mRNA_E-siliculosus-1a_F_contig1088.599.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1088.599.1 vs. uniprot
Match: D8LTC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC3_ECTSI) HSP 1 Score: 795 bits (2054), Expect = 1.550e-286 Identity = 441/447 (98.66%), Postives = 441/447 (98.66%), Query Frame = 1 Query: 34 MAPMMTSLRCVAQRPAQGCSLLRRKWALLSRGLSSAGTGGDDSGGGGDGADFGVRVWGHGTKGQLGIESEKLPNKETLMGRLGREKATSTPTPLPGFEASGARTVSCGSEFTALVTTEGKLLTVGTNSKKGLLGLGIADGRNRHKMTEVPALKGVDVVSVACGEQHSVAVDSEGVAYSWGSGGSRWDGAGALGLGNLEDENFLVSSPTEITTLSGVGAKVAKVSAGGSHTAFLTTDGEVWTCGRGEYGLCGNGGTEDQLTPAPLEAFEEHIIVDVQAGHAFALALTSEGEVLGWGRNDQGQLGLGGGLTMDVYAAEVLPRTIDALVDEKVVSIGAGYNHASAVTESGKLYMWGMKRSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGSGGTYCLGNGTGGKSQTRNQPERVKPLSRVEVAHITCGASHTAALIRPRPREG 1374
MAPMMTSLRCVAQRPAQGCSLLRRKW LLSRGLSSAGTGGD SGGGGDGADFGVRVWGHGTKGQLGIESEKLPNKETLMGRLGREKATSTPTPLPGFEASGARTVSCGSEFTALVTTEGKLLTVGTNSKKGLLGLGI DGRNRHKMTEVPALKGVDVVSVACGEQHSVAVDSEGVAYSWGSGGSRWDGAGALGLGNLEDE FLVSSPTEITTLSGVGAKV KVSAGGSHTAFLTTDGEVWTCGRGEYGLCGNGGTEDQLTPAPLEAFEEHIIVDVQAGHAFALALTSEGEVLGWGRNDQGQLGLGGGLTMDVYAAEVLPRTIDALVDEKVVSIGAGYNHASAVTESGKLYMWGMKRSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGSGGTYCLGNGTGGKSQTRNQPE VKPLSRVEVAHITCGASHTAALIRPRPREG
Sbjct: 1 MAPMMTSLRCVAQRPAQGCSLLRRKWVLLSRGLSSAGTGGD-SGGGGDGADFGVRVWGHGTKGQLGIESEKLPNKETLMGRLGREKATSTPTPLPGFEASGARTVSCGSEFTALVTTEGKLLTVGTNSKKGLLGLGIVDGRNRHKMTEVPALKGVDVVSVACGEQHSVAVDSEGVAYSWGSGGSRWDGAGALGLGNLEDEKFLVSSPTEITTLSGVGAKVDKVSAGGSHTAFLTTDGEVWTCGRGEYGLCGNGGTEDQLTPAPLEAFEEHIIVDVQAGHAFALALTSEGEVLGWGRNDQGQLGLGGGLTMDVYAAEVLPRTIDALVDEKVVSIGAGYNHASAVTESGKLYMWGMKRSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGSGGTYCLGNGTGGKSQTRNQPESVKPLSRVEVAHITCGASHTAALIRPRPREG 446
BLAST of mRNA_E-siliculosus-1a_F_contig1088.599.1 vs. uniprot
Match: A0A835Z3W4_9STRA (Putative regulator of chromosome condensation like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W4_9STRA) HSP 1 Score: 262 bits (669), Expect = 4.410e-78 Identity = 162/385 (42.08%), Postives = 203/385 (52.73%), Query Frame = 1 Query: 301 TPTPLPGFEASGARTVSCGSEFTALVTTEGKLLTVGTNSKKGLLGLGIADGRNRHKMTEVP----------ALKGVDV-------------VSVACGEQHSVAVDSEGVAYSWGSGGSRWDGAGALGLGNLEDENFLVSSPTEITTLSGVGAKVAKVSAGGSHTAFLTTDGEVWTCGRGEYGLCGNGGTEDQLTPAPLEAFEEHIIVDVQAGHAFALALTSEGEVLGWGRNDQGQLGLGGGLTMDVYAAEVLPRTI---DALVDEKVVSIGAGYNHASAVTESGKLYMWGMKRSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGSGGTYCLGNGTGGKSQTRNQPERVKPLSR--VEVAHITCGASHTAALIRPRPRE 1371
+P PLPGFE G R V+CG TA+VTT G+LLT G S LG N + T V +L V SVACG+ H+ A+D +G+ Y+WG GGS + G GALG G+ + V P + ++ V K +V AG +HTA LT DGEVW CG GEYG GNGGT D TP P+ E+ +I + GHAF LAL S GE+ GWGRND GQLGLGGG +MDVYA E LPR + AL +K+V++ AG++HA AVT+ GKLYMWGMKR LE T G G + CLG+G + T QP V+ R + V + CG H AAL+ P E
Sbjct: 15 SPVPLPGFEKGGVRDVACGQNHTAVVTTSGELLTFGNGS---YFKLGHGARVNVKEPTVVQEXXXXXXXXQSLSDAGVRLRSSXXXXXXXXXSVACGDSHTAAIDEDGLLYTWGWGGSLFSGGGALGHGSTSGD---VKEPQLVEAVADV-LKAVQVGAGENHTAILTDDGEVWACGAGEYGRLGNGGTSDCATPTPVLGLEDKVITRLSVGHAFTLALASTGELYGWGRNDAGQLGLGGGFSMDVYAMENLPRQVAEDHALGTKKIVAMAAGHSHACAVTDDGKLYMWGMKRYLEPEHMSVMDNETVTDVGCGDKYAAVITQQGDMFTFGKGRSNCLGHGA---TTTLPQPTLVEFFERHNLRVVKVACGHRHVAALVIPPDDE 389
BLAST of mRNA_E-siliculosus-1a_F_contig1088.599.1 vs. uniprot
Match: F0W0Y9_9STRA (Regulator of chromosome condensation (RCC1)like protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0Y9_9STRA) HSP 1 Score: 240 bits (613), Expect = 6.240e-70 Identity = 146/393 (37.15%), Postives = 196/393 (49.87%), Query Frame = 1 Query: 193 VRVWGHGTKGQLGIESEKLPNKETLMGRLGREKATSTPTPLPGFEASGARTVSCGSEFTALVTTEGKLLTVGTNSKKGLLGLGIADGRNRHKMTEVP----ALKGVDVVSVACGEQHSVAVDSEGVAYSWGSGGSRWDGAGALGLGNLEDENFLVSSPTEITTLSGVGAKVAKVSAGGSHTAFLTTDGEVWTCGRGEYGLCGNGGTEDQLTPAPLEAFEEHIIVDVQAGHAFALALTSEGEVLGWGRNDQGQLGLGGGLTMDVYAAEVLPRTIDALVDEKVVSIGAGYNHASAVTESGKLYMWGMKRSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGSGGTYCLGNGTGGKSQTRNQPERVKPLSRVEVAHITCGASHTAALIRP 1359
V WG GT+GQLG S + + L +P L FE + G+ +A + EGKL T G+N L G + + +P AL+G+ +V ++CGE H+ AVD EG ++WG GGS G+GALG EDE+ P + TL G V V G HT LT DGE+W G GEYG GNG +++ P P+E F + I + AG F A+T GEV WG N QLGLGGGLT+D Y E +P ++AL + V + AGY+HA+AVT GK++MWG K LE T G G + CLG+G + +T+ QP V+ L+R V +TCG SH AL +P
Sbjct: 7 VFTWGTGTQGQLGHGSFEKTGIRSSYEEL-------SPRILETFEGKNIAKLDFGATHSAAIDKEGKLYTWGSNEYHQL-----GHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESI----PRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWGAKLWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHG---ERKTQLQPLLVESLNRYNVVSMTCGYSHMGALTKP 380
BLAST of mRNA_E-siliculosus-1a_F_contig1088.599.1 vs. uniprot
Match: W7UC67_9STRA (Regulator of chromosome condensation-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UC67_9STRA) HSP 1 Score: 238 bits (607), Expect = 1.500e-68 Identity = 168/392 (42.86%), Postives = 224/392 (57.14%), Query Frame = 1 Query: 193 VRVWGHGTKGQLG---IESEKLPNKET-LMGRLGREKATSTPTPLPGFEASGARTVSCGSEFTALVTTEGKLLTVGTNSKKGLLGLGIADGRNRHKMTEVPALKGVDVVSVACGEQHSVAVDSEGVAYSWGSGGSRWDGAGALGLGNLEDENFLVSSPTEITTLSGVGAKVAKVSAGGSHTAFLTTDGEVWTCGRGEYGLCGNGGTEDQLTPAPLEAFEEHI-IVDVQAGHAFALALTSEGEVLGWGRNDQGQLGLGGGLTMDVYAAEVLPRTIDALVDEKVVSIGAGYNHASAVTESGKLYMWGMKRSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-TIGSGGTYCLGNGTGGKSQTRNQPERVKPLSRVEVAHITCGASHTAAL 1350
V WG GT+GQLG I+ L L R R + G ++ G ++A VT +GKL T G S L G D + ++ +V AL+ V +V VACG+ H+ A+D +G ++WG GGS + G G LG G+ ++ P + +L G +V V+ G HT LT DGEV T G GEYG GNGG+ D P P+E F+E IV+V AGHAF L LT +G++ WGRN+QGQLGLGGG++MDVY+ E +P ++AL +KVV + AG++H++AVTE G+LYMWGMK LE XXXXXXXXXXXXXXXXXX T G G + CLG+GT +S T + L+ V + CG H A +
Sbjct: 51 VFAWGQGTEGQLGHSPIQKSALTGAYVELSPRELRLDTEQDQQKIEKHNPWGFVDLAAGLNYSAGVTEDGKLYTWGDGSNHKL---GHGDSKPVYRPRQVEALQDVKIVKVACGDFHTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQ----PRPKVVRSLVDYGCRVGSVACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHRVPEPVELFDEKTNIVEVAAGHAFNLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAVTEEGELYMWGMKIHLEPQVFRVGEGXXXXXXXXXXXXXXXXXXDAHQLFTFGKGSSLCLGHGT--RSYTPHPKLVADGLAGRGVVKVACGHRHMAVI 433
BLAST of mRNA_E-siliculosus-1a_F_contig1088.599.1 vs. uniprot
Match: A0A7S2AQB8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AQB8_9STRA) HSP 1 Score: 235 bits (600), Expect = 8.720e-68 Identity = 157/400 (39.25%), Postives = 205/400 (51.25%), Query Frame = 1 Query: 187 FGVRVWGHGTKGQLGIESEKLPNKETLMGRLGREKATSTPTPLPGFEASGARTVSCGSEFTALVTTEGKLLTVGTNSKKGLLGLGIADGRNRHKMTEVPALKGVDVVSVACGEQHSVAVDSEGVAYSWGSGGSRW-DGAGALGLGNLEDENFLVSSPTEITTLSGVGAKVAKVSAGGSHTAFLTTDGEVWTCGRGEYGLCGNGGTEDQLTPAPLEAFEEHIIVDVQAGHAFALALTSEGEVLGWGRNDQGQLGLGGGLTMDVYAAEVLPRTIDALVDEKVVSIGAGYNHASAVTESGKLYMWGMKRSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------TIGSGGTYCLGNGTGGKSQTRNQPERVKPLSRVEVAHITCGASHTAALI 1353
+ V +WG G GQLG+ S +K ++ R +E + P PLP +SCG + T VT+EGK+ G N K G LGLG + EV A GV +VSV CGE HS AVD +G ++WG GG W G G LG GN EN L +P + +L G V V G HT+ LT DGEV +CG GEYG GNG T D PLE + + + +GHAF+LALT +G + WGRNDQGQLG+G L++DVY+ E P I+A + ++ I AG++HA+A+T G LYMWGMK LE T G GG+ CLG+G G + R QPE V+ +S VA + H AA +
Sbjct: 28 YSVYMWGSGDHGQLGLGSI---HKSGMIMRTYKELS---PRPLPSIGDCEIADMSCGLDHTLAVTSEGKVFAWG-NPKYGKLGLGAETSGDVLVPAEVDAFGGVPIVSVVCGENHSAAVDEKGRLWTWGYGGGSWLSGGGMLGHGN---ENQL-DTPKLVESLVEEGVTVKTVCCGELHTSILTDDGEVMSCGAGEYGRLGNGNTYDVNIFEPLEYIADEEVTKLVSGHAFSLALTKDGVIYCWGRNDQGQLGMGATLSLDVYSMEADPNLIEAFHNLEIKEIAAGHSHAAALTSDGVLYMWGMKNYLEPQVFKVMKNDGSDGSEPEEATIRSLACGMNFTCVLSDEGDLFTFGKGGSNCLGHGDG---KYRAQPELVRDIS--NVAFVRSSHRHIAAFV 411
BLAST of mRNA_E-siliculosus-1a_F_contig1088.599.1 vs. uniprot
Match: A0A0P1AVQ2_PLAHL (FOG: RCC1 domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVQ2_PLAHL) HSP 1 Score: 231 bits (588), Expect = 6.990e-66 Identity = 167/393 (42.49%), Postives = 211/393 (53.69%), Query Frame = 1 Query: 193 VRVWGHGTKGQLG----IESEKLPNKETLMGRLGREKATSTPTPLPGFEASGARTVSCGSEFTALVTTEGKLLTVGTNSKKGLLGLGIADGRNRHKMTEVPALKGVDVVSVACGEQHSVAVDSEGVAYSWGSGGSRWDGAGALGLGNLEDENFLVSSPTEITTLSGVGAKVAKVSAGGSHTAFLTTDGEVWTCGRGEYGLCGNGGTEDQLTPAPLEAFEEHIIVDVQAGHAFALALTSEGEVLGWGRNDQGQLGLGGGLTMDVYAAEVLPRTIDALVDEKVVSIGAGYNHASAVTESGKLYMWGMKRSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGSGGTYCLGNGTGGKSQTRNQPERVKPLSRVEVAHITCGASHTAALIRP 1359
V WG+GT GQLG I+S E L TP + E V G+ +A + GKL G+N + G LGLG EV AL+GV +V V+CG+ + AVD +G YSWG GGS GAG LG +DE P +TTL G +A V G HT LT DGE+W G GEYG GNG ++ P P+E F E IV + AG F+ ALT +GE+ WG N QLG+GGGL MDVY E +P I+A V I AGY+HA+AVT G+LYMWG K +E XXXXXXXXXXXXXXXXXX T G G + CLG+G + + QP ++ L+ V++ ++CG H A+ RP
Sbjct: 41 VYTWGNGTLGQLGHGPVIKSGMRNAYEEL-----------TPKLVEALEGKAITFVDFGASHSAAIDETGKLYVWGSN-EYGKLGLG-ESSEIEVLPREVEALRGVKIVDVSCGDYFTAAVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPL----PRLLTTLVDQGVPMATVECGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSEDNIVSIAAGRDFSFALTDKGELYSWGGNSHNQLGIGGGLAMDVYNIESIPVLIEAFDGVTVKQIAAGYDHAAAVTADGRLYMWGAKIWIEPHEMTAVNDHNIVXXXXXXXXXXXXXXXXXXFTFGKGSSNCLGHGD---RKNQLQPVHIQALAGVQITSVSCGDYHMGAIARP 413
BLAST of mRNA_E-siliculosus-1a_F_contig1088.599.1 vs. uniprot
Match: G5AFL6_PHYSP (Uncharacterized protein (Fragment) n=17 Tax=Phytophthora TaxID=4783 RepID=G5AFL6_PHYSP) HSP 1 Score: 231 bits (588), Expect = 7.570e-66 Identity = 159/390 (40.77%), Postives = 211/390 (54.10%), Query Frame = 1 Query: 193 VRVWGHGTKGQLGIESEKLPNKETLMGRLGREKATSTPTPLPGFEASGARTVSCGSEFTALVTTEGKLLTVGTNSKKGLLGLGIADGRNRHKMT-EVPALKGVDVVSVACGEQHSVAVDSEGVAYSWGSGGSRWDGAGALGLGNLEDENFLVSSPTEITTLSGVGAKVAKVSAGGSHTAFLTTDGEVWTCGRGEYGLCGNGGTEDQLTPAPLEAFEEHIIVDVQAGHAFALALTSEGEVLGWGRNDQGQLGLGGGLTMDVYAAEVLPRTIDALVDEKVVSIGAGYNHASAVTESGKLYMWGMKRSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGSGGTYCLGNGTGGKSQTRNQPERVKPLSRVEVAHITCGASHTAALIRP 1359
V WG+GT GQLG + + + TP L FE V G+ +A + +GKL G+N L G+ + + EV ALKGV +V V+CG+ + AVD++G YSWG GGS GAG LG +DE +P +TTL G + V G HT L+ DGE+W G GEYG GNG ++ P P+E F + +V + AG F+ ALT GE+ WG N Q QLG+GGGL MDVY E +P ++A V I AGY+HA+AVT+ G+LYMWG K +E XXXXXXXXXXXXXXXXXX T G G + CLG+G + + QP +++ L+ V + I+CG H A+ P
Sbjct: 44 VYTWGNGTLGQLG-------HGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSAAIDEDGKLYVWGSNEYSKL---GLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWGWGGSTMKGAGGLGHAGGKDE----PTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWGSKIWIEPHEMTAVNEYKMVXXXXXXXXXXXXXXXXXXFTFGKGSSNCLGHGD---RKNQLQPVQIEALADVNITSISCGDYHMGAIATP 416
BLAST of mRNA_E-siliculosus-1a_F_contig1088.599.1 vs. uniprot
Match: A0A484EEU4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEU4_BRELC) HSP 1 Score: 229 bits (585), Expect = 1.630e-65 Identity = 159/390 (40.77%), Postives = 209/390 (53.59%), Query Frame = 1 Query: 193 VRVWGHGTKGQLGIESEKLPNKETLMGRLGREKATSTPTPLPGFEASGARTVSCGSEFTALVTTEGKLLTVGTNSKKGLLGLGIADGRNRHKMT-EVPALKGVDVVSVACGEQHSVAVDSEGVAYSWGSGGSRWDGAGALGLGNLEDENFLVSSPTEITTLSGVGAKVAKVSAGGSHTAFLTTDGEVWTCGRGEYGLCGNGGTEDQLTPAPLEAFEEHIIVDVQAGHAFALALTSEGEVLGWGRNDQGQLGLGGGLTMDVYAAEVLPRTIDALVDEKVVSIGAGYNHASAVTESGKLYMWGMKRSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGSGGTYCLGNGTGGKSQTRNQPERVKPLSRVEVAHITCGASHTAALIRP 1359
V WG+GT GQLG S L + TP + E V G+ +A + +GKL G+N L G+ + + EV ALKG+ +V V+CG+ + AVD +G YSWG GGS GAG LG DE +P + TL G +A V G HT LT DGE+W G GEYG GNG ++ P P+E F + IV + AG F+ ALT +GE+ WG N QLG+GGGL MDVY E +P +DA V I AGY+HA+AVTE G+LYMWG K +E XXXXXXXXXXXXXXXXXXX G G CLG+G + + QP++++ L+ +++ ++CG H A+ P
Sbjct: 35 VYTWGNGTLGQLGHGS-------VLKSGIRNTYEELTPKLVEALEGKAITRVEFGASHSAAIDEDGKLYMWGSNEYSKL---GLGESSELESLPREVEALKGIRIVDVSCGDYFTAAVDEDGKMYSWGWGGSTMKGAGGLGHAGGRDE----PTPRLLATLVDQGVPIATVECGEFHTVALTRDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFANNNIVSIAAGRDFSFALTDKGELYSWGGNSHNQLGIGGGLAMDVYNIESIPVLVDAFYGLTVKQIAAGYDHAAAVTEDGRLYMWGAKIWIEPHEMTAVSEHKMVXXXXXXXXXXXXXXXXXXXXFGKGSCICLGHGD---RKNQLQPKQIEALTDIQITSVSCGDYHMGAIATP 407
BLAST of mRNA_E-siliculosus-1a_F_contig1088.599.1 vs. uniprot
Match: A0A3F2S3F7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3F7_9STRA) HSP 1 Score: 228 bits (580), Expect = 4.320e-65 Identity = 159/388 (40.98%), Postives = 216/388 (55.67%), Query Frame = 1 Query: 199 VWGHGTKGQLGIESEKLPNKETLMGRLGREKATSTPTPLPGFEASGARTVSCGSEFTALVTTEGKLLTVGTNSKKGLLGLGIADGRNRHKMT-EVPALKGVDVVSVACGEQHSVAVDSEGVAYSWGSGGSRWDGAGALGLGNLEDENFLVSSPTEITTLSGVGAKVAKVSAGGSHTAFLTTDGEVWTCGRGEYGLCGNGGTEDQLTPAPLEAFEEHIIVDVQAGHAFALALTSEGEVLGWGRNDQGQLGLGGGLTMDVYAAEVLPRTIDALVDEKVVSIGAGYNHASAVTESGKLYMWGMKRSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGSGGTYCLGNGTGGKSQTRNQPERVKPLSRVEVAHITCGASHTAALIRP 1359
WG+GT GQLG + + + TP L FE + G+ +A + +GKL G+N L G+ + ++ EV ALKG+ +V V+CG+ + AVD+EG YSWG GGS GAG LG +DE +P + TL G ++ V G HT LT DGE+W G GEYG GNG ++ P P+E F + +V + AG F+ ALT +GE+ WG N Q QLG+GGGL MDVY E +P ++A +V I AGY+HA+AVTE G+LYMWG K +E XXXXXXXXXXXXXXXXXXXXXXT G G + CLG+ + + QP +++ L+ + + ++CG H A+ P
Sbjct: 11 TWGNGTLGQLG-------HGPVVKSGIRNAYEELTPKLLEAFEGKSITHLEFGASHSAAIDDQGKLFVWGSNEYSKL---GLGESVEIEELPKEVEALKGIKIVDVSCGDYFTAAVDAEGKMYSWGWGGSTMKGAGGLGHAGGKDE----PTPRLLKTLVDQGVPISTVECGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGMQVKKIAAGYDHAAAVTEDGRLYMWGAKIWIEPHEMTAVNEHXXXXXXXXXXXXXXXXXXXXXXTFGKGSSNCLGHDD---RKNQLQPMQIQALAGINITSVSCGDYHMGAIATP 381
BLAST of mRNA_E-siliculosus-1a_F_contig1088.599.1 vs. uniprot
Match: F0Y0R5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0R5_AURAN) HSP 1 Score: 226 bits (576), Expect = 2.120e-64 Identity = 159/392 (40.56%), Postives = 198/392 (50.51%), Query Frame = 1 Query: 199 VWGHGTKGQLGIESEKLPNKETLMGRLGREKATSTPTPLPGFEASGARTVSCGSEFTALVTTEGKLLTVGTNSKKGLLGLGIADGRNRHKMTEVPALKGVDVVSVACGEQHSVAVDSEGVAYSWGSGGSRWDGAGALGLGNLEDENFLVSSPTEITTLSGVGAKVAKVSAGGSHTAFLTTDGEVWTCGRGEYGLCGNGGTEDQLTPAPLEAFEEHIIVDVQAGHAFALALTSEGEVLGWGRNDQGQLGLGGGLTMDVYAAEVLPRTIDALVDEK---VVSIGAGYNHASAVTESGKLYMWGMKRSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----TIGSGGTYCLGNGTGGKSQTRNQPERVKPLSRVEVAHITCGASHTAAL 1350
WG GT+GQLG L G L ++ A P L GF R V+CG+ T V +G + + G S G G G D + V AL GVDVV+VACGE HS+A+DS+G YSWG GGS G G LG G D + L GA VA + AG H+ FLT DGEVWTCG GE+G GNGG+ D L P P+ A ++ +V ++AG AF + S G V WGRNDQGQLGLGGGL MDVYA E LPR ID L D V + AG++HA+ VT SG L WG K +LE + G+G + CLG+G Q P++V L +A ++CG H A L
Sbjct: 31 TWGEGTEGQLGH------TPFALSGVL-QQYAELAPRQLEGFVL---RDVACGTNHTLAVDGDGAVWSWG-KSDFGKCGHG--DDADCKAPARVAALAGVDVVAVACGESHSLALDSDGRVYSWGWGGSWLSGGGQLGSG---DRGHRYAPAPVAGALE--GACVASLGAGEGHSVFLTDDGEVWTCGAGEHGRNGNGGSGDVLAPEPVAALDDVDVVQLEAGSAFTICRDSTGVVRVWGRNDQGQLGLGGGLAMDVYALEDLPRPID-LPDGSPLTAVHVAAGHSHAAVVTPSGALLQWGAKNALEPAAHVFECDGAGGAPEPVAVHCGGAYTLAETADGDLYSFGAGSSKCLGHGD---KQRHPHPKKVAALDGFRLAKLSCGYRHCAVL 400 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1088.599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1088.599.1 >prot_E-siliculosus-1a_F_contig1088.599.1 ID=prot_E-siliculosus-1a_F_contig1088.599.1|Name=mRNA_E-siliculosus-1a_F_contig1088.599.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=448bp MAPMMTSLRCVAQRPAQGCSLLRRKWALLSRGLSSAGTGGDDSGGGGDGAback to top mRNA from alignment at E-siliculosus-1a_F_contig1088:10660..19983- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1088.599.1 ID=mRNA_E-siliculosus-1a_F_contig1088.599.1|Name=mRNA_E-siliculosus-1a_F_contig1088.599.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9324bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1088:10660..19983- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1088:10660..19983- >mRNA_E-siliculosus-1a_F_contig1088.599.1 ID=mRNA_E-siliculosus-1a_F_contig1088.599.1|Name=mRNA_E-siliculosus-1a_F_contig1088.599.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2688bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1088:10660..19983- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |