mRNA_E-siliculosus-1a_F_contig10794.554.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10794.554.1 vs. uniprot
Match: UPI0000161E54 (EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E54) HSP 1 Score: 1098 bits (2839), Expect = 0.000e+0 Identity = 548/607 (90.28%), Postives = 571/607 (94.07%), Query Frame = 1 Query: 1 MVRPSSDRNSRKKKKHKKIPPRAPPKDIQGFLQTVGSLYPKECLTESGNLPRKYKGTYCCQLFSRVRFGKEVSQQLRTRTVSVGFRAATTDEKRDTFQSKVNDAVDHLSRERVLASLFANFVFMERLQNGSALPEPDRAFFKSCLSSCIESRGGGSLNADFDRFSEITGLTRLMPPKKLNLDQQREHEARGMATATSTRATHHTEKRRISITMCFLRGRISRGDLDYKKYKTKLYNLAEKIITNFDGTPEDTQQLRRTSRAIDPCTDTDIIIDFARREKDFSDRDCGDGKIAKTIKHLYWMFNTYVAESRRMYDDAVSRAHLFAPGEDKACRKKRDEFVKHELGEKFTYAPPKDTAVLPICSTGAVFIHIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLLESTSIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKDQPYGVAIDRLSNEKKRTSCLATFIQYCKSWCANGPAL 1821 MVRPSSD NS KKKKHKKIPPRAPPK+I GFLQTV SLYP + LT SGNLP+ KGTYCCQLFSRVRFGKEVSQQLRTRTVSVGFRAATTDEKRDTFQSKVNDAVDHLSRERVLASLFANFVFMERLQNGSALPEPDRAFFKSCLSSCI SRGGGSLNADFDRFSEITGLTRL+PPK +NLDQQREHEA+ MATATSTRATHH EKRRISIT FLRGRISRGDLD KKY TKLYNLAEKIITNFDGTPEDTQ+LR SRAIDP TDT+IIIDFA +EK+FSDRD GDGK A+TIKHL WMFNTYVAESRRMY++AVSR+HLFAPG+DKACRKKRDEF+KHELGE+FTYAPPKDTAVLPICSTGAVFI+IDMKTL SWGLLHSNDAWWYKDVLRPFSKEAN+KCLVNKENARYASSEHGYLSSLL SGPDKCPWMIGESFLTDGVQIKLLL TL+HGRKAFSGSSELNE GYNKLPRA+ QLESLL EGRGVYNISSLL+STSIREDVVVMSADPGQAKVINVSSATA TWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRK QPYGVAIDRL NEKKRTSCLATFIQYC+ WC NGP L Sbjct: 1 MVRPSSDGNSHKKKKHKKIPPRAPPKNIPGFLQTVASLYPNQYLTASGNLPKSCKGTYCCQLFSRVRFGKEVSQQLRTRTVSVGFRAATTDEKRDTFQSKVNDAVDHLSRERVLASLFANFVFMERLQNGSALPEPDRAFFKSCLSSCILSRGGGSLNADFDRFSEITGLTRLVPPKSMNLDQQREHEAQRMATATSTRATHHAEKRRISITRWFLRGRISRGDLDCKKYATKLYNLAEKIITNFDGTPEDTQKLRTMSRAIDPGTDTNIIIDFAWQEKEFSDRDRGDGKSAETIKHLNWMFNTYVAESRRMYEEAVSRSHLFAPGKDKACRKKRDEFMKHELGEEFTYAPPKDTAVLPICSTGAVFIYIDMKTLGSWGLLHSNDAWWYKDVLRPFSKEANVKCLVNKENARYASSEHGYLSSLLESGPDKCPWMIGESFLTDGVQIKLLLKTLEHGRKAFSGSSELNEKGYNKLPRADVQLESLLGEGRGVYNISSLLKSTSIREDVVVMSADPGQAKVINVSSATARTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKGQPYGVAIDRLGNEKKRTSCLATFIQYCRRWCVNGPVL 607
BLAST of mRNA_E-siliculosus-1a_F_contig10794.554.1 vs. uniprot
Match: UPI0000161E53 (EsV-1-178/222 paralog 1 n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E53) HSP 1 Score: 882 bits (2278), Expect = 0.000e+0 Identity = 437/484 (90.29%), Postives = 455/484 (94.01%), Query Frame = 1 Query: 370 MERLQNGSALPEPDRAFFKSCLSSCIESRGGGSLNADFDRFSEITGLTRLMPPKKLNLDQQREHEARGMATATSTRATHHTEKRRISITMCFLRGRISRGDLDYKKYKTKLYNLAEKIITNFDGTPEDTQQLRRTSRAIDPCTDTDIIIDFARREKDFSDRDCGDGKIAKTIKHLYWMFNTYVAESRRMYDDAVSRAHLFAPGEDKACRKKRDEFVKHELGEKFTYAPPKDTAVLPICSTGAVFIHIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLLESTSIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKDQPYGVAIDRLSNEKKRTSCLATFIQYCKSWCANGPAL 1821 MERLQNGSALPEPDRAFFKSCLSSCI SRGGGSLNADFDRFSEITGLTRL+PPK +NLDQQREHEA+ MATATSTRATHH EKRRISIT FLRGRISRGDLD KKY TKLYNLAEKIITNFDGTPEDTQ+LR SRAIDP TDT+IIIDFA +EK FSDRD GDGK A+TIKHL WMFNTYVAESRRMY++AVSR+HLFAPG+DKACRKKRDEFVKHELGE+FTYAPPKDTAVLPICSTGAVFI+IDMKTL SWGLLHSNDAWWYKDVLRPFSKEAN+KCLVNKENARYASSEHGYLSSLL SGPDKCPWMIGESFLTDGVQIKLLL TL+HGRKAFSGSSELNE GYNKLPRA+ QLESLL EGRGVYNISSLL+STSIREDVVVMSADPGQAKVINVSSA A TWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRK QPYGVAIDRL NEKKRTSCLATFIQYC+ WC NGP L Sbjct: 1 MERLQNGSALPEPDRAFFKSCLSSCILSRGGGSLNADFDRFSEITGLTRLVPPKSMNLDQQREHEAQRMATATSTRATHHAEKRRISITRWFLRGRISRGDLDCKKYATKLYNLAEKIITNFDGTPEDTQKLRTMSRAIDPGTDTNIIIDFAWQEKKFSDRDRGDGKSAETIKHLNWMFNTYVAESRRMYEEAVSRSHLFAPGKDKACRKKRDEFVKHELGEEFTYAPPKDTAVLPICSTGAVFIYIDMKTLGSWGLLHSNDAWWYKDVLRPFSKEANVKCLVNKENARYASSEHGYLSSLLESGPDKCPWMIGESFLTDGVQIKLLLKTLEHGRKAFSGSSELNEEGYNKLPRADVQLESLLGEGRGVYNISSLLKSTSIREDVVVMSADPGQAKVINVSSAMARTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKGQPYGVAIDRLGNEKKRTSCLATFIQYCRRWCVNGPVL 484
BLAST of mRNA_E-siliculosus-1a_F_contig10794.554.1 vs. uniprot
Match: Q6XLT6_9PHYC (FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT6_9PHYC) HSP 1 Score: 834 bits (2154), Expect = 1.310e-296 Identity = 416/577 (72.10%), Postives = 483/577 (83.71%), Query Frame = 1 Query: 91 FLQTVGSLYPKECLTESGNLPRKYKGTYCCQLFSRVRFGKEVSQQLRTRTVSVGFRAATTDEKRDTFQSKVNDAVDHLSRERVLASLFANFVFMERLQNGSALPEPDRAFFKSCLSSCIESRGGGSLNADFDRFSEITGLTRLMPPKKLNLDQQREHEARGMATATSTRATHHTEKRRISITMCFLRGRISRGDLDYKKYKTKLYNLAEKIITNFDGTPEDTQQLRRTSRAIDPCTDTDIIIDFARREKDFSDRDCGDGKIAKTIKHLYWMFNTYVAESRRMYDDAVSRAHLFAPGEDKACRKKRDEFVKHELGEKFTYAPPKDTAVLPICSTGAVFIHIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLLESTSIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKDQPYGVAIDRLSNEKKRTSCLATFIQYCKSWCANGPAL 1821 FL+TVG LYP++CLT SGNLPRKYKG+YC QLFSRVRFG VSQ+LR RTVSVGF AAT D R+TFQSKVN+AVDHLSRERVLASLF+NFV+MERL++GS LPEPD FF SCLSSCI S+GG SLNADFDRFS +TGL+RL+PPK LNL QQR+ EA MAT+TSTRATHH+EKRRISIT FL RIS G+ K Y TKL+ LA+KIIT+F+GT E Q+LR ++A+D D + II+FA +EK+FSD + K A TI HL WMF TYV+ESRR Y++ +SRAH PGE+K KKR+EF+K ELG