mRNA_E-siliculosus-1a_F_contig1081.568.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1081.568.1 vs. uniprot
Match: D8LLY2_ECTSI (30S ribosomal protein S1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLY2_ECTSI) HSP 1 Score: 1326 bits (3431), Expect = 0.000e+0 Identity = 722/750 (96.27%), Postives = 725/750 (96.67%), Query Frame = 1 Query: 73 MRTVRVNLPLAVMLGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRTRAAAQPRPAAATGRGMRIMSAAVDETETTEAAAEATLEXXXXXXXXXXXXXXXXXXXXXXXXXDAVSIALEDIVVGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDGEARKLVLSMRQKPRASSAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLAVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTDVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGDEGYGAEGGRRGRGGGXXXXGMDSAAFGREDFADTTQGGEGGGGADWQQFLNNYFDDKE 2322 MRTVRVNLPLAVMLGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRTRAAAQPRPAAATGRGMRIMSAAVDETETTEAAAEATLE XXXXX XXXXXX DAVSIALEDIVVGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDGEARKLVLSMRQKPR+SSAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVL VGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYT+VPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXX DRRG KKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGDEG+GAEGGRRGRGGGXXXX MDSAAFGREDFADTTQ ADWQQFLNNYFDDKE Sbjct: 1 MRTVRVNLPLAVMLGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRTRAAAQPRPAAATGRGMRIMSAAVDETETTEAAAEATLEEXXXXXPVXXXXXXPISPAMEDDD-DAVSIALEDIVVGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDGEARKLVLSMRQKPRSSSAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTNVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXXDRRGTKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGDEGFGAEGGRRGRGGGXXXXXMDSAAFGREDFADTTQXXXXXXXADWQQFLNNYFDDKE 749
BLAST of mRNA_E-siliculosus-1a_F_contig1081.568.1 vs. uniprot
Match: A0A836CHC1_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC1_9STRA) HSP 1 Score: 514 bits (1323), Expect = 1.730e-169 Identity = 327/773 (42.30%), Postives = 445/773 (57.57%), Query Frame = 1 Query: 73 MRTVRVNLPLAVMLGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRTRAAAQPRPAAATGRGMRIMSAAVDETETTEAAAEATLEXXXXXXXXXXXXXXXXXXXXXXXXXDAVSIALEDIVVGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDGEARKLVLSMRQKPRASSAEQ-GNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLAVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTDVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGE-RVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGN--IDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGDEGYGAEGGRRGRGGGXXXXGMDSAAFGREDFADTTQGGE-------------------GGGGADWQQFLNNYFDDKE 2322 MR V V L AV+LGL S AF + VV H+ N A+S TR+ +R+ + A + AAA TL L D+VVG++YEGV++NV++YGAFVDIG E NGLVHISQLAD FV+N + V EGD V V+VL++D +KLVL+MR PRA+ +Q ++ YA++LA DP + + VE++V YGAF L +GCSGF+HISQ+ P E V++VSDV+ VGQ V VR+R+VD+ L R+N+SLLP + AATKDVS LA +D FR GTVSAV DYG FV ++GVDGLLH+SK+ ++T + GQEV +RI+ V+ A NK+SL+M+ E D EEW+EG+VVS YGAFV L +DGMVHIS+L GE RVD+V + + +G V+VR++E P++RK+RL+MRE G A G RG + K V + + EEW+ G+V S T FGAFVA+ DGLLH+S++A V +D L GQE++VRVI+VD + R+GLS+R+ R+ A +D+SVL G D F+PG V S+V YG FV ++ I+GL+H+S+++ RV+ V DV G +VQVR+ +++ D VNLSM+P G+ DRS RRG G D AA +D +D GE GGG ADWQ++LN YF+ K+ Sbjct: 1 MRCVSVPLQTAVLLGLVSGSAAFAFAPN-AKVVVHQHRLNRAISNTRSRLS----------VRMSTVAPADLADNSAAASKTL--------------------------------LADLVVGQQYEGVVSNVLSYGAFVDIGAEANGLVHISQLADAFVSNPTEIVAEGDSVSVKVLSIDQAEKKLVLTMRTSPRAAHIQQEADLSPYAEILATDPGRMLPGTVESVVRYGAFVRLAEGCSGFLHISQLKPRAERVSNVSDVVTVGQEVQVRLRDVDQDLKRVNLSLLPLSGATS-----AAATKDVSPLASADRATFRAGTVSAVHDYGAFVAVDGVDGLLHISKIEEGVALTPAQLRERLSVGQEVSVRILSVDVAANKLSLTMIADKPEPDLSALAARSPEEWIEGSVVSTTTYGAFVHLGDGIDGMVHISEL---GEGRVDAVTDVLNVGDAVKVRVIEVVPAARKVRLSMREFGA--AEAAPRGAASGGARRGRGARGPKDVSAYAAMGAEEWVEGKVVSFTPFGAFVALPGGVDGLLHVSEMASGRVEAPQDVLSEGQEIKVRVIDVDTEAGRIGLSLRQARR-----APVSRDLSVLAGVDTTAFVPGTVTSVVSYGCFVALDDTPGIEGLLHVSQLSEDRVEEVGDVVAEGDKVQVRVVEVDLDAGKVNLSMLPVGSAKDRS-----------RNARRGT-------GEDGAA---DDASDPFGTGERRKSPRPRFNDYEDSALNVGGGEADWQKYLNQYFEKKD 694
BLAST of mRNA_E-siliculosus-1a_F_contig1081.568.1 vs. uniprot
Match: A0A835YL04_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL04_9STRA) HSP 1 Score: 423 bits (1087), Expect = 1.130e-133 Identity = 281/725 (38.76%), Postives = 397/725 (54.76%), Query Frame = 1 Query: 73 MRTVRVNLPLAVMLGLAGSSTAF--LQSVRPTNFVVPAHKYNAAVSRTRAAAQPRPAAATGRGMRIMSAAVDETETTEAAAEATLEXXXXXXXXXXXXXXXXXXXXXXXXXDAVSIALEDIVVGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDGEARKLVLSMRQKPR--ASSAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDG------------CSGFVHISQMSPTGEHVADVSDVLAVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTDVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREP-------------RQNSPRGARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIE--GNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGDEG 2154 MR RV+LP AV+LGL S F L S R + VPA +++AAVS +R + R M I S E E T L D+ +G Y+G++NNVV YG FVDIG VNGLVH SQL++ FV N + V +GD V VRV+ +D +AR+L LSMR R A + +V YA LA DP++F+ V+ ++ GAF L G GF+H SQ+ P E V D D L+ GQ V VRIREVD +L RI++SLLP +G S+ +A +DVS + G+DP EFR GTV ++ +YG+FV ++GVDGLLH S++ R ++ + + + GQ+V +R+ V+TA N++SLSM+PP D R+ +P + W++G V + +GAFV + VDG+VHISQL + +V + V +G VRVR++E DP R XXXXXX RRG+K V +++ PE W+ G VA++ FGAFV +D DGL+H SQI ED L GQ V+VRV+ D + RL LSM +P RQ S G+ +DVSVL G DPD F+ G V S++P+G FV ++ G + GL+H+SE++ GRV+ V +V G ++VR+ +++T ++LSM+ G+ DR+ G G +G Sbjct: 1 MRCPRVSLPSAVLLGLVLRSHGFVVLSSTRQ-HIHVPARQHSAAVSCSRCSRNRRAVL-----MYISSTEAVSLPVAEERPEKT--------------------------------KLSDLQLGVMYQGIVNNVVDYGVFVDIGASVNGLVHKSQLSNTFVTNPEKIVSQGDSVTVRVIGIDVDARRLSLSMRAGGRRMAHALSADDVAPYAAQLAADPARFIVGTVQLVLRSGAFVALAGGGEGGXXXXXXXXAVGFLHASQLRPRPERVEDARDALSAGQEVQVRIREVDVELRRISLSLLPLPEGGDGGSSGSSAQRDVSRIEGADPAEFRAGTVVSLTEYGVFVALDGVDGLLHYSQIEEGRQLSPAELRARFAVGQDVSVRVRRVDTAANRLSLSMVPPRAPPDLSRFAALPPDAWIDGAVAATTAFGAFVTIGDGVDGLVHISQLSDEDDFPSAVTDVVNVGDAVRVRVIEVDPERRXXXXXXXXXXXXXXX---XXXXXXXXXXRRGVK---DVSRYVGADPEAWVDGMVATVVPFGAFVTLDGGVDGLVHASQICGG--GGAEDALSAGQAVRVRVVGADAERGRLELSMLDPTEAAAXXXXTAGRRQRS--GSEAPRDVSVLAGADPDAFVTGTVTSVLPFGCFVALDDVGGLQGLLHVSELSEGRVEDVGEVVAEGDRLEVRVVEVDTSTGKISLSMLQPGSAKDRAHRGGGSDG 677
BLAST of mRNA_E-siliculosus-1a_F_contig1081.568.1 vs. uniprot
Match: A0A2N1PT36_9BACT (Uncharacterized protein n=1 Tax=Candidatus Wallbacteria bacterium HGW-Wallbacteria-1 TaxID=2013854 RepID=A0A2N1PT36_9BACT) HSP 1 Score: 213 bits (541), Expect = 1.420e-54 Identity = 155/478 (32.43%), Postives = 243/478 (50.84%), Query Frame = 1 Query: 433 VGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLA-DEFVANCDDHVKEGDMVRVRVLNVDGEARKLVLSMRQKPRASSAEQGNVQKYADMLAEDP----------SQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLAVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGS--DPTEFRKGTVSAVADYGLFVNIE-GVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTDVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMRE 1824 VG E EGV+ N+V YGAFV+I + GLVH S ++ V N D VK G+ VRVRVL +D + +K+ L M+Q L DP V K+ N+VSYGAF LE G G VH+S MS T + V +++ G+ VDVRI E+D +I+ + AT D + G D E G V+ + ++G+FV +E G++GL+HVS +S + I N G EV+++++++ + K+SL + + + T+ E GTV ++ N+GAFV L V+G+VHIS + E++D ++ +RV++LE + S +K+ L +++ D + + K E + + G V IT FGAFV ++D +GL+HISQ+++ HV VED + IG ++V++IE+ D +L LS+R+ Sbjct: 339 VGTEVEGVVRNIVNYGAFVEIEPGLEGLVHHSDMSWTRRVNNPKDFVKSGEEVRVRVLEIDLDQKKISLGMKQ------------------LTPDPWDDIKIRYKVDDVVKGKITNVVSYGAFVELEPGLEGLVHVSDMSWT-KRVKHPDEIVRAGEDVDVRILEIDVDKRKISFGI-------------KQATADPWSIIGKSYDIGEIYTGKVTNITNFGIFVELEEGIEGLVHVSDISWTQKIV--NPAGVCAIGDEVKVKVLDIKPGDKKISLGIKQVSADPWSSVETEFKVGETYTGTVKNLTNFGAFVELKDGVEGLVHISDMS-WTEKIDHPSQILKSSDKIRVKVLEINTSDKKISLGLKQ----------------LVLDPWAVFEEKYHEGMI-------VDGEVLRITSFGAFVRIEDGIEGLVHISQLSDKHVEKVEDVVAIGDRIRVKIIEIKDDERKLRLSLRD 758
BLAST of mRNA_E-siliculosus-1a_F_contig1081.568.1 vs. uniprot
Match: A0A2V9LYV5_9BACT (30S ribosomal protein S1 (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9LYV5_9BACT) HSP 1 Score: 198 bits (504), Expect = 2.400e-50 Identity = 157/573 (27.40%), Postives = 280/573 (48.87%), Query Frame = 1 Query: 418 LEDIVVGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDGEARKLVLSMRQKPRASSAEQGNVQKYADMLAEDP----------SQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLAVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIE-GVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTDVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIA-EDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSM 2100 LED G+ EGV+ N+ YGAF+D+G V+GL+HI+ ++ V + + GD ++V+V+ + E ++ L +Q L+EDP + V KV ++ YGAF LE G G +HIS+M+ + V S +++V ++VDV I ++D + RI++ L + P V ++ P G V V D+G+FV +E G+DGL+H++ MS R + + G ++++++++ N + ++SL +E+ P ++G VVS+ +YGAFV L+ ++G++HIS++ +RV V + + V V IL+ D +R++ L +++ N M+ +P I+G+V ++T FG FV V++ DGL+H+S ++ V + + + G EVQ ++ +D N +L L +++ + + +V + + G VV I +GAFV + I+GL H+SE+ VD + GQEV+++I +N + LS+ Sbjct: 163 LED---GKVMEGVVKNITDYGAFIDLGG-VDGLLHITDMSWGRVNHPSELFNVGDKIKVKVIKFNREDGRVSLGYKQ------------------LSEDPWLHADMRYPKNLRVQGKVVSLTDYGAFVELEPGIEGLIHISEMT-WNKRVKHPSKIVSVNEMVDVVILDIDTEARRISLGL----KQTEPNPWDVMESRYT-------PGTVITGKVRNVTDFGVFVEVEDGIDGLVHITDMSWGRVNHPSEL---FNVGDKIKVKVIKFNREDGRVSLGYKQLSEDPWLHADMRYPKNLRVQGKVVSLTDYGAFVELEPGIEGLIHISEM-TWNKRVKHPSKIVSVNEMVDVVILDIDTEARRISLGLKQT---------------EPNPWDVMES--------RYTPGTVITGKVRNVTDFGVFVEVEEGIDGLVHVSDMSWTKRVKHPSELFKKGDEVQAVILSIDAANQKLSLGIKQLEPDRWEDWFSRHNVG--------DVVRGNVVRITNFGAFVELADGIEGLCHVSELDEKHVDKPAEFLAAGQEVEMKIIKLNLQEKKIGLSL 666
BLAST of mRNA_E-siliculosus-1a_F_contig1081.568.1 vs. uniprot
Match: A0A1V5US35_9BACT (30S ribosomal protein S1 n=1 Tax=bacterium ADurb.Bin243 TaxID=1866936 RepID=A0A1V5US35_9BACT) HSP 1 Score: 194 bits (492), Expect = 1.820e-48 Identity = 144/553 (26.04%), Postives = 275/553 (49.73%), Query Frame = 1 Query: 436 GEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKE-GDMVRVRVLNVDGEARKLVLSMRQKPRASSAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLAVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTE--FRKGTVSAVADYGLFVNIE-GVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTDVPS----EEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIA-EDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDI 2067 G G + + YGAF+DIG ++GL+HI+ ++ V+N D V G + +VL +D + +K+ L ++Q + E G+ K ++ V+NI YG F LE G G +H+S +S +G +D + GQ + ++ +V+ ++ +I + + TKD E G + ++ +YG+FV +E G++G +H+S +S + I + + G +E+++++++ K++L + ++ +T V S E+ +EG V ++ +GAFV L+ ++G++HIS L +R++ ++ G V+V+I+E +P+ +K+ L+ + + K + + G++ FGAFV V++ +GLLH S +A S+ + L+ G+ ++V V+ +D DN ++ L +++ Q+ + K D E + G+V SI YGAF+ + I+GL+HIS++A RVD VE+V + GQ+V+V++ ++ Sbjct: 213 GSTVAGTVKSFTEYGAFIDIGG-IDGLLHITDMSYGHVSNPADVVSSIGSQITCKVLKLDRKTKKISLGLKQLSKNPWEEVGDKYKVGEIY--------ECTVKNIADYGVFATLEPGVDGLIHVSDLSWSGR--TRPNDFKS-GQKIKAKVIDVNLEIKKIKLGI-------------KQVTKDPWEKVTETYPENTITNGKIKSILNYGVFVELEDGIEGFIHISNISWTKKINHPS--ELLKVGDSIEVKVLKLDLETKKINLGI----KQTHVDPWTMVESKFKVEQIVEGKVTNVKKFGAFVELEEGIEGLIHISDLS-WTKRLNHANEMLKTGDPVKVKIIEINPAEKKIALSYKH-----------------------LTKDPWSDIETRFPIGATVEGKITHFASFGAFVEVEEGVEGLLHTSDLAWNKKYSDPSEVLKEGETIKVLVLNIDKDNRKMSLGVKQLAQDPLIAYKEKMDSG--------EMLDGKVKSIQEYGAFIEFDDGIEGLIHISQLADERVDKVENVVKAGQQVKVKVIEV 702
BLAST of mRNA_E-siliculosus-1a_F_contig1081.568.1 vs. uniprot
Match: A0A812SBN0_9DINO (RpsA protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SBN0_9DINO) HSP 1 Score: 185 bits (469), Expect = 2.250e-47 Identity = 121/297 (40.74%), Postives = 165/297 (55.56%), Query Frame = 1 Query: 1258 RYTDVPSEEWLEG-----TVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDD----TDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGN---IDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAG 2112 +Y +P E+ G TV S++++GAFV + + DG++HIS++ ER+D+VY+ V+ GQ V V I K LTM EG T +D G + + F +LSP+EW G V+ FGAFV V + DGL+H+SQI + V NV+D L GQEVQVRV VDVD R+ LSMR G R D+S DE++ G+V + P+GAFV + N DGLVHI+++ G V+SVED GQEVQVRI ++ DN ++LSM PAG Sbjct: 189 KYPPIPFEQLEVGQKYTATVRSVLDFGAFVDIGAESDGLLHISRMS--SERIDNVYDFVQEGQQVEVWI-SGKRDDGKFGLTM----VEGMT-----------DDAGGRRAPADLTPFQDLSPDEWQKGVVSRTAPFGAFVTVTLEGGASADGLVHVSQIKDGFVDNVDDELSAGQEVQVRVQSVDVDAGRMSLSMRSGXXXXXXGFREPADLSAFEAISSDEWLTGKVARLAPFGAFVTVTANDASADGLVHITQIRDGFVESVEDELSEGQEVQVRIESVDADNGKMSLSMKPAG 467
BLAST of mRNA_E-siliculosus-1a_F_contig1081.568.1 vs. uniprot
Match: A0A5C5YTC5_9BACT (30S ribosomal protein S1 n=2 Tax=Posidoniimonas TaxID=2795979 RepID=A0A5C5YTC5_9BACT) HSP 1 Score: 184 bits (467), Expect = 5.450e-46 Identity = 157/575 (27.30%), Postives = 279/575 (48.52%), Query Frame = 1 Query: 412 IALEDIVVGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDG------EARKLVLSMRQKPRASSAEQGNVQKY-ADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLAVGQVVDVRIR----EVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSTDR-SITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTDVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDH-VSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLS 2097 +A ED+ + + EG I V VD+G + G+V S+ ++ D + G VRV V +V+ E +VLS R+ + ++K+ A M + V+ VE + G + G + F+ SQ+ H +G+ +D I+ ++DE+ I +S + E A K L + + RKG V +AD+G FV++ G+DGLLH++ MS R S SE + E+E+ ++ ++ K++L + T P + GTVV++M+YGAFV+L+ ++G+VHIS++ R+ V I V V +L + +++ L M++ D K A+ P + ++G+V ++T++GAF+ +++ DGLLH+S ++ VS+ + ++ GQEV+ +VI VD D R+ L +++ ++ P + P + + G+V I +G FV +E ++GL+HISE+A +V++ EDVC +G E++V+I ++TD+ + LS Sbjct: 35 LAGEDVSINQIVEGKIVRVDAEYVIVDVGYKSEGMVPRSEWEEDDENPADPDPEIGGTVRVLVEDVEDVVGRHDERGMIVLSKRKAEK--------IEKWMAVMESVHEGDVVTGTVERKIKGGLLVNI--GVNVFLPASQVDIRRPH--------DIGEYIDKEIQCIVLKIDEQRRNIVVSRRSLIEQER-------AKKKAELLKELNVGDLRKGVVKNIADFGAFVDLGGIDGLLHITDMSWGRISHPSELVKI----DDELEVMVLHIDYEKEKIALGLKQKQPSPWDDVSTKYPVGSRVTGTVVNVMSYGAFVKLEDGIEGLVHISEMS-WTRRISHPSELVNIDDQVEVVVLGINEEKQEISLGMKQT-----------------QDNPWDKVAEKYP------PGQLVTGKVRNLTNYGAFIEIEEGIDGLLHVSDMSWTRKVSHPSEVVEKGQEVECQVISVDTDRRRIALGLKQM-EDDPWAT------DIPSRYQPGQLVQGKVTKITNFGVFVGLEDGLEGLLHISELADEKVENPEDVCNVGDEIEVKILRVDTDDRKIGLS 549
BLAST of mRNA_E-siliculosus-1a_F_contig1081.568.1 vs. uniprot
Match: A0A847LEK2_9BACT (Cytidylate kinase n=1 Tax=Candidatus Riflebacteria bacterium TaxID=2053586 RepID=A0A847LEK2_9BACT) HSP 1 Score: 187 bits (474), Expect = 1.060e-45 Identity = 138/473 (29.18%), Postives = 248/473 (52.43%), Query Frame = 1 Query: 436 GEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDGEARKLVLSMRQKPRASSAEQGNV-QKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLAVGQVVDVRIREVDEKLGRINMSL---LPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNI-EGVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEE--ADFGRYTDVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMR---EEGYEGATGGNMGXXXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMRE 1824 G+ +GV++ +V YGAF+D+G V GL+H + L+ +AN + V+ G + ++L +D E K+ L ++QK G V Q+Y + ++ KV+N++ +GAF LE+G G VHIS +S +V D++ G+V+ V ++E+D+ RI++S LP+ + + KG V+ + D+G FV I EG++GLLH+S M + I E+GQEVE++I+ +++ N ++SL + T + D + + + L G V ++++YGAFV+L+ ++G++HIS+ + D +++G V V + E D +K+ L++R ++ ++G +RR SV+Q G++ S+ + GA V + ++ G +HISQIA+ V + + ++ G V V+V+E+D N +L LS++E Sbjct: 447 GDTIKGVVSRIVEYGAFIDLGDGVEGLIHRNDLSWSVIANPREVVQPGQEIEAKILKIDNEKGKIALGLKQK---KEDPWGTVDQRY------EVNRKYQGKVKNLMDFGAFVELEEGVEGLVHISDLS-WARNVRHPQDIVKSGEVITVLVKEIDKTKKRISLSYKDTLPHPWDNIEHKYKIG--------------DLVKGKVNNLTDFGAFVEISEGIEGLLHISDMDWVKKINHPK--EVLEKGQEVEVKILNIDSHNRRLSLGLKQTTSDPWGDLEKMFKIG--DVLTGVVKNLVSYGAFVQLENGLEGLLHISEFSWQNDVKDPA-EVLKVGDQVTVAVYELDKHKQKIGLSLRRVSDDPWKGI-------------ERR--FPVNSVQQ-----------GKIVSVENSGAEVELAENVRGFIHISQIAQVRVQHPSEAVKEGDVVNVKVLELDRKNRKLKLSIKE 864
BLAST of mRNA_E-siliculosus-1a_F_contig1081.568.1 vs. uniprot
Match: A0A2E3DKS4_9PLAN (30S ribosomal protein S1 (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3DKS4_9PLAN) HSP 1 Score: 183 bits (465), Expect = 1.240e-45 Identity = 147/551 (26.68%), Postives = 271/551 (49.18%), Query Frame = 1 Query: 487 VDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDGE------ARKLVLSMRQKPRASSAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLAVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSTDR-SITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTDVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXNDRRGMKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDH-VSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGARGKKDVSVLLGRDPDEFIPGR-----VVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSM 2100 +D+G + G + +S+ +E ++ K GD V+V + V+ E +V ++K A ++K D Q V V + G + G + F+ SQ+ + D++D +GQ V+ + ++DE R N+ + E R A A LA E RKG V +AD+G FV++ G+DGLLH++ MS +R SE + QE+E+ I++++ K++L M + G P ++G VV++M+YGAFV+L+ ++G+VHIS++ +R++ V+IG ++ V IL D ++L L M++ N ++K ++ +N GRV ++T++GAF+ +++ DGLLH+S I+ + + + L+ QEV+ +V+ +D++ R+ L +++ D P+ + PG+ V I +G F+ +E ++GL+HISEM G V+ E + ++GQE++V++ ++T++ + LS+ Sbjct: 61 IDVGFKSEGSISLSEWGEE-----EEQPKVGDTVQVLIEEVEDEFGPANDPHGMVSLSKRKAEKILAWTAMMEKI------DEGQIVKGLVTRKIKGGLLVDI--GVNVFLPASQVDIRRPN--DIADY--IGQEVECEVLKIDE--ARRNIVVSRRSMIERQRRADREAL-----LAELSENELRKGVVKNIADFGAFVDLGGIDGLLHITDMSWERIGHPSEMVSI----DQEIEVMILKIDHEKEKIALGMKQKSANPWEGIEERYPVNTKVQGEVVNVMSYGAFVKLEAGIEGLVHISEMS-WTKRINHPNEMVQIGDEIDVVILSIDKGGQQLSLGMKQT---------------QANPWEEVEKRYPIDSVVN--------GRVRNLTNYGAFIELEEGIDGLLHVSDISWTRKIGHPNEVLEKSQEVECKVLSMDIERRRIALGIKQ------------LDADPWTAEIPERYQPGQKITGNVTKITNFGVFIGLEDGLEGLLHISEMTDGEVEDPETLVQVGQEIEVKVLRVDTEDRKIGLSL 547 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1081.568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1081.568.1 >prot_E-siliculosus-1a_F_contig1081.568.1 ID=prot_E-siliculosus-1a_F_contig1081.568.1|Name=mRNA_E-siliculosus-1a_F_contig1081.568.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=775bp PQPLSLSLSLSPTRRDRRPKQQRNMRTVRVNLPLAVMLGLAGSSTAFLQSback to top mRNA from alignment at E-siliculosus-1a_F_contig1081:6300..15720- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1081.568.1 ID=mRNA_E-siliculosus-1a_F_contig1081.568.1|Name=mRNA_E-siliculosus-1a_F_contig1081.568.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9421bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1081:6300..15720- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1081:6300..15720- >mRNA_E-siliculosus-1a_F_contig1081.568.1 ID=mRNA_E-siliculosus-1a_F_contig1081.568.1|Name=mRNA_E-siliculosus-1a_F_contig1081.568.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4650bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1081:6300..15720- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |