mRNA_E-siliculosus-1a_F_contig10781.548.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: D7G2I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I1_ECTSI) HSP 1 Score: 689 bits (1778), Expect = 1.140e-243 Identity = 344/382 (90.05%), Postives = 354/382 (92.67%), Query Frame = 1 Query: 1 QVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTTGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQPGRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNIVVQAQQAR 1146 +VNTVLTVPMMRTWCKA GTTLFIA AHDVYVGHQRPGA AEVPPTDAPWPAGLRREI SLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPRE Y +ST GYSVVTLRYAPLR+FVYIKSAD AGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTM KIILDIRRPPGHA+DCAAVYVALSRATGL DLNLLFPVTLQDLNQPQNPDI+A+V YLHRLD+ TM LFL DPGSFTPAYATLD I EAGPRPP KQP++ GRHGPGATRRVAHLIPNE NNCFFNSALALALAAWDGQPLPD AGTPAAGSFFA L LLRDSMFDEC LSPNIV + Q R Sbjct: 57 KVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREGYASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPPHKQPKRVGRHGPGATRRVAHLIPNEDNNCFFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIVRKMAQVR 438
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 687 bits (1772), Expect = 4.250e-223 Identity = 342/375 (91.20%), Postives = 351/375 (93.60%), Query Frame = 1 Query: 1 QVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTTGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQPGRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNIV 1125 +VNTVLTVPMMRTWCKA GTTLFIA AHDVYVGHQRPGA AEVPPTDAPWPAGLRREI SLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPRE Y +ST GYSVVTLRYAPLR+FVYIKSAD AGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTM KIILDIRRPPGHA+DCAAVYVALSRATGL DLNLLFPVTLQDLNQPQNPDI+A+V YLHRLD+ TM LFL DPGSFTPAYATLD I EAGPRPP KQP++ GRHGPGATRRVAHLIPNE NNCFFNSALALALAAWDGQPLPD AGTPAAGSFFA L LLRDSMFDEC LSPNIV Sbjct: 1764 KVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREGYASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPPHKQPKRVGRHGPGATRRVAHLIPNEDNNCFFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIV 2138
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5K6P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P6_9PHAE) HSP 1 Score: 447 bits (1151), Expect = 2.250e-150 Identity = 233/390 (59.74%), Postives = 275/390 (70.51%), Query Frame = 1 Query: 592 MRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQP-GRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNIVVQAQQARQAIFSNTSLPGAGSQMGDVASVFEAIAARCPQEGSPIWPDNFNDQQNRVVRTRREFGLDWRYANSCPVSNHSNLDITPDQTAALRNATVITIPNGTATTFHHKVQEFFSSGQASDLSIPGTSLCPFCAAGLGQTLCDWTLLPWTDHTAPSRVFFRSPEVFRGLHGRPMSPSPTLSMGAAYSLVGVSYHIAIGG-SRKNHFVTQL 1755 M KIILDIR PPG MD AAVYVALSRAT LD LNLLFPVTL+DLNQP + DI+A++ YLHRLD T+++FL D FTPA A+LD + GP P + Q R+ GRHGPGATRRVAHLI N NNCFFNSALAL LAAWDGQ LP ++AGTPAAGSFF+ L LLRDSMFD AL +IV GSP+WPD+ DQQ RV RTRR+FGLDWRYAN+C + NHS ++TPDQ+A LR ATVITIPNG + TF V +FF S +DL+IPG SLCP+CA + + +CDWTLLPWT +TAP R+FFRS VFRGL GRPM+PS T +MGAAYSLVGVSY + +GG + +NHFV+Q+ Sbjct: 1 MPKIILDIRPPPGTGMDPAAVYVALSRATSLDALNLLFPVTLEDLNQPPDRDILAIINYLHRLDKETLKVFLQDASRFTPASASLDAATDEGPTPSRTQRRRTTGRHGPGATRRVAHLIANSNNNCFFNSALALGLAAWDGQQLPPSSAGTPAAGSFFSALQLLRDSMFDGSALPDHIV----------------------------------------GSPLWPDSVFDQQARVARTRRDFGLDWRYANNCTIGNHSAREVTPDQSARLRAATVITIPNGVSATFQDNVFDFFRSSAPTDLAIPGQSLCPYCADNVHRNMCDWTLLPWTSNTAPDRIFFRSSCVFRGLDGRPMAPSMTFTMGAAYSLVGVSYFLPLGGGTNRNHFVSQV 350
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5KPV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV6_9PHAE) HSP 1 Score: 423 bits (1087), Expect = 1.420e-136 Identity = 227/430 (52.79%), Postives = 273/430 (63.49%), Query Frame = 1 Query: 628 GHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQP-GRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQ---PLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNIVVQAQQARQAIFSNTSLPGAGSQMGDVASVFEAIAARCPQEGSPIWPDNFNDQQNRVVRTRREFGLDWRYANSCPVSNHSNLDITPDQTAALRNATVITIPNGTATTFHHKVQEFFSSGQASDLSIPGTSLCPFCAAGLGQTLCDWTLLPWTDHTAPSRVFFRSPEVFRGLHGRPMSPSPTLSMGAAYSLVGVSYHIAIGGSRKNHFVTQLRVRGRWHKYDCLAGGAVLSSDAFDADWNSSSQCLLAYLKTSLCVATPPLY 1905 G AMD AAVYVAL RAT L+ LNLLFPVTL+DLNQP + DI+A++ YLHRLD T+++FL D FTPA A+LD + GP P + Q R+ GRHGPGATRRVAHLI N NNCFFNSALAL LAAWDG P P + F +LR S A+QAR I T + GAG MG+VA VFEAIA CP++GSP+WPD+ DQQ RV RTRR+FGLDWRYAN+C + NHS ++TPDQ+A LR ATVITIPNG + TF V +FF S +DL+IPG SLCP+CA + + +CDWTLLPWT +TAP R+FFRS VFRGL GR WHKYDCL GG V SSDA+D+ W+ SS +L YL++++CVATPP Y Sbjct: 248 GTAMDPAAVYVALFRATILEALNLLFPVTLEDLNQPPDRDILAIINYLHRLDKETLKVFLQDASRFTPASASLDAATDEGPTPSRTQRRRTTGRHGPGATRRVAHLIANSNNNCFFNSALALGLAAWDGPSPCPPPVCLHNNLQPNASFFPPSILRQSA-------------ARQARHDILHGTPITGAGCDMGNVAGVFEAIARACPRQGSPLWPDSVFDQQARVARTRRDFGLDWRYANNCTIGNHSAREVTPDQSARLRAATVITIPNGVSATFQDNVFDFFRSSAPTDLAIPGQSLCPYCADNVHRNMCDWTLLPWTSNTAPDRIFFRSSCVFRGLCGR------------------------------------------WHKYDCLQGGIVTSSDAYDSGWHVSSVHMLVYLRSAICVATPPPY 622
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE) HSP 1 Score: 419 bits (1078), Expect = 1.820e-125 Identity = 248/512 (48.44%), Postives = 287/512 (56.05%), Query Frame = 1 Query: 1 QVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTT-GYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQP-GRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNIVVQAQQARQAIFSNTSLPGAGSQMGDVASVFEAIAARCPQEGSPIWPDNFNDQQNRVVRTRREFGLDWRYANSCPVSNHSNLDITPDQTAALRNATVITIPNGTATTFHHKVQEFFSSGQASDLSIPGTSLCPFCA 1530 +V+T+LT PMMR C+A GT LF+A AHDVYV HQRPG E P T+APWP GLR EI SLDD KT DLPT A LA+GAPVV+HK PQFVLLGVCNNSDGIIRGIELDPRED+ T GYSVV LRYAPLRVFVYIK+ADDAGLHL+GL RGV+A+APVE++FTI GI KRKF FKRRQ+P DI+ ++ YLHRL T++LF D +FTPA A+LD + GP ++Q R+ GRHGPGA RRVAHLI N NNCFFNSALAL LAAWDGQ LP ++AGTPAAGSFF+ L LLRD MF+ L +IV S F AR ++TPDQ+A LR ATVITIPNG + TF V FF + +DL+IPG SL P CA Sbjct: 2002 KVSTILTAPMMRALCQARGTPLFVARAHDVYVKHQRPGYAEEKPATNAPWPTGLREEINSLDDAKTKDLPTLAFLAVGAPVVVHKKPQFVLLGVCNNSDGIIRGIELDPREDFLLDPTPGYSVVNLRYAPLRVFVYIKTADDAGLHLEGLDRGVVAIAPVEKEFTIEGIGKRKFIFKRRQLP-------------------------------------------------------------------DILGIINYLHRLGKETLKLFPQDASTFTPASASLDAATDEGPTSSRRQRRRTTGRHGPGAARRVAHLIANSNNNCFFNSALALGLAAWDGQQLPPSSAGTPAAGSFFSALQLLRDCMFNGSTLPDHIV--------------------------ESSFNCFRAR---------------------------------------------EVTPDQSARLRGATVITIPNGVSATFQDNVFNFFRTSAPTDLAIPGQSLYPCCA 2375
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE) HSP 1 Score: 341 bits (874), Expect = 1.060e-98 Identity = 187/383 (48.83%), Postives = 244/383 (63.71%), Query Frame = 1 Query: 1 QVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTTGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLD-----DIGEAGPRPPKKQPRQPGRHGPGATRR----VAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNI 1122 +V T LT+P MRTWC++ GTTLFI+ A D +VG + G E P A WP LR E+ SLDD KT DLP CLA+G P+V+HKSPQ VLLGVC+N DGI+R IELD RE GY VV L++ P+RVFV+I+S DD+GL L G RGV+A P+ER + G N R FT KRRQ+PLT+GCLSSV ++ILD+R+PPG +D A++YVA SRA L+D LLFPVTL DL++P++ D++A++ L RL T+ F DP +F P+ +L D GE R G G GA+RR AHL+PN NNCFFNSA+AL LA +DG P+ + TPAA +F + L++D+M + +I Sbjct: 1251 KVTTALTMPTMRTWCQSRGTTLFISSATDEFVGDEGGGRPKETPQAGAAWPPCLRNEVNSLDDTKTKDLPRQLCLAVGVPIVVHKSPQHVLLGVCSNRDGIVRAIELDQREQIQNHDGGYRVVHLKHLPVRVFVHIESMDDSGLKLPGFPRGVVAFGPIERNVVLTGKNGRNFTIKRRQLPLTSGCLSSV---------RVILDLRKPPGPRVDPASLYVARSRAKSLNDTYLLFPVTLNDLSRPRDADVVALIDCLRRLAKDTLNAFTSDPSTFIPSATSLPTDSDYDSGE------NDGGRGSGWLG-GASRRRQLQPAHLMPNSANNCFFNSAIALCLAVFDGHTPPNFSDCTPAATAFCPAIRLVKDNMLSGAPMPEHI 1617
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE) HSP 1 Score: 338 bits (866), Expect = 2.520e-97 Identity = 198/386 (51.30%), Postives = 249/386 (64.51%), Query Frame = 1 Query: 1 QVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTTGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGIN-KRKFTFKRRQIPLTAGCLSSV-------------YRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQP------RQPGRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFD 1098 +VNTVLTVPMMRTWCKAN T LFIAPA D +VG +RPG LR EI SLDD KTNDLPT ACLAIGAPVVLHK PQFV+LGVCNNSDGIIRGIE+ RE+ VFVYI++A DAGL L L RGV +V PVER F+IV KRKFTF R+Q+PLTAGCLS++ S ++R+IILD+++PP +D A+ Y+ALSRAT L+DL LLFPVTL+DL++P+N D++A++++LHRL++ T L D +FT A+L G+A +PGRH P +T +A LI N+ NN F NSA+AL LAA+DG PD TPA +FF + L++D+MF+ Sbjct: 1663 RVNTVLTVPMMRTWCKANITPLFIAPAMDSFVGDERPG---------------LRDEISSLDDAKTNDLPTLACLAIGAPVVLHKQPQFVILGVCNNSDGIIRGIEITQREE-------------------VFVYIQTAYDAGLKLPDLCRGVTSVGPVERNFSIVITKTKRKFTFSRKQVPLTAGCLSALGSDYIASSCLYHPILSHCVSLRRIILDLQKPPQPLVDPASSYLALSRATYLEDLYLLFPVTLEDLSRPRNKDVVALIEFLHRLEETTSLLSHPDRSTFTLTSASLSSDGDAIDGEDNTSTGRTRGGSRPGRHLPASTPSIARLIANKNNNYFLNSAMALTLAAFDGLSPPDGRDCTPAGAAFFPAIKLIQDTMFN 2014
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE) HSP 1 Score: 257 bits (656), Expect = 5.440e-72 Identity = 129/171 (75.44%), Postives = 143/171 (83.63%), Query Frame = 1 Query: 130 PPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTT-GYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAM 639 P T+APWP GLR EI SLDD T DLPT A LA+GAPVV+HK PQFVLLGVCNNSDGIIRGIELDP ED+ T GYSVV LRYAPL+VFVYIK+ADDAGLHL+GL RGV+A+APVE++ TI GI K KF FKRRQ+PL AGC+SSV+RSQGQTM KIILDI PPG AM Sbjct: 579 PATNAPWPTGLREEINSLDDANTKDLPTLAFLAVGAPVVVHKRPQFVLLGVCNNSDGIIRGIELDPLEDFLLDPTPGYSVVNLRYAPLQVFVYIKTADDAGLHLEGLDRGVVAIAPVEKECTIEGIGKGKFIFKRRQLPLPAGCVSSVFRSQGQTMPKIILDIHPPPGTAM 749
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5JCW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW5_9PHAE) HSP 1 Score: 239 bits (609), Expect = 5.540e-71 Identity = 136/279 (48.75%), Postives = 169/279 (60.57%), Query Frame = 1 Query: 112 GAVAEVPPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHT-STTGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQPG--RHGPGATRRVAH 939 G P A W LR E+ ++D+ +DLPT ACLA+GA VV+HKSPQFVLLGVCNNSDG+I IELD RE+YH S G+SVV LRY P+R LDGL RGV+A APVE+ F++VG+ KRKFT +RRQ+ TAG +VYVALSR L+DL LLFP TL+D N+P+N D++A+ YL RL+ AT+ FL DP FTPA A+L + + GPRP KQ + G RHG GATRR A+ Sbjct: 10 GGPRRTPANCAKWSPALRDEVNAIDNASADDLPTVACLAVGAAVVIHKSPQFVLLGVCNNSDGVIDSIELDQREEYHVHSNPGHSVVYLRYTPVR--------------LDGLPRGVVAFAPVEKPFSVVGVGKRKFTIQRRQLLPTAG-------------------------------SVYVALSRVACLEDLYLLFPATLEDPNKPRNKDVVALTDYLQRLEKATLADFLQDPTRFTPASASLAHLPDVGPRPMAKQQQVKGANRHGHGATRRTAY 243
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5JJZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ6_9PHAE) HSP 1 Score: 184 bits (468), Expect = 1.590e-51 Identity = 91/111 (81.98%), Postives = 97/111 (87.39%), Query Frame = 1 Query: 793 MELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQPGRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNIV 1125 MELFL PGSF PAYA+L+DIGEA PRPP KQP++ GRHGPGATRR+ HLIPNE NNCFFNSALALALAAWDGQPLP A AGTPAAGSFFA L LLRDSMF+ C LSPNIV Sbjct: 1 MELFLIHPGSFAPAYASLNDIGEAVPRPPNKQPKRTGRHGPGATRRITHLIPNENNNCFFNSALALALAAWDGQPLPHAPAGTPAAGSFFAALQLLRDSMFNGCDLSPNIV 111 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10781.548.1 >prot_E-siliculosus-1a_F_contig10781.548.1 ID=prot_E-siliculosus-1a_F_contig10781.548.1|Name=mRNA_E-siliculosus-1a_F_contig10781.548.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=261bp MMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAGLRREIMback to top mRNA from alignment at E-siliculosus-1a_F_contig10781:2..2253- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10781.548.1 ID=mRNA_E-siliculosus-1a_F_contig10781.548.1|Name=mRNA_E-siliculosus-1a_F_contig10781.548.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2252bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10781:2..2253- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10781:2..2253- >mRNA_E-siliculosus-1a_F_contig10781.548.1 ID=mRNA_E-siliculosus-1a_F_contig10781.548.1|Name=mRNA_E-siliculosus-1a_F_contig10781.548.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1566bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10781:2..2253- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |