Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 0 |
| Cds size | 306 |
| Model size | 307 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927579.743827-CDS-E-siliculosus-1a_F_contig1079:14400..14706 | 1622927579.743827-CDS-E-siliculosus-1a_F_contig1079:14400..14706 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1079 14401..14706 + |
| 1696318595.3439584-CDS-E-siliculosus-1a_F_contig1079:14400..14706 | 1696318595.3439584-CDS-E-siliculosus-1a_F_contig1079:14400..14706 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1079 14401..14706 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1079.552.1 >prot_E-siliculosus-1a_F_contig1079.552.1 ID=prot_E-siliculosus-1a_F_contig1079.552.1|Name=mRNA_E-siliculosus-1a_F_contig1079.552.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=102bp
AVHCCCCCCCCAPPTFLSPSMSNFSLTPSVSASLMPCCKHSPQGEARSST
TACFVSLLREEKQAQTRSSPDDLSPSFKDDRNTPPPAAENRQAHSSRAVR
FC back to topmRNA from alignment at E-siliculosus-1a_F_contig1079:14401..14707+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1079.552.1 ID=mRNA_E-siliculosus-1a_F_contig1079.552.1|Name=mRNA_E-siliculosus-1a_F_contig1079.552.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=307bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1079:14401..14707+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCCGTACATTGCTGCTGCTGCTGCTGCTGCTGTGCACCCCCGACGTTTCT
CAGCCCGTCCATGAGCAATTTCTCTCTCACTCCCTCCGTCTCTGCCTCTC
TCATGCCGTGTTGCAAACACAGCCCGCAGGGGGAAGCAAGGTCGTCGACA
ACTGCTTGCTTTGTCTCGCTCCTCCGAGAGGAAAAACAGGCGCAAACCCG
CTCCTCGCCTGATGACCTCTCCCCCTCCTTCAAAGACGATCGCAACACGC
CGCCGCCCGCTGCGGAAAACAGACAGGCACACAGCTCTCGCGCAGTGCGT
TTTTGTT back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1079:14401..14707+ >mRNA_E-siliculosus-1a_F_contig1079.552.1 ID=mRNA_E-siliculosus-1a_F_contig1079.552.1|Name=mRNA_E-siliculosus-1a_F_contig1079.552.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=612bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1079:14401..14707+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCCGTACATTGCTGCTGCTGCTGCTGCTGCTGTGCACCCCCGACGTTTCT
CAGCCCGTCCATGAGCAATTTCTCTCTCACTCCCTCCGTCTCTGCCTCTC
TCATGCCGTGTTGCAAACACAGCCCGCAGGGGGAAGCAAGGTCGTCGACA
ACTGCTTGCTTTGTCTCGCTCCTCCGAGAGGAAAAACAGGCGCAAACCCG
CTCCTCGCCTGATGACCTCTCCCCCTCCTTCAAAGACGATCGCAACACGC
CGCCGCCCGCTGCGGAAAACAGACAGGCACACAGCTCTCGCGCAGTGCGT
TTTTGTGCCGTACATTGCTGCTGCTGCTGCTGCTGCTGTGCACCCCCGAC
GTTTCTCAGCCCGTCCATGAGCAATTTCTCTCTCACTCCCTCCGTCTCTG
CCTCTCTCATGCCGTGTTGCAAACACAGCCCGCAGGGGGAAGCAAGGTCG
TCGACAACTGCTTGCTTTGTCTCGCTCCTCCGAGAGGAAAAACAGGCGCA
AACCCGCTCCTCGCCTGATGACCTCTCCCCCTCCTTCAAAGACGATCGCA
ACACGCCGCCGCCCGCTGCGGAAAACAGACAGGCACACAGCTCTCGCGCA
GTGCGTTTTTGT back to top
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