APP+DT+VLPICSTG+VFIH+DMKTLKSWGL HSNDAWWYK+VLRPFS+EANIKCL ++EN RYASSE GYLSSLL +GP KCPW +GESFLTDGVQIKLLLVTL+H R++FSGSS+LNE GY+KLPRA+A LE+LL++GRGVYNISSL+ES SIR D+VVMSADPGQAKVINV SAT+ TW K+DP ILKTSTCVFGDDYRR+TLAS SDEYET RR+ YG+AIDRL +EKKRTSCL TFIQYC+SWCAN AL Sbjct: 41 FLETVGKLYPQQCLTASGNLPRKYKGSYCAQLFSRVRFGNAVSQKLRRRTVSVGFLAATMDSTRETFQSKVNEAVDHLSRERVLASLFSNFVYMERLRDGSTLPEPDVKFFGSCLSSCIRSKGG-SLNADFDRFSSLTGLSRLVPPKHLNLGQQRQFEANQMATSTSTRATHHSEKRRISITRWFLWERISGGNSRPKDYATKLFILAKKIITDFEGTEEQKQKLREMAKALDSGMDPEPIIEFALKEKEFSDNFSANQKCAPTIAHLDWMFKTYVSESRRKYEEVLSRAHSLFPGEEKEISKKRNEFMKRELGRGDIIAPPRDTSVLPICSTGSVFIHVDMKTLKSWGLFHSNDAWWYKNVLRPFSREANIKCLRSRENTRYASSEQGYLSSLLDNGPAKCPWFVGESFLTDGVQIKLLLVTLEHTRESFSGSSQLNEEGYSKLPRADAPLETLLEKGRGVYNISSLVESESIRGDLVVMSADPGQAKVINVCSATSETWEKKDPVAILKTSTCVFGDDYRRETLASHSDEYETLRRRGTSYGIAIDRLRDEKKRTSCLTTFIQYCRSWCANSSAL 616
BLAST of mRNA_E-siliculosus-1a_F_contig10794.554.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE) HSP 1 Score: 695 bits (1794), Expect = 2.910e-242 Identity = 339/342 (99.12%), Postives = 342/342 (100.00%), Query Frame = 1 Query: 796 TDTDIIIDFARREKDFSDRDCGDGKIAKTIKHLYWMFNTYVAESRRMYDDAVSRAHLFAPGEDKACRKKRDEFVKHELGEKFTYAPPKDTAVLPICSTGAVFIHIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLLESTSIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKDQPYGVAIDRLSNEKKRTSCLATFIQYCKSWCANGPAL 1821 +DTDIIIDFARREKDFSDRDCGDGKIAKTIKHLYWMFNTYVAESRRMY++AVSRAHLFAPGEDKACRKKRDEFVKHELGEKFTYAPPKDTAVLPICSTGAVFIHIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLLESTSIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKDQPYGVAIDRLSNEKKRTSCLATFIQYCKSWCANGPAL Sbjct: 369 SDTDIIIDFARREKDFSDRDCGDGKIAKTIKHLYWMFNTYVAESRRMYEEAVSRAHLFAPGEDKACRKKRDEFVKHELGEKFTYAPPKDTAVLPICSTGAVFIHIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLLESTSIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKDQPYGVAIDRLSNEKKRTSCLATFIQYCKSWCANGPAL 710
BLAST of mRNA_E-siliculosus-1a_F_contig10794.554.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE) HSP 1 Score: 565 bits (1455), Expect = 2.080e-190 Identity = 287/386 (74.35%), Postives = 310/386 (80.31%), Query Frame = 1 Query: 664 RGDLDYKKYKTKLYNLAEKIITNFDGTPEDTQQLRRTSRAIDPCTDTDIIIDFARREKDFSDRDCGDGKIAKTIKHLYWMFNTYVAESRRMYDDAVSRAHLFAPGEDKACRKKRDEFVKHELGEKFTYAPPKDTAVLPICSTGAVFIHIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLLESTSIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKDQPYGVAIDRLSNEKKRTSCLATFIQYCKSWCANGPAL 1821 RGDL YKKY TKLY+LA+KIIT FDGTPE + LR+ +++IDP TD D I+DFAR KR EFVK+ELGE+FTYAPPKDTAVLPICSTG+VFI+IDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCL NKEN+RYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTL+HGRKAF GS++LNEAGYNKLPRA+ QLESLL+EGRGVYNISSLL+S SIREDVVVMSADPGQAKVINVSSATA TWA+QDPGVIL +STCVFGDDYRRDTLASRSD+YETFRRKDQPYGVAIDRL NEKKRTSCLATFI+YCKSWCANG AL Sbjct: 317 RGDLVYKKYATKLYDLAKKIITEFDGTPEYAEDLRQKAQSIDPGTDIDTILDFARN--------------------------------------------------------KRYEFVKNELGEEFTYAPPKDTAVLPICSTGSVFIYIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLANKENSRYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLEHGRKAFPGSTQLNEAGYNKLPRADVQLESLLREGRGVYNISSLLDSPSIREDVVVMSADPGQAKVINVSSATARTWARQDPGVILNSSTCVFGDDYRRDTLASRSDKYETFRRKDQPYGVAIDRLRNEKKRTSCLATFIRYCKSWCANGAAL 646
BLAST of mRNA_E-siliculosus-1a_F_contig10794.554.1 vs. uniprot
Match: D8LP46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP46_ECTSI) HSP 1 Score: 283 bits (725), Expect = 1.340e-82 Identity = 138/142 (97.18%), Postives = 141/142 (99.30%), Query Frame = 1 Query: 1135 GLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLLESTSIREDVVVMSADPGQAKV 1560 GLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSL GSGPDKCPWMIGESFLTDGVQIKLLLVTL+HGRKAFSGSSELNEAGYNKLPRA+AQLESLLKEGRGVYNISSLLESTSIREDV+VMSADPGQAKV Sbjct: 579 GLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLQGSGPDKCPWMIGESFLTDGVQIKLLLVTLEHGRKAFSGSSELNEAGYNKLPRADAQLESLLKEGRGVYNISSLLESTSIREDVIVMSADPGQAKV 720
BLAST of mRNA_E-siliculosus-1a_F_contig10794.554.1 vs. uniprot
Match: A0A835YVY1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVY1_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.710e-55 Identity = 188/639 (29.42%), Postives = 294/639 (46.01%), Query Frame = 1 Query: 49 KKIPPRAPPKDIQGFLQTVGSLYPKECLTESGNLPRKYKGTYCCQLFSRVRFGKEVSQQLRTRTVSVGFR-------AATTDEKRDTFQSKVNDAVDHLSRERVLASLFANFVFMERLQNGSALPEPDRAFFKSCLSSCIESRGGGSLNADFDRFSEITGLTRLMPPKKLNLDQQREHEARGMATATSTRATHHTEKRRISITMCFLRGRIS--RGDLDYKKYKTKLYNLAEKIITNFDGTPEDTQQLR-----RTSRAIDPCTDTDIIIDF-ARREKDFSDRDCGDGKIAKTIKHLYWMFNTYVAESRRMYDDAVSRA-HLFAPGEDKACRKKRDEFVKHELGEKFTY--APPKDTAVLPICSTGAVFIHIDMKTLKSW---GLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGS-----------GPD----------KCPWMIGESFLTDGVQIKLLLVT--LDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLL-ESTSIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILKTSTC--VFGDDYRRDTLASRSDEYETFRRKDQ-PYGVAIDRLSNEKKRTSCLATFIQYCKSWCANGPAL 1821 KK P AP + GF++ + G++P +KG L R+ G E + R+RTV+VG R A + + F++ A S+ R SLFAN+ + L+ GS LP +RA F++ LS + A F FS TG+ + + ++Q +A M TA + KR SI LR R++ RG++ K + +L+++ ++ TP QQL ++ ++ AR ++ +D I I Y + Y++ RR+Y+ + + LF+ +++ R+ F + E++ + P ++ + LP C TGA F ID K ++ L WWY+D FSK ANI CL +YA SEHG +L + PD +CP + SFLTDGVQ+KL LVT LD+G G L +AGY L + ++ GRGVYN+ ++ ES S + V++ + DPGQ ++++ A W + + ++ T+T GD YR DTLA S+E E RR+D YG A+D L+ +++RTS LA + YC+ W P L Sbjct: 18 KKKKPTAP---LNGFVERLYDAVGDAVRKIDGDMPDPHKGHV--NLLCRITHGAEAKRTTRSRTVTVGLRKLMLPDGAVAPERMEEVFRA----ASTFASKVRATTSLFANYTIIAALERGSPLPRFNRAPFEAWLSCVTGTTDNNDHIASFAAFSAATGIGHVTGGP-VGMNQIFTAQASEMLTALTNLYEIVYPKRVESIVRWALRRRLAQHRGNMTKKAFARRLHDIMTAVVAR--PTPS-LQQLNVLFVHHGLFGVEMAQFQPLLDALSARPVEERTD-------IPSKIAFCYRLQRDYLSADRRLYESVRAESWRLFSQDKER-----RNAF----MSERWLHDGKPAREMSPLPTCKTGAAFFRIDQKAIRKLFGRALKDCGGPWWYQDFFDVFSKRANIPCLRGS-GGQYARSEHGAFIALKKTQQQAAIRASLCDPDAIAAFDATALRCPLFVDASFLTDGVQVKLHLVTSALDNG--GAPGLWGLAKAGYRALGSTPRTMREIIDIGRGVYNVEAITSESLSDLDGVIISAFDPGQVEIVSGVEALGEEWRRPNAAALMSTATRRGFAGDRYREDTLAKLSEEKEEKRRRDNGAYGGALDALTGQRRRTSALAEYAAYCRVWAQESPHL 624
BLAST of mRNA_E-siliculosus-1a_F_contig10794.554.1 vs. uniprot
Match: A0A835ZCL1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL1_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.490e-34 Identity = 111/349 (31.81%), Postives = 166/349 (47.56%), Query Frame = 1 Query: 871 IAKTIKHLYWMFNTYVAESRRMYDDAVSRAHLFAPGEDKACRKKRDEFVKHELGEKFTY--APPKDTAVLPICSTGAVFIHIDMKTLKSW---GLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGS-----------GPD----------KCPWMIGESFLTDGVQIKLLLVT--LDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLL-ESTSIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILKTSTC--VFGDDYRRDTLASRSDEYETFRRKDQP-YGVAIDRLSNEKKRTSCLATFIQYCKSWCANGPAL 1821 I I Y + Y++ R+Y+ + + +DK ++R F + E++ + P ++ + LP C TGA F+ ID K ++ L WWY+D FSK ANI CL +YA SEHG +L + PD +CP + SFLTDGVQ+KL LVT LD+G G L +AGY L + ++ G GVYN+ ++ ES S + V+V + DPGQ W + + ++ T+T GD Y+ TLA S++ E RR+D YG A+D L+ +++RTS LA + YC++W P L Sbjct: 63 IPSKITFCYGLQRDYLSADHRLYESVRAESWRLV-SQDK---ERRSAF----MSERWQHDGKPAREMSPLPTCKTGAAFVRIDQKAIRKLFGCALKDCGGPWWYQDFFDVFSKRANIPCLRGS-GGQYARSEHGAFIALKKTQQQAAIRATLCDPDAIAAFDATALRCPLFVDASFLTDGVQVKLHLVTSALDNG--GAPGLWGLAKAGYRALGSMPRTMREIIDIGHGVYNVEAITSESLSDLDGVIVSAFDPGQE------------WRRPNAAALMSTATRRGFAGDRYQDGTLAKLSEQKEEKRRRDNAAYGGALDALTGQRRRTSALAEYTAYCRAWAHESPHL 388
BLAST of mRNA_E-siliculosus-1a_F_contig10794.554.1 vs. uniprot
Match: A0A835YWJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ2_9STRA) HSP 1 Score: 143 bits (361), Expect = 4.790e-32 Identity = 160/619 (25.85%), Postives = 253/619 (40.87%), Query Frame = 1 Query: 205 GKEVSQQLRTRTVSVGFRAATTDEKRDTFQSKVNDAVDHLSRERVLASLFANFVFMERLQNGSALPEPDRAFFKSCLSSCIESRGGGSLNAD-----------FDRF------SEITGLTRLMPPKKLNLDQQREHEARGMATATSTRATHHTEKRRISITMCFL----RGRISRGDLD--------YKKYKTKLYNLAEKIITNFDGTPEDTQQLRRTS----RAIDPCTDTDI--------IIDFARREKDFSDRDCGDGKIAKTIKHLYWMFNTYVAESRRMYDDAVSRAHLFAPGEDKACRKKRDEFVKHELGEKFTYAP--PKDTAVLPICSTGAVFIHID-------MKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDK----CPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLK----EG-RGVYNI-----------SSLLESTSIRED-------VVVMSADPGQAKVINVSSATASTWAKQDPGVILK---------TSTCVFGDDYRRDTLASRSDEYETFRR-KDQPYGVAIDRLSNEKKRTSCLATFIQYCKSW 1800 G + +LR +TVS + DA D++ + R LASL AN++ +L G P+ + FF CL+ ++ G G N + RF S + L PP +L+ + + A+ MATA T H ++RR++IT L R I D D + +++LAE ++T + G + R + R + D D+ I+D + D GD +K +HL + YV R Y D +S P + A R+ RD + P PK TA LP FI ID L +W + WWY + ++P++K ANI + + N YA SE G + ++ +G PW++ +F+TDG Q+KLLLVT + G +EL G+ ++ N +L +L+ EG GV+ + +++ + T ++ VVV DPGQ + +A W + T+ + G DYR L+ R++E E RR +Q YG A+ L++ RT YC +W Sbjct: 47 GADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTNGEGPGAAQLPPSTLQRFQDLCHNSNLQALQATWPPWRLH--EVFLYVAKDMATAAKTYIEVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPLTRAVHDLAE-LVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPD---GDSDASKR-RHLAQLQQLYVETDRADYQDLMSGLFEQFPDDAAARRENRDAV--------WGLLPVLPKLTAPLPRFKPQPAFIRIDRTGLGELFPGLAAW--MAGRGPWWYAEFMQPWAKAANITTMRQRTN-HYARSERGVMRAIERAGQPGYRILAPWLVDRTFMTDGHQLKLLLVTSHDSHQGPHGLTELPRRGH-QVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIGAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEMSGADYREWALSVRNEEGEVQRRGANQAYGNALAALADRHTRTGHYQVLRAYCTTW 646
BLAST of mRNA_E-siliculosus-1a_F_contig10794.554.1 vs. uniprot
Match: A0A836CNV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV6_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.030e-30 Identity = 156/613 (25.45%), Postives = 247/613 (40.29%), Query Frame = 1 Query: 205 GKEVSQQLRTRTVSVGFRAATTDEKRDTFQSKVNDAVDHLSRERVLASLFANFVFMERLQNGSALPEPDRAFFKSCLSSCIESRGGGSLN-----------ADFDRFSEITGLTRLM----PPKKLNLDQQREHEARGMATATSTRATHHTEKRRISIT----MCFLRGRISRGDLD--------YKKYKTKLYNLAEKIITNFDGTPEDTQQLRRTS----RAIDPCTDTDI--------IIDFARREKDFSDRDCGDGKIAKTIKHLYWMFNTYVAESRRMYDDAVSRAHLFAPGEDKACRKKRDEFVKHELGEKFTYAPPKDTAVLPICSTGAVFIHIDMKTLKSW--GL---LHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDK----CPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLK----EG-RGVYNISSL------------------LESTSIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILK---------TSTCVFGDDYRRDTLASRSDEYETFRR-KDQPYGVAIDRLSNEKKRTSCLATFIQYCKSW 1800 G + +LR +TVS + DA D++ + R LASL AN++ +L G P+ + FF CL+ ++ G G N + RF ++ + L P L + + A+ MAT ST H ++RR++IT LR I D D + + +++LAE ++T + G + R + R + D D+ I+D + D GD +K + L + YV R Y D +S P +D A R++ + V L PPK TA +P FI ID + GL + WWY + ++P++K ANI + + N YA SE G + ++ +G PW++ +F+TDG Q+KLLLV+ + G ++L GY ++ N +L +L+ EG GV+ + + E + VVV DPGQ + +A W + T+ V G DYR L+ R +E E RR +Q Y A+ L++ RT YC +W Sbjct: 790 GADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTNGAGPGAAQLPPSTLQRFQDLRNNSNLQALQAPGAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAITHWALFHALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAE-LVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPD---GDSDASKR-RLLAQLQQLYVETDRTDYQDLMSGLFEQFP-DDAAARRENRDAVWGLLP-----VPPKLTAPVPRFKPQPAFIRIDRTGMGELFPGLAARMAGRGPWWYAEFMQPWAKAANITTMRQRTN-HYARSERGVMRAIERAGQPGYRILAPWLVDRTFMTDGHQLKLLLVSSHDSHQGPHGLTKLPRRGY-QVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIGAEPATVADVTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPKGEGVTAQEVPGADYREWALSVRKEEGEAQRRGANQAYSDALAALADRHTRTGRYQVLRAYCTTW 1389 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10794.554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 23 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10794.554.1 >prot_E-siliculosus-1a_F_contig10794.554.1 ID=prot_E-siliculosus-1a_F_contig10794.554.1|Name=mRNA_E-siliculosus-1a_F_contig10794.554.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=607bp MVRPSSDRNSRKKKKHKKIPPRAPPKDIQGFLQTVGSLYPKECLTESGNLback to top mRNA from alignment at E-siliculosus-1a_F_contig10794:2..1822- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10794.554.1 ID=mRNA_E-siliculosus-1a_F_contig10794.554.1|Name=mRNA_E-siliculosus-1a_F_contig10794.554.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1821bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10794:2..1822- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10794:2..1822- >mRNA_E-siliculosus-1a_F_contig10794.554.1 ID=mRNA_E-siliculosus-1a_F_contig10794.554.1|Name=mRNA_E-siliculosus-1a_F_contig10794.554.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3642bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10794:2..1822- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |