSVEEIK 426
BLAST of mRNA_E-siliculosus-1a_F_contig109.612.1 vs. uniprot
Match: F0YGR9_AURAN (Tryptophan--tRNA ligase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGR9_AURAN) HSP 1 Score: 454 bits (1168), Expect = 5.390e-151 Identity = 215/337 (63.80%), Postives = 274/337 (81.31%), Query Frame = 1 Query: 316 VKKRIVSGVQPTGNLHFGNYLGAIKQWVDNQDKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCKRRRKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKKASTALRKCKTDMHQGLEWDNPDRPECTNLLTIYQAVTGKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISS 1326 +++R++SGVQPTG+LH GNYLGAI+QWV+ Q +YD+ F VVDLHAIT+P D K+L ++AAA Y+AAG++P+ + +FVQSHV AHAEL WLL C TP+NWLE+MIQ+KEKK KQGENV GL YPVLMA+DILLY+ DLVPVGEDQRQHLELTRD+ARRF+D +CKR+R+ F++P+ALIVKEGARVMSL DG +KMSKS P++GSRINL DSPD+IA K ++KCKTD +GLEWDNP+RPE TNLL IYQ+VTG RE + +V D+SWG FKP L DA + HL P+Q YK++ D+ +L++ L+ GA ADE+A++TL AK AMGI++ Sbjct: 6 MRERVLSGVQPTGSLHLGNYLGAIRQWVEYQHEYDSLFCVVDLHAITMPHDAKSLSRETLDAAALYIAAGVEPDIAPIFVQSHVSAHAELAWLLNCMTPMNWLERMIQYKEKKQKQGENVAVGLFDYPVLMAADILLYQADLVPVGEDQRQHLELTRDIARRFHDLYCKRKRRVFREPKALIVKEGARVMSLADGKAKMSKSAPIDGSRINLVDSPDLIASK----IKKCKTDQLKGLEWDNPNRPEATNLLNIYQSVTGLEREVILRDVSDLSWGAFKPRLTDAIIAHLDPIQRAYKELAADQLFLSQTLKQGAHRADEIATKTLDDAKGAMGITT 338
BLAST of mRNA_E-siliculosus-1a_F_contig109.612.1 vs. uniprot
Match: L1J3P0_GUITC (Tryptophan--tRNA ligase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J3P0_GUITC) HSP 1 Score: 451 bits (1161), Expect = 8.340e-150 Identity = 217/346 (62.72%), Postives = 268/346 (77.46%), Query Frame = 1 Query: 316 VKKRIVSGVQPTGNLHFGNYLGAIKQWVDNQDKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCKRR------RKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKKASTALRKCKTDMHQGLEWDNPDRPECTNLLTIYQAVTGKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISSLKD 1335 V+KR++SGVQPTGNLH GNYLGAI+QWV NQD+Y+N+F VVDLHAIT P P L+ ++ AA YLA+GIDP KSKVF+QSHV AHAEL WLL C TP+NW+EKMIQ+KEK KQGE+V GL YP+LMA+DILLY+ LVPVGEDQRQHLEL RD+ARRFNDQ+CK++ R+ F++P+ALIVKEGARVMSL DGTSKMSKSDP + SRINL D P+VI + +EWDNP+RPECTNLL IYQ+VTGK++E++ EV M WG FKPLL++A + HL P+Q +YKD++ED++YL +VL DGA +AD +A +TL W K AMG +S D Sbjct: 19 VRKRVLSGVQPTGNLHLGNYLGAIRQWVKNQDEYENYFCVVDLHAITAPHVPSELQKSSLDIAALYLASGIDPAKSKVFIQSHVPAHAELCWLLNCVTPMNWMEKMIQYKEKAKKQGESVSIGLFDYPILMAADILLYQAQLVPVGEDQRQHLELARDIARRFNDQYCKKKSMPAKGRRVFREPEALIVKEGARVMSLQDGTSKMSKSDPSDLSRINLLDPPEVIGGR---------------IEWDNPERPECTNLLNIYQSVTGKSKEDILSEVQHMQWGQFKPLLSEAVIAHLAPIQVKYKDLMEDQTYLKQVLLDGANSADLIAGQTLSWTKNAMGFTSKSD 349 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig109.612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig109.612.1 >prot_E-siliculosus-1a_F_contig109.612.1 ID=prot_E-siliculosus-1a_F_contig109.612.1|Name=mRNA_E-siliculosus-1a_F_contig109.612.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=436bp MAPRGRLGNETLVRALVMAACCLVSGTSFGVGMRTAVRTSSARVVRTQAVback to top mRNA from alignment at E-siliculosus-1a_F_contig109:9850..16645- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig109.612.1 ID=mRNA_E-siliculosus-1a_F_contig109.612.1|Name=mRNA_E-siliculosus-1a_F_contig109.612.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6796bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig109:9850..16645- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig109:9850..16645- >mRNA_E-siliculosus-1a_F_contig109.612.1 ID=mRNA_E-siliculosus-1a_F_contig109.612.1|Name=mRNA_E-siliculosus-1a_F_contig109.612.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2616bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig109:9850..16645- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |