mRNA_E-siliculosus-1a_F_contig10895.609.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10895.609.1 vs. uniprot
Match: A0A6H5KBR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR9_9PHAE) HSP 1 Score: 327 bits (838), Expect = 4.930e-103 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1 Query: 1 MKAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRCRGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPK 495 MKAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRCRGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPK Sbjct: 882 MKAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRCRGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPK 1046
BLAST of mRNA_E-siliculosus-1a_F_contig10895.609.1 vs. uniprot
Match: D8LFI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI) HSP 1 Score: 329 bits (843), Expect = 2.300e-101 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1 Query: 1 MKAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRCRGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPKV 498 MKAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRCRGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPKV Sbjct: 836 MKAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRCRGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPKV 1001
BLAST of mRNA_E-siliculosus-1a_F_contig10895.609.1 vs. uniprot
Match: A0A835YLJ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLJ6_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.440e-72 Identity = 118/168 (70.24%), Postives = 139/168 (82.74%), Query Frame = 1 Query: 1 MKAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRC--RGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPKV 498 ++A VL+RLFK+V GSV+LF NE +LRPHLQTI+LSCLRYTTRV +P NYY LLRALFRSI+GGKF+ SYKEI P+LPLLLTELSKL+ A++ + IL+ELCLTVP RLASLLPHLPLM+RLMV AL RG+L GLALRTLEFWVDNL PDY ++S DP + Sbjct: 114 LRASVLMRLFKLVLGSVSLFGPNETVLRPHLQTIILSCLRYTTRVNNPLNYYLLLRALFRSIAGGKFDHSYKEILPILPLLLTELSKLYSTAQDDLTRAILIELCLTVPVRLASLLPHLPLMLRLMVRALSAQQRGELHGLALRTLEFWVDNLMPDYCCAVLSQDPAL 281
BLAST of mRNA_E-siliculosus-1a_F_contig10895.609.1 vs. uniprot
Match: A0A0P1AHC8_PLAHL (Phosphatidylinositol kinase (PIK-L3) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHC8_PLAHL) HSP 1 Score: 192 bits (487), Expect = 1.820e-53 Identity = 95/165 (57.58%), Postives = 126/165 (76.36%), Query Frame = 1 Query: 4 KAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRCRGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPKV 498 +A ++LRLFK+VFGSVTLF NE L PHL+TI+ SCL+ T K P NY LLRALFRSISGGK+E+ YKE++PLLP +L+ L +LH + ++ +L+ELCLT+PARL+SLL +LP +M+ +V A+ RG+L L LRTLEFWVDNLNPD+LY IM+ ++ Sbjct: 792 RASIILRLFKIVFGSVTLFKSNESALFPHLRTIIESCLKQATFTKHPDNYLLLLRALFRSISGGKYENFYKEVFPLLPGVLSALMRLHIHISKPVMEEVLLELCLTIPARLSSLLQYLPSLMKSVVRAILSRGELAYLGLRTLEFWVDNLNPDFLYPIMTSQDRL 956
BLAST of mRNA_E-siliculosus-1a_F_contig10895.609.1 vs. uniprot
Match: A0A8K1CS31_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS31_PYTOL) HSP 1 Score: 192 bits (487), Expect = 1.820e-53 Identity = 94/165 (56.97%), Postives = 127/165 (76.97%), Query Frame = 1 Query: 4 KAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRCRGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPKV 498 +A ++LRLFK+VFGSVTLF NE L PHL+TI+ SCL+ T K P NY LLRALFRSISGGK+E+ YKE++PLLP +L+ L +L ++ +++ +L+ELCLT+PARL+SLL +LP +M+ +V A+ RG+L L LRTLEFWVDNLNPD+LY IM+ ++ Sbjct: 841 RASIVLRLFKIVFGSVTLFKSNESALFPHLRTIIESCLKQATYTKHPDNYLLLLRALFRSISGGKYENFYKEVFPLLPGILSALMRLQKHIQKPAMQEVLLELCLTIPARLSSLLQYLPSLMKSVVRAILSRGELAYLGLRTLEFWVDNLNPDFLYPIMTSQDRL 1005
BLAST of mRNA_E-siliculosus-1a_F_contig10895.609.1 vs. uniprot
Match: A0A7R9U8N6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8N6_9STRA) HSP 1 Score: 191 bits (486), Expect = 2.430e-53 Identity = 93/165 (56.36%), Postives = 125/165 (75.76%), Query Frame = 1 Query: 4 KAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRCRGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPKV 498 +A +LLRLFK+ FGSVTLF +NE +LRPHLQ IV CLR+ P N++ LLR+LFRSISGGKFE+SY E+ LLP++LT +L+ A + +I++I++EL L +P++L+ LLPHLPL+M LM+ ALR G+L L +RT EFWVDNLNPD+LY I+ D K+ Sbjct: 679 EASILLRLFKITFGSVTLFHQNEEILRPHLQNIVWGCLRHCAICDAPGNFFVLLRSLFRSISGGKFENSYGELKALLPVILTSFLRLYRSAVDETIRSIIIELSLIIPSKLSYLLPHLPLLMHLMLEALRSEGELVNLGIRTFEFWVDNLNPDFLYSILEQDEKL 843
BLAST of mRNA_E-siliculosus-1a_F_contig10895.609.1 vs. uniprot
Match: A0A5D6XXH6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH6_9STRA) HSP 1 Score: 191 bits (485), Expect = 3.380e-53 Identity = 94/165 (56.97%), Postives = 128/165 (77.58%), Query Frame = 1 Query: 4 KAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRCRGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPKV 498 +A ++LRLFK+VFGSVTLF NE L PHL+T++ SCL+ T K P NY LLRALFRSISGGK+E+ YKE++PLLP +L+ L +L ++S++++L+ELCLT+PARL+SLL +LP +M+ +V A+ RG+L L LRTLEFWVDNLNPD+LY IM+ ++ Sbjct: 833 RASIVLRLFKIVFGSVTLFKSNESALFPHLRTLIESCLKEATFTKHPDNYLLLLRALFRSISGGKYENFYKEVFPLLPGVLSALMRLQKHIGKLSMQDVLLELCLTIPARLSSLLQYLPSLMKSVVRAILSRGELAYLGLRTLEFWVDNLNPDFLYPIMTSQDRL 997
BLAST of mRNA_E-siliculosus-1a_F_contig10895.609.1 vs. uniprot
Match: A0A1V9ZBZ5_9STRA (Phosphatidylinositol kinase (PIK-L3) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBZ5_9STRA) HSP 1 Score: 190 bits (483), Expect = 6.270e-53 Identity = 96/165 (58.18%), Postives = 125/165 (75.76%), Query Frame = 1 Query: 4 KAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRCRGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPKV 498 KA ++LRLFK+VFGSVTLF NE L PHL+TI++SCL T P NY LLRALFRSISG KFE+ YKE+ PLLP LL+ L +L ++ S++++L+ELCLT+PARL+SLL +LP +MR +V A+ RG+L L LRTLE+WVDNLNPD+LY IM+ ++ Sbjct: 741 KASIVLRLFKIVFGSVTLFKSNESALFPHLKTIIVSCLTKATETPYPDNYLLLLRALFRSISGVKFENFYKEVLPLLPGLLSALMRLQKHIKKPSLQDVLLELCLTIPARLSSLLQYLPSLMRSVVQAMLSRGELANLGLRTLEYWVDNLNPDFLYPIMTSQERL 905
BLAST of mRNA_E-siliculosus-1a_F_contig10895.609.1 vs. uniprot
Match: A0A421GWP2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GWP2_9STRA) HSP 1 Score: 190 bits (482), Expect = 8.290e-53 Identity = 94/165 (56.97%), Postives = 126/165 (76.36%), Query Frame = 1 Query: 4 KAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRCRGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPKV 498 +A ++LRLFK+VFGSVTLF NE L PHL+TI+ SCL+ T K P NY LLRALFRSISGGK+E+ YKE++PLLP +L+ L +L + +++ +L+ELCLT+PARL+SLL +LP +M+ +V A+ RG+L L LRTLEFWVDNLNPD+LY IM+ ++ Sbjct: 780 RASIVLRLFKIVFGSVTLFKSNESALFPHLRTIIESCLKQATFTKHPDNYLLLLRALFRSISGGKYENFYKEVFPLLPGVLSALMRLQKHIGKPAMREVLLELCLTIPARLSSLLQYLPSLMKSVVRAILSRGELAYLGLRTLEFWVDNLNPDFLYPIMTSQDRL 944
BLAST of mRNA_E-siliculosus-1a_F_contig10895.609.1 vs. uniprot
Match: A0A3F2RXB1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXB1_9STRA) HSP 1 Score: 190 bits (482), Expect = 8.520e-53 Identity = 94/165 (56.97%), Postives = 126/165 (76.36%), Query Frame = 1 Query: 4 KAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNYYFLLRALFRSISGGKFESSYKEIYPLLPLLLTELSKLHHRAEEVSIKNILVELCLTVPARLASLLPHLPLMMRLMVHALRCRGDLDGLALRTLEFWVDNLNPDYLYRIMSHDPKV 498 +A ++LRLFK+VFGSVTLF NE L PHL+TI+ SCL+ T K P NY LLRALFRSISGGK+E+ YKE++PLLP +L+ L +L + +++ +L+ELCLT+PARL+SLL +LP +M+ +V A+ RG+L L LRTLEFWVDNLNPD+LY IM+ ++ Sbjct: 780 RASIVLRLFKIVFGSVTLFKSNESALFPHLRTIIESCLKQATFTKHPDNYLLLLRALFRSISGGKYENFYKEVFPLLPGVLSALMRLQKHIGKPAMREVLLELCLTIPARLSSLLQYLPSLMKSVVRAILSRGELAYLGLRTLEFWVDNLNPDFLYPIMTSQDRL 944 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10895.609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10895.609.1 >prot_E-siliculosus-1a_F_contig10895.609.1 ID=prot_E-siliculosus-1a_F_contig10895.609.1|Name=mRNA_E-siliculosus-1a_F_contig10895.609.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=167bp MKAQVLLRLFKVVFGSVTLFPKNERMLRPHLQTIVLSCLRYTTRVKDPTNback to top mRNA from alignment at E-siliculosus-1a_F_contig10895:678..1682- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10895.609.1 ID=mRNA_E-siliculosus-1a_F_contig10895.609.1|Name=mRNA_E-siliculosus-1a_F_contig10895.609.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1005bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10895:678..1682- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10895:678..1682- >mRNA_E-siliculosus-1a_F_contig10895.609.1 ID=mRNA_E-siliculosus-1a_F_contig10895.609.1|Name=mRNA_E-siliculosus-1a_F_contig10895.609.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1002bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10895:678..1682- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |