mRNA_E-siliculosus-1a_F_contig1084.584.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1084.584.1 vs. uniprot
Match: A0A6H5L7B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE) HSP 1 Score: 834 bits (2154), Expect = 1.070e-297 Identity = 404/427 (94.61%), Postives = 414/427 (96.96%), Query Frame = 3 Query: 339 MWASVRRMFGATMVSMVTAGTGLHMESVTTDGGVIGVRHGVVVQQDRGCPHAISPDEADIRRSARGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRDTNRAPPQYINGSLPTGFEGLQGRLDVCPHERLIDGTHANHIRGLHPHLQKCMRNVKMRGCEAAYLKESLGGEDSCPSPQRQLAEHEEESAQVVAGTTSPLERRGAGSLVVHVRSGDVFKPGTIYHQYGQPPLLYYLAVVASKPWNKMSFITSGEDDLLNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGNTKLNHFVNATMICLQRPEVEVYGIEWRTTSEAYTVYDSWDPSSNLLEMVVSDSVKGMRRCC 1619
MWASVRRM GATMVSM+TAGTGLHMESVT +GGVI VRHGVVVQ DRGCP AISPDEADIRRS RGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQR TNRAPPQYINGSLPT FEGLQGRLDVCPHERLIDGTHANHIRGLHPHLQKCMRNVKMRGCEAAYLKESLGGE +CPSPQRQLAE E+ESAQ+VAGTTSPLERRGAGSLVVHVRSGD+FKPGTIYHQYGQPPLLYYLAV+ASKPWNKMSF+TSGEDDLLNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVG+T LNHF NATMICLQR EVEVYGIEWRTTSEAYTVYDSWDPSSNLLEMVVSDSVKGM+RCC
Sbjct: 1 MWASVRRMVGATMVSMLTAGTGLHMESVTANGGVIDVRHGVVVQ-DRGCPQAISPDEADIRRSTRGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRHTNRAPPQYINGSLPTDFEGLQGRLDVCPHERLIDGTHANHIRGLHPHLQKCMRNVKMRGCEAAYLKESLGGEHACPSPQRQLAEREDESAQLVAGTTSPLERRGAGSLVVHVRSGDIFKPGTIYHQYGQPPLLYYLAVIASKPWNKMSFVTSGEDDLLNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGDTTLNHFANATMICLQRSEVEVYGIEWRTTSEAYTVYDSWDPSSNLLEMVVSDSVKGMQRCC 426
BLAST of mRNA_E-siliculosus-1a_F_contig1084.584.1 vs. uniprot
Match: A0A6H5JNM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM4_9PHAE) HSP 1 Score: 531 bits (1368), Expect = 1.070e-178 Identity = 262/398 (65.83%), Postives = 305/398 (76.63%), Query Frame = 3 Query: 432 GGVIGVRHGVVVQQDRGCPHAISPDEADIRRSARGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRDTNRAPPQYINGSLPTGFEGLQGRLDVCPHERLIDGTHANHIRGLHPHLQKCMRNVKMRGCEAAYLKESLGGEDSCPSPQRQLAEHEEESAQVVAGTTS--PLERRGAGSLVVHVRSGDVFKPGTIYHQYGQPPLLYYLAVVASKPWNKMSFITSGEDDLLNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGNTKLNHFVNATMICLQRPEVEVYGIEWRTTSEAYTVYDSWDPSSNLLEMVVSDSVKGMRRCC 1619
GG IG+R G VVQ+ GCP AIS DEA R S WPGGVL ++S+E +GRSGNHYMAIST+FS+AFCC VKVLELPD D+R PTE G FKSS +LFSFS T+ + S TG E LQGR+ VCP +R++DGTHANHI GL LQ+C+R+V MRGCEAAYL++ +G E SCP + E + VV GTT P E +G G LVVH+RS D+FKP T YHQYGQPPL Y+LAV+ASK W+ +S +TSG D LNP Y VI +N QG LGTNVEMHKDR WEDLQAMLCADSLALSHST +NLLLAHSRAKRFFLPWGCEPQ KLN FVNA+MICLQRPEV YGI+WRTTS+AYTVYDSWDP+SN++EMVVSD+VKG++RCC
Sbjct: 38 GGAIGIREGFVVQEV-GCPQAISHDEALARTSDPSWPGGVLNVTSLETVGRSGNHYMAISTMFSLAFCCGVKVLELPDTDYRFPTEEGGEFKSSKHLFSFSSHGTDGVEAERQTWSQLTGLEDLQGRVGVCPKKRIVDGTHANHITGLGKDLQRCIRHVHMRGCEAAYLQQVIGDESSCPDSPPPVGTDGEPTGLVVPGTTGLLPSETKGDGHLVVHIRSQDIFKPDTRYHQYGQPPLGYFLAVIASKKWDYLSVLTSGPDKQLNPTYSVIAELNRQGFLGTNVEMHKDRSFWEDLQAMLCADSLALSHSTLSNLLLAHSRAKRFFLPWGCEPQPWTLKLNRFVNASMICLQRPEV--YGIDWRTTSDAYTVYDSWDPNSNMMEMVVSDAVKGVQRCC 432
BLAST of mRNA_E-siliculosus-1a_F_contig1084.584.1 vs. uniprot
Match: D7FHC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHC1_ECTSI) HSP 1 Score: 530 bits (1364), Expect = 3.450e-176 Identity = 266/448 (59.38%), Postives = 323/448 (72.10%), Query Frame = 3 Query: 297 FVGRGWRASDTPVKMWASVRRMFGATMVSMVTAGT-----GLHMESVTTDGGVIGVRHGVVVQQDRGCPHAISPDEADIRRSARGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRDTNRAPPQYINGSLPTGFEGLQGRLDVCPHERLIDGTHANHIRGLHPHLQKCMRNVKMRGCEAAYLKESLGGEDSCP-SPQRQLAEHEEESAQVVAGTTS-PLERRGAGSLVVHVRSGDVFKPGTIYHQYGQPPLLYYLAVVASKPWNKMSFITSGEDDLLNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGNTKLNHFVNATMICLQRPEVEVYGIEWRTTSEAYTVYDSWDPSSNLLEMVVSDSVKGMRRCC 1619
F GRG + ++M A + R+ AT+ ++ G+ GL GG IG+R G VVQ+ GCP AIS DEA R S WPGGVL ++S+E +GRSGNHYMAIS +FS+A+CC VKVL+LPD D+R PTE G FKSS +LF+FS T+ + S TG E LQGR+ +CP ER++DGTHANHI GL LQ C+R+V MRGCEAAYL++ +G E SCP SP + E + VV GT P ER+G G LVVH+RS D+F P T +HQYGQPPL Y+LAV+ASK W+ +S +TSG D LNP Y VI +N QG LGTNV MHKDR W DLQ MLCAD+LALSHST +NLLLAHSRAKRFFLPWGCEPQ KLN FVNA+MICLQRPEV+VYGI+WRTT +AYTVYDSWDP+SN++EMVVSD+VKG++RCC
Sbjct: 113 FCGRGGGGNVAGMRMSALIWRLLRATLPPILAVGSSAFAVGLDERGDEAGGGAIGMREGFVVQEV-GCPQAISHDEALARTSDHSWPGGVLNVTSLETVGRSGNHYMAISAMFSLAYCCGVKVLQLPDTDYRFPTEEGGEFKSSKHLFTFSSNGTDGVEAERQTWSQLTGLEDLQGRVGICPKERIVDGTHANHITGLGKDLQTCIRHVHMRGCEAAYLQQVIGDERSCPDSPPPPVETDGEPTELVVPGTAGLPSERKGDGHLVVHIRSQDIFSPDTRFHQYGQPPLGYFLAVIASKKWDYLSVLTSGPDKQLNPTYSVIAELNRQGYLGTNVGMHKDRSFWVDLQTMLCADNLALSHSTLSNLLLAHSRAKRFFLPWGCEPQPWTLKLNRFVNASMICLQRPEVQVYGIDWRTTKDAYTVYDSWDPNSNMMEMVVSDAVKGVQRCC 559
BLAST of mRNA_E-siliculosus-1a_F_contig1084.584.1 vs. uniprot
Match: D7FSJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ7_ECTSI) HSP 1 Score: 401 bits (1031), Expect = 1.990e-129 Identity = 219/441 (49.66%), Postives = 267/441 (60.54%), Query Frame = 3 Query: 315 RASDTPVKMWASVRRMFGATMVSMVTAGTGLHMESVTTDGGVIGVRHGVVVQQDRGCPHAISPDEADIRRSARGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRDTNRAPPQYINGSLPTGFEGLQGRLDVCPHERLIDGTHANHIRGLHPHLQKCMRNVKMRGCEAAYLKESLGGEDSCPSPQRQLAEHEEESAQVVAGTTSPLERRGAGSLVVHVRSGDVFKPGTIYH--QYGQPPLLYYLAVVASKPWNKMSFITSGEDD-LLNPAYRVIEGINSQGLLGTN---VEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGNTKLNHFVNATMICLQRPEVEVYGIEWRTTSEAYTVYDSWDPSSNLLEMVVSDSVKGMRRCC 1619
+A+ PV+MWA++ ++ G TM+ + T GTGL M S D GVI VR GVVVQ D+GCPHAISPDEADIR+S WPGGVLTL+S+ ++ H LQ CM NVKMRGCEA Y + S GGE+ C +P+ +L EEE +VAG+TSPLE + A SLV H RSGDVFKP +H YGQPPLLY LAV+ASK W+ ++FIT+GE + LLNP +RVIE + SQG+LGTN VE +K R LWEDLQAMLCAD+L+++HST TNLLLAHSRAK FFLPWGCEPQ+G+ + FV+A+MICLQRPEVEVYGIEWRTTS AYTVY+ WDPS N LEM+VSD +KG++ CC
Sbjct: 12 QATLAPVRMWANIWQILGVTMIPIFTVGTGLSMASRAEDAGVIAVRDGVVVQ-DKGCPHAISPDEADIRKSTPSWPGGVLTLTSLYQVDN-------------------------------------------------------------------------------------------------HEDLQACMNNVKMRGCEAVYFQGSFGGEEYCSTPRHRLPADEEEPGLLVAGSTSPLETKRARSLVFHFRSGDVFKPRKDFHFQTYGQPPLLYVLAVIASKKWSNLTFITNGEHERLLNPTFRVIEELISQGILGTNGTIVETYKKRSLWEDLQAMLCADALSVAHSTLTNLLLAHSRAKMFFLPWGCEPQIGDMMIPRFVSASMICLQRPEVEVYGIEWRTTSNAYTVYNKWDPSVNQLEMIVSDDLKGVQHCC 354
BLAST of mRNA_E-siliculosus-1a_F_contig1084.584.1 vs. uniprot
Match: A0A6H5L0Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z0_9PHAE) HSP 1 Score: 281 bits (719), Expect = 1.260e-82 Identity = 165/406 (40.64%), Postives = 236/406 (58.13%), Query Frame = 3 Query: 450 RHGVVVQQDRGCPHAISPDEADIRRSARGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRDTNRAPPQYINGSLPTGFEGLQGRLDVCPHERLIDGTHANHI--RGLHPHLQKCMRNVKMRGCEAAYLKESLGGEDS-CPSPQRQLAEHEEESAQVVAGTTSPL--ERRGAGS--------LVVHVRSGDVFKPG-TIYHQYGQPPLLYYLAVVASKPWNKMSFITSGEDDL-LNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGNTKLNHFVNATMICLQRPEVEVYGIEWRTTSEAYTVYDSW-DPSSNLLEMVVSDSVKGMRRCC 1619
R G+V Q D CP AIS +EA + PGG+L++ S++ IGRSGNHY ++ +FSM+FCCQ KV+ +P+ D LPTE+G+ + N +SFS D G + T E +CP + + G G+H L +CM V+M GC A +L + +G +D+ C R E +EE ++ T++ ++R AGS LVVH+RSGD+F P + YGQPPL +YL V+ S+PW+ +S +T+ NP + V++ ++ QGLLG + DR L+ DL+ MLCA+++ L+ S+ T LL+ HSRAKRFFLP C G FV+ ICL RP+VEVYGIEW+TT Y+VYD W + + LEM+ SD VK ++RCC
Sbjct: 33 RGGLVFQSDA-CPQAISKEEAAALEADESLPGGILSVGSLDAIGRSGNHYEVVTRVFSMSFCCQYKVVRMPEQDTVLPTENGDTLELRHNTYSFSSADAALRTEHLGYGDIATDPE-------ICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFC----RWKDEGKEERRSLLRATSAVEGEDKRHAGSSPQGKGQSLVVHMRSGDIFSPELSDIPWYGQPPLQFYLKVIGSRPWSNISVLTNARIQREFNPTFGVLQELDKQGLLGAPANFYADRDLYTDLRDMLCAENVVLAKSSITRLLVRHSRAKRFFLPTSCAR--GGP---FFVDR--ICLYRPDVEVYGIEWKTTLNEYSVYDEWINTDAQRLEMITSDEVKSIQRCC 419
BLAST of mRNA_E-siliculosus-1a_F_contig1084.584.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI) HSP 1 Score: 244 bits (624), Expect = 1.250e-68 Identity = 149/414 (35.99%), Postives = 213/414 (51.45%), Query Frame = 3 Query: 420 VTTDGGVIGVRHGVVVQQDRGCPHAISPDEADIRRSARGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLP-TESGERFKSSTNLFSFSQRDTNRAPPQYINGSLPTGFEGLQGRLDVCPHERLIDGTHANHIRGLHPHLQKCMRNVKMRGCEAAYLKESLGGEDSCPSPQRQLAEHEEESAQVVAGTTSPLERRGAGSLVVHVRSGDVFKP---GTIYHQYGQPPLLYYLAVVASKPWNKMSFITSG-EDDLLNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGC---------EPQVGNTKLNHFVNATMICLQRPEVEVYGIEWRTTSEAYTVYDSW-DPSSNLLEMVVSDSVKGMRRC 1616
V GG V G + Q GCP A+S +A+ +TL S GRSGNH++ IS+ +M FCC+ ++L LP++D +P + G FK+ F FS R P + GFE L +VC + +A +H L +CM V +RGCE AYL + + E CP + P +R+GAGSLVVH+RSGD+F P G ++GQPPL YYL V+ K W+ ++F+T+ +NP + ++E + G LG NV + K+R L ED++ MLCAD+LA S S+ + L AHSRA FF+P C P V T F N T++ L++P+ EVYG W S Y+VY +W D LLEM ++G+++C
Sbjct: 68 VRETGGETHVMSGANLFQSAGCPQALSRSQAEAALDGGNSTSNTITLLSFGS-GRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAMPGDDEGGGFKAGERWFDFS-----RVTPPW------PGFEQLGDNPEVCRPQMEDGADNAFGYEHIHSRLLRCMNRVYLRGCEKAYLGKMVDLEGFCPKQE-------------------PGKRKGAGSLVVHIRSGDIFNPNEEGRRRTEFGQPPLQYYLHVLGEKDWDNVTFLTAAWNQKAINPTFSILEVMAKAGTLGDNVRLLKNRSLLEDVREMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMRRPPVKAT----FDNTTLLLLEKPDAEVYGTAWPGNSPKYSVYQAWHDTPEQLLEMATFGGIEGVQKC 446
BLAST of mRNA_E-siliculosus-1a_F_contig1084.584.1 vs. uniprot
Match: D7FRV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV8_ECTSI) HSP 1 Score: 207 bits (526), Expect = 2.790e-56 Identity = 125/346 (36.13%), Postives = 181/346 (52.31%), Query Frame = 3 Query: 624 MAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRDTNRAPPQYINGSLP-TGFEGLQGRLDVCPHERLIDGTHANHIRGLHPHLQKCMRNVKMRGCEAAYLKESLGGEDSCPSPQRQLAEHEEESAQVVAGTTSPLERRGAGSLVVHVRSGDVFKPGTIYHQ---YGQPPLLYYLAVVASKPWNKMSFITSG-EDDLLNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGNTKLNH---------FVNATMICLQRPEVEVYGIEWRTTSEAYTVYDSW-DPSSNLLEMVVSDSVKGMRRC 1616
M FCC+ ++L LP D +LP E + F S+ F FS N ++P ++ + +VC E G A +HP L +CM V +RGCE AYL + + CP + P +R+GAGSLV H+RSGD+F P H+ +GQPPL YYL V+A+K W+ ++F+T+ ED LNP + +E + G+LG NV + +R L D++ MLCAD+LA S S+ + L AHSRA FF+P C GN F N T++ L++ E EV+G++WR Y+VY +W D LLEM +KG+++C
Sbjct: 1 MGFCCRSRLLTLPATDDKLPDEL-DNFTSARRWFDFS------------NVTVPWPEYQEMGDDQEVCRPETKDGGRKAFGYEDVHPKLLECMNRVYLRGCEKAYLGKLVDVGSFCPKQE-------------------PGKRKGAGSLVAHIRSGDIFNPDGEGHRRQGFGQPPLQYYLRVLAAKDWDNVTFLTAAWEDRALNPTFLTLEMMADAGVLGENVHLFNNRTLLTDMKEMLCADALATSRSSMSFLTFAHSRATTFFVPTPC----GNGGFRRMKDVPVKATFDNTTLLLLEKRESEVFGVDWRQNGSDYSVYKNWLDSPHQLLEMTTYKGIKGLQKC 310
BLAST of mRNA_E-siliculosus-1a_F_contig1084.584.1 vs. uniprot
Match: D8LSV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSV7_ECTSI) HSP 1 Score: 150 bits (378), Expect = 9.980e-38 Identity = 77/166 (46.39%), Postives = 108/166 (65.06%), Query Frame = 3 Query: 1128 QPPLLYYLAVVASKPWNKMSFITSGEDDL-LNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGNTKLNHFVNATMICLQRPEVEVYGIEWRTTSEAYTVYDSW-DPSSNLLEMVVSDSVKGMRRCC 1619
+PPL +YL V+ S+PW+ +S +T+ NP + V++ ++ QGLLG + DR L+ DL+ MLCA+++ L+ S+ T LL+ HSRAKRFFLP C G FV+ ICL RP+VEVYGIEW+TT Y+VYD W + + LEM+ SD VK ++RCC
Sbjct: 39 KPPLQFYLKVIGSRPWSNISVLTNARIQREFNPTFGVLQELDKQGLLGAPANFYPDRDLYTDLRDMLCAENVVLAKSSITRLLVRHSRAKRFFLPTSCAR--GGP---FFVDR--ICLYRPDVEVYGIEWKTTLNEYSVYDEWINTDAQRLEMITSDEVKSIQRCC 197
BLAST of mRNA_E-siliculosus-1a_F_contig1084.584.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI) HSP 1 Score: 153 bits (386), Expect = 1.530e-36 Identity = 109/370 (29.46%), Postives = 184/370 (49.73%), Query Frame = 3 Query: 543 GGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRDTNRAPPQYINGSLPTGFEGLQGRLDVCPHERLIDGTHANHIRGLH--------PHLQKCMRNV-KMRGCEAAY-LKESLGGEDSCPSPQRQLAEHEEESAQVVAGTTSPLERRGAGSLVVHVRSGDVFKPGTIYHQYGQPPLLYYLAVVASKPWNKMSFITSGED-DLLNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGNTKLNHFVNATMICLQRPEVEVYGIEWRTTSEAYTVYDSWDPS-SNLLEMVVSDSVKGMRRC 1616
G V+ ++ ++ GR+GN +MA+ ++ +CC+ K + LP D L + +F+ P++ + S +G+ L CP + + + A + GL PH++ CM ++ GCEAAY + + CP ++ + G +P GAG+LV+HVRSGD+F + ++ GQPPL +YL ++ +PW+++ +T+G++ D +NP + + + G L NV H +R + EDLQ+MLCADSL L+ S+ N L HS A R + PW C NH + + RP+ +VYG++ S +Y+VY W+ + EM+ + +RC
Sbjct: 80 GNVVKVTHLQ-FGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVL----------APGIFN-----EGTPGPRWFDFSSAPDVDGVD--LGRCPIDIIWENRGAMQMAGLDNPERNKYLPHIRDCMAKAPRLLGCEAAYYFPQDIA---VCPRKKKPF---------LALGDRNPPG--GAGNLVLHVRSGDIFFDRVVPYK-GQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRC---------NHDLRE--LARLRPKTKVYGLQL-DRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 404
BLAST of mRNA_E-siliculosus-1a_F_contig1084.584.1 vs. uniprot
Match: D7G2M2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2M2_ECTSI) HSP 1 Score: 136 bits (342), Expect = 4.890e-30 Identity = 133/498 (26.71%), Postives = 213/498 (42.77%), Query Frame = 3 Query: 249 AVLDSVSADHTA-G*VRFVGRGWRASDTPVKMWASVR-----RMFGATMVSMVTAGTGL-----HMESVTTDGGVIGVRHGVVVQQDRGCPHAISPDEADIRRSARGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRL-PTESGERFKSSTNLFSFSQRDTNRAPPQYINGSLPTGFEGLQGRLDVCPHERLIDGTHANHIRGLH--------PHLQKCMRNV-KMRGCEAAYLKESLGGEDSCPSPQRQLAEH-EEESAQVVAGTTSP-----------LERRGAGSLVVHVRSGDVF----KPGTIYHQYGQPPLLYYLAVVASKPWNKMSFITSGED---DLLNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADS-LALSHSTFTNLLLAHSRAKRFFLPWGCEPQVG-NTKLNHFVNATMICLQRPEVEVYGIEWRTTSEAYTVYDSWDPSSNLLEMVVSDSVKGMRRC 1616
A+LDS D A G + GR A W R R F A ++ V G+ + GG RH D CP+ + +R PG VLT++ R GR GN + A+ + +CC+ K++ LP D L P GE P++ + + EG CP + G A H+ GL P+L C+ V ++ GCEAAY G D C S + + E+ +G + P E R A +LV+HVRSGD+F PG YGQPPL YY+ + + W+++ +T+G +++NP +E + ++G L N+ HKDR + ED +M+C L + S+ + LL HS A R + P C + T+ + + + + V+VYG++ E Y++ SW+ +++ + +++ +V +C
Sbjct: 38 ALLDSPGDDGAADGNINVGGRTGIAGTDRTVGWRGPRLPRPARAFSALLLVYVVVALGILFIPTRWRDIHAYGGQDQRRH-FAFNPD--CPYILRTPGERLRMRDPAIPGNVLTINDF-RFGRLGNRFWALGVNLKLGYCCKSKLVSLPAKDDTLAPGIFGEGTPG----------------PRWYDFTNAPDVEGFDA--SSCPADITWGGREAFHLLGLDNPSHPYYSPNLSTCVETVPRLTGCEAAYFFPM--GVDVCLSDRTATGDVVHEQRGNGASGRSGPGVKKNLVGSEEEEGRPANTLVIHVRSGDIFVDPAAPG-----YGQPPLQYYVRAIKHQKWDRVDIVTNGRTKKMNVMNPVIPALEVMFAEGELTGNIYFHKDRTMEEDFLSMMCVGGGLVTARSSLSLLLAHHSSASRLYFPRPCAGSLEFYTRGSPDASLNDLDDELQAVKVYGVK-PPGMERYSLDVSWNNTADQVNEMLTFNVSSFEQC 505 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1084.584.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 15 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1084.584.1 >prot_E-siliculosus-1a_F_contig1084.584.1 ID=prot_E-siliculosus-1a_F_contig1084.584.1|Name=mRNA_E-siliculosus-1a_F_contig1084.584.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=428bp MWASVRRMFGATMVSMVTAGTGLHMESVTTDGGVIGVRHGVVVQQDRGCPback to top mRNA from alignment at E-siliculosus-1a_F_contig1084:25125..35876- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1084.584.1 ID=mRNA_E-siliculosus-1a_F_contig1084.584.1|Name=mRNA_E-siliculosus-1a_F_contig1084.584.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10752bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1084:25125..35876- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1084:25125..35876- >mRNA_E-siliculosus-1a_F_contig1084.584.1 ID=mRNA_E-siliculosus-1a_F_contig1084.584.1|Name=mRNA_E-siliculosus-1a_F_contig1084.584.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2568bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1084:25125..35876- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |