Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 162 |
| Model size | 162 |
| Exons | 1 |
| Hectar predicted targeting category | no signal peptide or anchor |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927578.612659-CDS-E-siliculosus-1a_F_contig10775:262..424 | 1622927578.612659-CDS-E-siliculosus-1a_F_contig10775:262..424 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig10775 263..424 + |
| 1696318594.8718264-CDS-E-siliculosus-1a_F_contig10775:262..424 | 1696318594.8718264-CDS-E-siliculosus-1a_F_contig10775:262..424 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig10775 263..424 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10775.541.1 >prot_E-siliculosus-1a_F_contig10775.541.1 ID=prot_E-siliculosus-1a_F_contig10775.541.1|Name=mRNA_E-siliculosus-1a_F_contig10775.541.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=54bp
MSLRCPHAASACVGHSLSPLPVVRLSCGSNTSNQRDFLVTGHKYGHTRQS
LRL* back to topmRNA from alignment at E-siliculosus-1a_F_contig10775:263..424+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig10775.541.1 ID=mRNA_E-siliculosus-1a_F_contig10775.541.1|Name=mRNA_E-siliculosus-1a_F_contig10775.541.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=162bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10775:263..424+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAGTCTGCGGTGCCCCCATGCTGCGTCAGCCTGTGTGGGGCACTCTCT
TTCTCCTCTGCCTGTCGTGCGTTTGTCCTGCGGATCTAATACAAGCAATC
AACGCGACTTTCTAGTCACTGGACACAAATACGGGCATACCCGGCAATCA
CTCCGGCTCTAG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10775:263..424+ >mRNA_E-siliculosus-1a_F_contig10775.541.1 ID=mRNA_E-siliculosus-1a_F_contig10775.541.1|Name=mRNA_E-siliculosus-1a_F_contig10775.541.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=324bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10775:263..424+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAGTCTGCGGTGCCCCCATGCTGCGTCAGCCTGTGTGGGGCACTCTCT
TTCTCCTCTGCCTGTCGTGCGTTTGTCCTGCGGATCTAATACAAGCAATC
AACGCGACTTTCTAGTCACTGGACACAAATACGGGCATACCCGGCAATCA
CTCCGGCTCTAGATGAGTCTGCGGTGCCCCCATGCTGCGTCAGCCTGTGT
GGGGCACTCTCTTTCTCCTCTGCCTGTCGTGCGTTTGTCCTGCGGATCTA
ATACAAGCAATCAACGCGACTTTCTAGTCACTGGACACAAATACGGGCAT
ACCCGGCAATCACTCCGGCTCTAG back to top
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