mRNA_E-siliculosus-1a_F_contig1077.540.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1077.540.1 vs. uniprot
Match: D7G6K7_ECTSI (Transient Receptor Potential Channel. C terminally truncated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6K7_ECTSI) HSP 1 Score: 981 bits (2537), Expect = 0.000e+0 Identity = 587/609 (96.39%), Postives = 597/609 (98.03%), Query Frame = 1 Query: 1 MLTATDRLGNTILTAAVSSKSVGTFEAVFNAAKRYLHRGQFAKMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHHEVADEPCSRLDALFEACVEDLLNAHPEDVDSGFKTLSFLMAGSARPSASDLKKLSKHHKSRDGFKNCCLRAVTSAANPFMPGLLLSIRLAEAAKEANEGEQRHIDEIRASVEALLLEIFERLPRTVRAFDEETNGGCTGMFEPQFLGGHQPLGFERPINMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGDGGDDVPRGCKNILARLSVLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGEDGISDVEFTWGEGSFATIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIRGVDWTSPWGPAFYALSAPLLVCRVLFFAQVLPFQGPMIKVIPRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTV 1827 MLTATD+LG+TILTAAVSSKSVGTFEAVFNAAKRYLHRGQFAKMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHHEVADEPCSRLDALFEACVEDLLNAHPEDVD GF TLSFLMA SARPSASDLKKLSKHHKSRDGFKNCCLRAVT+AANPFMPGLLLSIRLAEAAKEANEGEQRHIDEIRASVEALLLEIFERLPRTVRAFDEET GGCTGMFEPQ LGGH PLGFERP+NMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGDGG+DVP GCK+IL+RLSVLLQAAQDDLPNLAFFPGAQF VAGVAADPSTYYRVPAMRMLLDFVAYV +IAALGYLVFFHSPTGGVLG+DGIS+VEFTWGEGSFA IFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIRGVDWTSPWGPAFYALSAPLLVC VLFFAQVLPFQGPMIKVI RMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTV Sbjct: 1 MLTATDQLGHTILTAAVSSKSVGTFEAVFNAAKRYLHRGQFAKMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHHEVADEPCSRLDALFEACVEDLLNAHPEDVDIGFNTLSFLMASSARPSASDLKKLSKHHKSRDGFKNCCLRAVTTAANPFMPGLLLSIRLAEAAKEANEGEQRHIDEIRASVEALLLEIFERLPRTVRAFDEETKGGCTGMFEPQILGGHHPLGFERPVNMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGDGGEDVPSGCKSILSRLSVLLQAAQDDLPNLAFFPGAQFAVAGVAADPSTYYRVPAMRMLLDFVAYVEIIAALGYLVFFHSPTGGVLGDDGISNVEFTWGEGSFAAIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIRGVDWTSPWGPAFYALSAPLLVCSVLFFAQVLPFQGPMIKVISRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTV 609
BLAST of mRNA_E-siliculosus-1a_F_contig1077.540.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI) HSP 1 Score: 673 bits (1737), Expect = 7.020e-221 Identity = 414/816 (50.74%), Postives = 520/816 (63.73%), Query Frame = 1 Query: 376 EVADEPCSRLDALFEACVEDLLNA-HPEDVDSGFKTLSFLMAGSARPSASDLKKLSKHHKSRDGFKNCCLRAVTSAANPFMPGLLLSIRLAEAAKEANEGEQRHIDEIRASVEALLLEIFERLPRTVRAFDEETN-GGCTGMFEPQFL---GGHQPLGFERPINMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGD----GGDDVPRGCKNILARLSVLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGEDGISDVEFTWGEGSFATIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIRGVDWTSPWGPAFYALSAPLLVCRVLFFAQVLPFQGPMIKVIPRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTVKLLNLLVAILSTSHAEVQDNVKVEVKVSKARVVEHYQWVVDHHELPAPFNLLQLVLSVAVSSVVMLRWLVLVMP------ERIDTLEEG-------WEQTKASCVRVRKAFGQFVFWLVLGLVAVSAGAVLWMVSGLPLFPYSQFAWY--------------------KQYKAEELKQQ-------HNALWVGLRWWSICWRCFQ-----ILVW------CVVGAPVSLFVLWLAA----FFVQV--LSSCRHIPD----EEYPSTVERLAIERMLLKGDAGKNADKLRQFLEDPMDDEYVRQDEKDRRATVEHIKLLRNRLE 2613 +VA+ S +D F D+ H +D FK L L+A SARPSAS+LK LS+ S D FK CCLRAVTSAANPF+PG+ LSIRL EAAK+A+EGE+R + E ++S++ +LLE+FERLP+TVR F+E+ CT + EP+ + G LG P++MI+S Q+ TFC VPL+MDFLS +F GLPDL DT G+L+N L L + D G D +P L L + Q D+ P L F PGAQF+VA + A P+ YY VPAMRMLLDFV YV M+AAL Y V FHS TG G DGI+D F+ EG+ A IFI+AG YREG EM GI YFKDQWNVLDAL +L L VGLVIR DWTS WGPAFYALSAPL+V RVLFFAQ+L FQGPM++VI RMT TLL+FG VM+VVM GF MA HV+FRD + FG T LGLF+AMLGE FF+ F+GGRYD VATIL VVYLF+VTV LLNLL+AILST HA+VQ+N KVSKAR++ HY+ VVD+ LPAPFNL+QL+LS+ V ++ +L ER E G WE + R+AFGQ V+WLVLG VAV+ GA+LW +SG F Y+Q+AW+ ++ AE++ ++ + LW L+ I +R +L W C++GAP LF+ WL FF L++CR D EE P + IE ML KG +G A+KL +FLEDPM+D+ VRQDEK+++ TVEHIKLLR+RLE Sbjct: 462 KVAERRSSWMDGAFSYEARDVPERFHADD----FKMLFSLIANSARPSASELKGLSRKAASGDVFKRCCLRAVTSAANPFIPGVTLSIRLTEAAKQASEGERRALFETKSSIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLG--GPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDGLFRDEHGLGLDGIPVALLEAL--LKGVRQGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMLFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSLGVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAILWGLSG---FFYAQYAWHSWLSTTDEQDCFFGFLLESDEEPDAEDMSKEVVMFGSCGSPLWRMLQGLGIVFRFLLEWIGVVLAWFLTFLLCILGAPCCLFLRWLVLPGTEFFSWCWKLAACRSTQDPDEDEESPKRLSTPTIESMLKKGRSGVGAEKLLEFLEDPMNDKDVRQDEKEKKTTVEHIKLLRDRLE 1266
BLAST of mRNA_E-siliculosus-1a_F_contig1077.540.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE) HSP 1 Score: 646 bits (1667), Expect = 2.660e-208 Identity = 402/813 (49.45%), Postives = 504/813 (61.99%), Query Frame = 1 Query: 376 EVADEPCSRLDALFEACVEDLLNA-HPEDVDSGFKTLSFLMAGSARPSASDLKKLSKHHKSRDGFKNCCLRAVTSAANPFMPGLLLSIRLAEAAKEANEGEQRHIDEIRASVEALLLEIFERLPRTVRAFDEETN-GGCTGMFEPQFLG---GHQPLGFERPINMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGD----GGDDVPRGCKNILARLSVLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGEDGISDVEFTWGEGSFATIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIRGVDWTSPWGPAFYALSAPLLVCRVLFFAQVLPFQGPMIKVIPRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTVKLLNLLVAILSTSHAEVQDNVKVEVKVSKARVVEHYQWVVDHHELPAPFNLLQLVLSVAVSSVVMLRWLVLVMP------ERIDTLEEG-------WEQTKASCVRVRKAFGQFVFWLVLGLVAVSAGAVLWMVSGLPLFPYSQFAW------------YKQYKAEELKQQHNA------------LW-----------VGLRWWSICWRCFQILVWCVVGAPVSLFVLWL----AAFFVQV--LSSCRHIPD----EEYPSTVERLAIERMLLKGDAGKNADKLRQFLEDPMDDEYVRQDEKDRRATVEHIKLLRNRLE 2613 +VA++ S +D F D+ H +D FK L L+A SARPSAS LK+LS+ S D FK CCLRAVTSAANPF+PG+ LSIRL+EAAK+A+EGE+R + + ++S++ LLLE+FERLP+TVR F+E+ CT + EP+ + G LG P++MI+S Q+ TFC VPL+MDFLS +F GLPDL DT G+L+N L L + D G D +P + A L + Q D+ P L F PG QF+VA + A P+ YY VPAMRMLLDFV YV M+A L V FHS T G DGI + EG+ A IFI+AG YREG EM GI YFKDQWNVLDAL +L L VGLVIR DWTS WGPAFYALSAPL+V RVLFFAQ+L F GPM++VI RMT TLL+FG VM+VVM GF MA HV FRD FG T LGLF+AMLGE F+ F+GGRYD VATIL VVYL +VTV LLNLL+AILST HA+V +N KVSKAR++ HY+ VVD+ LPAPFNL+QL+LS+ V + + + +L ER T E+G WE + R+AFGQFV+WLVLG VAV+ GA+LW +SGL Y+ +W + Q EE ++ A LW L+W + F I + C++GAP L + WL FF L++CR D ++ P IE ML KG G A+ L +FLEDPM+D+ VRQDEK+R+ TVEHIKLLR+RLE Sbjct: 479 KVAEQRSSWMDGAFSHEARDISERFHADD----FKMLFSLIANSARPSASALKELSRKAASGDIFKRCCLRAVTSAANPFVPGVTLSIRLSEAAKQASEGERRALFDTKSSIDELLLEMFERLPQTVRGFEEQAGMDSCTNVLEPELMRATTGSNDLG--GPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHHLWYLEEDGLFRDEHGFGSDGIPVAL--LAALLKGVRQGIWDNTPILTFLPGTQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAVLSSFVLFHSTTESDSGLDGIVAHRLSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGILFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFHGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVFFRDVADFGDTLLGLFKAMLGETGIFDEFSGGRYDPVATILVVVYLCIVTVMLLNLLIAILSTEHAQVMENTAEAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLILSLGVIVLTLPYYFLLEAKREHSETERPATDEDGRLFWGNVWEGARHRHRSARRAFGQFVWWLVLGSVAVAGGAMLWSLSGLFYAQYACHSWLSTTDEQNSFFGFLQEGDEEPDEEDTAKDVVVFGSCGSPLWRMLQGVRIVFRSVLQWIGVVLAWFLIFLLCILGAPCCLVLRWLILPGTEFFSWCWKLAACRSTQDPGEDKKSPMRSSTPTIESMLKKGCCGAGAENLLEFLEDPMNDKDVRQDEKERKTTVEHIKLLRDRLE 1283
BLAST of mRNA_E-siliculosus-1a_F_contig1077.540.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE) HSP 1 Score: 629 bits (1621), Expect = 1.560e-204 Identity = 404/825 (48.97%), Postives = 504/825 (61.09%), Query Frame = 1 Query: 403 LDALFEACVEDLLNAHPEDVDSGFKTLSFLMAGSARPSASDLKKLSKHHKSRDGFKNCCLRAVTSAANPFMPGLLLSIRLAEAAKEANEGEQRHIDEIRASVEALLLEIFERLPRTVRAFDEETNGGCTGMFEPQFLGGHQPLGFERPINMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGD-------GGD-DVPR-------------------------------------GCKNILARLS---VLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGEDGISDVEFT-----WGEGSFATIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIRGVDWTSPWGPAFYALSAPLLVCRVLFFAQVLPFQGPMI-----------KVIPRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTVKLLNLLVAILSTSHAEVQDNVKVEVKVSKARVVEHYQWVVDHHELPAPFNLLQLVLSVAVSSVVMLRWLVLVMPERIDTLEEGWEQT----KASCVRVRKAFGQFVFWLVLGLVAVSAGAVLWMVSGLPLFPYSQFAWYKQYKAEELKQQHNA-LWVGLRWWSICWRCFQIL-VWCVVGAPVSLFVLWLAAFFVQVLSSCRHIPDEEYPST----VERLAIERMLLKGDAGKNADKLRQFLEDPMDDEYVRQDEKDRRATVEHIKLLRNRLEKTTKIELQHLNERL 2655 LD +F C E L+ HP G K LS LMA SARPS S LKKL+ H + FK+CCL AVTSAANPF+PGL+LSIRLAEAA++ANEGE+R I +I+ SV ALLLE+ ERLPR+VR+F+ + + C MFEP+FL + FE+P+ M+LS+Q+Q FCNVPLVMDFL R+F LP L+D + VL +S ++ L G V GD G D DV + G K++LA LLQ A D P+L FPGAQ +VAG+AA P+ Y+RVPAMRM+LD V Y+ MI AL V FHS E G +D + W E + A IFI GV++EG EM+ +Y +DQWN LD L+LL L++GLV R VDW S GPAFYAL+APLLV R LFF Q+ P QGPMI +V+ RMT LLKFGFVM V++ GF MAFHVLFRDFDSFG +FL LF+AMLG+ DFF+ F+G YD VAT L VVYLF+VTV LLNLLVAILSTSHA+V +N++ E KVS AR+++HYQ VV + LP PFNLLQL+ V + W + R + +QT K + KA G VFW+VLG VAV G++LWM S LP + + W K ++ + + + WS+ R I+ WCV GAPV L +LWL A +VLS C D + + IE MLLK G A KLR+FL+DPMDD+ VRQDEKDRR TVEHIKLLRNRLE T+K +L+ L E L Sbjct: 426 LDEVFSKCAERQLDRHPGR-PFGLKLLSSLMACSARPSPSHLKKLAIAHARGEAFKDCCLDAVTSAANPFIPGLVLSIRLAEAAEKANEGERRAITDIQESVNALLLEVLERLPRSVRSFERDMDD-CRDMFEPKFLDVFED--FEKPLEMMLSRQQQRELFCNVPLVMDFLKRKFTLSLPRLRDPKEVLADSNEILHLSRGGVKGDVCLVLDWGVDVDVQKEDGHLNDEQIDXXXXXXXXQADDHASLRPPWKHPTLFGSKSLLASFRSPRALLQGANDRFPSLTPFPGAQVIVAGLAARPNDYFRVPAMRMVLDLVVYIGMIVALSTFVLFHSQAEKSYVE-GSTDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTIGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPMIQASGETKRFPQRVVFRMTRILLKFGFVMAVIVLGFTMAFHVLFRDFDSFGESFLDLFKAMLGDTDFFKVFSGDTYDVVATFLLVVYLFIVTVMLLNLLVAILSTSHAQVAENIEREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLI-------VWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIGPVVFWVVLGPVAVIGGSLLWMGSVLP----AMYFWRKHHRLQNKRDNGGGDSKRSMHLWSLFLRYVVIIPCWCVFGAPVYLLLLWLNASR-RVLSRCPCNDDTRSTAKSRHGASKSTIESMLLKSPGGVGAQKLREFLDDPMDDKDVRQDEKDRRTTVEHIKLLRNRLENTSKEQLKGLEEAL 1233
BLAST of mRNA_E-siliculosus-1a_F_contig1077.540.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE) HSP 1 Score: 583 bits (1503), Expect = 1.350e-189 Identity = 379/813 (46.62%), Postives = 485/813 (59.66%), Query Frame = 1 Query: 403 LDALFEACVEDLLNAHPEDVDSGFKTLSFLMAGSARPSASDLKKLSKHHKSRDGFKNCCLRAVTSAANPFMPGLLLSIRLAEAAKEANEGEQRHIDEIRASVEALLLEIFERLPRTVRAFDEETNGGCTGMFEPQFLGGHQPLGFERPINMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAG-------LVLG---------------DG------GDDVPR---------------------GCKNILARLS---VLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGEDGISDVEFT-----WGEGSFATIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIRGVDWTSPWGPAFYALSAPLLVCRVLFFAQVLPFQGPMIKVIPRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTVKLLNLLVAILSTSHAEVQDNVKVEVKVSKARVVEHYQWVVDHHELPAPFNLLQLVLSVAVSSVVMLRWLVLVMPERIDTLEEGWEQT----KASCVRVRKAFGQFVFWLVLGLVAVSAGAVLWMVSGLPLFPYSQFAWYKQYKAEELKQQHNALWVGLRWWSICWRCFQILVWCVVGAPVSLFVLWLAAFFVQVLSSCRH-IPDEEYPSTVERLAIERMLLKGDAGKNADKLRQFLEDPMDDEYVRQDEKDRRATVEHIKLLRNRLEKTTKIELQHLNERL 2655 LD +F C E L H G + LS L+A ARPS S LKKL+ H + F++CCL AV SA+NPF+PGL+LSIRLAEAA++ NEGEQR I ++ A V LLLEI E LPR+VR+F+ + + MFEP L FE P+ MILS+++Q FC+ PLVMDF+ R+F GLP ++D + +L +S+++ L G LVLG DG +D+ + G +LA LLQ A D LP L FP AQF+VAG+AA + Y+RVP MRM+LD V Y+ ++ AL V F S DG +D E W E + AT I+ G+YRE EM+ +Y +DQWN LD L LL ++G + R VDWT GPAFYALSAPLLV R LFF Q+ P QGPM VI RMTT LLKFGFVM VVM GF MAFHVLFRDFDSFG +FL LF+AM GE FF F+G YD+VAT+L VVYL +VT+ LLNLLVAILSTSH++VQ N+ E K S AR+++HYQ VV + LPAPFNLLQLV V + W V R + + Q + + R KA G VFW+VLG VAV G +LW+VS P S + W K ++ + K+ + + +G R++ F I +WC++GAPV LFVLWL A ++L C + + S R IE +LL+G G A KLR+FL+DPMDD+ VRQDE+D+R TVEH+KLLRNRLE T + EL+ L L Sbjct: 244 LDEIFSKCAERHLRKHAGR-PYGLRLLSSLVASCARPSPSHLKKLAIAHAGGEKFRDCCLDAVASASNPFIPGLVLSIRLAEAAEKTNEGEQRAITDVHARVNDLLLEILEGLPRSVRSFERDMDASGD-MFEPASLPSKD---FETPMEMILSRRQQTEIFCSAPLVMDFIKRKFTLGLPSMRDKKEILADSKEIFHLSGGDVRGNVCLVLGTFVPITVVDADVRREDGPFIDLKAEDMDKKAARADHGQLSAQAWAHPTLLGSNCLLASFRSPRALLQGANDRLPCLTPFPAAQFIVAGLAARSNDYFRVPVMRMVLDLVVYLGVLVALSTFVLFRSQAEQSR-VDGSADEEIVFRKLNWSEATCATAVIAGGMYREWFEMARNYGRYLEDQWNALDLLGLLFFTIGFIARVVDWTQQLGPAFYALSAPLLVSRALFFVQIHPLQGPM--VIFRMTTVLLKFGFVMAVVMIGFTMAFHVLFRDFDSFGESFLELFKAMFGETTFFNAFSGDTYDAVATMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQLV-------VWPIAWCVGGCCGRSTSGSQSTRQELNRGREAYERGNKAIGPVVFWVVLGPVAVVGGTLLWIVST----PLSVYLWRKHHREGDRKRL-SLISLGCRYF------FIIPLWCILGAPVYLFVLWLGASR-RLLCRCNYDVSIAHAESGHFRCTIESILLEGPGGVGAKKLREFLDDPMDDKDVRQDERDKRTTVEHVKLLRNRLENTIQDELRGLENAL 1029
BLAST of mRNA_E-siliculosus-1a_F_contig1077.540.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 472 bits (1214), Expect = 2.860e-144 Identity = 320/781 (40.97%), Postives = 442/781 (56.59%), Query Frame = 1 Query: 460 VDSGFKTLSFLMAGSARPSASDLKKLSKHHKSRDGFKNCCLRAVTSAANPFMPGLLLSIRLAEAAKEANEGEQRHIDEIRASVEALLLEIFERLPRTVRAFDEETNGGCTGMFEPQFLGGHQPLGFERPINMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAG-----------LVLGDGG------------------DDVPRGCKNILAR------LS--VLLQAAQ-----DDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGEDGISDVEFTWGEGSFATIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIRGVDWTSPWGPAFYALSAPLLVCRVLFFAQVLPFQGPMIKVIPRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTVKLLNLLVAILSTSHAEVQDNVKVEVKVSKARVVEHYQWVVDHHELPAPFNLLQLVLSVAVSSVVMLRWLVLVMPERIDTLEEGWEQTKASCVRVRKAFGQFVFWLVLGLVAVSAGAVLWMVSGLPLFPYSQFAWYKQYKAEELKQQHNALWVGLRWWSICWRCFQILVWCVVGAPVSLFVLWLAA--FFVQVLSSC-----RHIPDEEYPSTVERLAIERMLLKGDAGKNADKLRQFLEDPMDDEYVRQDEKDRRATVEHIKLLRNRLEKTTKIELQHLNERL 2655 +D LS L+ +DL +LS+ +S + + C L V + NPF+PG+ LSI A++A A EGE+R + ++ V+ LLLEI ERLP+TV+ FD G C+ +FEP+ L G P+ + L +++ + TFC PL+ DFLSRRF +GLP L+DT+ +L + +L L G L L + G D + + K + +R LS +LLQ A + +L F PGAQF +AG+ P YYRVPAMRMLLD Y+ M+ +V FH EDG T GE +FA +I AG+ EG EM Y D WN+LD L L ++ GL++R D + WG A YALSAPL+ R+LFFAQ+L F GPMI+V+ MT L+KFG V++VVM GFAM+FH LF D D+FG T L LF+AMLGEVDFF +F G +YDSVAT LFV+YL V+ V LLNLL+A+LSTSH++V+ E KVSKAR++EHY+ VVD LP PFNL+QL+LS+ V M+R D +G T+A +A G+ FWL LG VA + G VLW++S L ++ F W+ + ++ + + AL VG S+ R + WCV+GAP+ L WL A ++++ C R P Y ++ ++ +L G A L+ +LEDP+ D VR DE+ ++ TVE+IK LRNRLEKT L HL+ +L Sbjct: 527 LDWAIGALSCLLQYPTMFDTADLIQLSRE-RSAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTG-CSAVFEPE-LSREDARGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALDEEGRRKEDGRSLDRCLLLDLQDKIGQEGKLLDSRKIIDTLLSPCILLQGANCAGLWNTAVSLTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFFSTVVLFH--------EDG----PLTPGEAAFA-FYILAGIITEGQEMRRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILSLPV----MVR----------DRSGQGTASTRAQ-----EAVGRMAFWLALGPVAAACGTVLWVLSSL----FAPFVWHTHFYSKA-QARRGALSVG----SLLVRYLIVFFWCVLGAPLYLMAFWLTAPMKWLKLRPWCWVWDRRQAP---YIASWNPKSVNDLLEGNSGGLVAGDLQMYLEDPIGDPEVRPDERRKQTTVENIKQLRNRLEKTI---LTHLDAKL 1257
BLAST of mRNA_E-siliculosus-1a_F_contig1077.540.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE) HSP 1 Score: 390 bits (1001), Expect = 1.120e-121 Identity = 255/521 (48.94%), Postives = 319/521 (61.23%), Query Frame = 1 Query: 1189 MRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGEDGISDVEFT-----WGEGSFATIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIRGVDWTSPWGPAFYALSAPLLVCRVLFFAQVLPFQGPMIK----------------VIPRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTVKLLNLLVAILSTSHAEVQDNVKVEVKVSKARVVEHYQWVVDHHELPAPFNLLQLVLSVAVSSVVMLRWLVLVMPERIDTLEEGWEQT----KASCVRVRKAFGQFVFWLVLGLVAVSAGAVLWMVSGLPLFPYSQFAWYKQYKAEELKQQHNA-LWVGLRWWSICWRCFQILV--WCVVGAPVSLFVLWLAAFFVQVLSSCRHIPDEEYPST----VERLAIERMLLKGDAGKNADKLRQFLEDPMDDEYVRQDEKDRRATVEHIKLLRNRLEKTTKIELQHLNERL 2655 MRM+LD V Y+ MI AL V FHS E G +D + W E + A IFI GV++EG EM+ +Y +DQWN LD L+LL L+VGLV R VDW S GPAFYAL+APLLV R LFF Q+ P QGP+I+ V+ RMT LLKFGFVM V++ GF MAFHV FRDFDSFG +FL LF+AMLG+ DFF+ F+G YD VAT L VV LF+VTV LLNLLVAILSTSHA+V +N+ E KVS AR+++HYQ VV + LP PFNLLQLV V + W + R + +QT K + KA VFW+VLG VAV+ G++LWM S LP + + W K ++ + ++ + WS+ R + +++ WCV GAPV L +LWL A +VLS C D + + IE MLLK G A KLR+FL+DPMDD+ VRQDEKDRR TVEHIKLLRNRLE T+K +L+ L E L Sbjct: 1 MRMVLDLVVYIGMIVALSTFVLFHSQAEKSYVE-GSTDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTVGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPIIQASGEFRQVAKRNVSHSVVFRMTRILLKFGFVMAVILLGFIMAFHVQFRDFDSFGESFLDLFKAMLGDNDFFKVFSGDTYDFVATFLLVVGLFIVTVMLLNLLVAILSTSHAQVAENIDREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLV-------VWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIEPVVFWVVLGPVAVNGGSLLWMESVLP----AMYFWRKHHRLQNKRENGGGDSKKSMHLWSLFLR-YNVIIPCWCVFGAPVYLLLLWLNASG-RVLSRCPCNDDASSTAKSRHGASKSTIESMLLKSPGGVGAQKLREFLDDPMDDKDVRQDEKDRRTTVEHIKLLRNRLENTSKEQLKGLEEAL 507
BLAST of mRNA_E-siliculosus-1a_F_contig1077.540.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE) HSP 1 Score: 389 bits (1000), Expect = 5.100e-112 Identity = 282/786 (35.88%), Postives = 420/786 (53.44%), Query Frame = 1 Query: 463 DSGFKTLSFLMAGSARPSASDLKKLSKHHKSRDGFKNCCLRAVTSAANPFMPGLLLSIRLAEAAKEANEGEQRHIDEIRASVEALLLEIFERLPRTVRAFDEETNGGCTGMFEPQFLGGHQPLGFERPINMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDL-KCLGAGLVLGDGGDDVPRGCKNILARLSVLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGEDGISDVEFTWGEGSFATIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIR---GVDWTSPWGPAFYALSAPLLVCRVLFFAQVLPFQGPMIKVIPRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTVKLLNLLVAILSTSHAEVQDNVKVEVKVSKARVVEHYQWVVDHHELPAPFNLLQLVLSVAVSSVVMLRWLVLVMPERIDTLE-----------------EGWEQTKA--SCVRVRKAF-GQFVFWLVLGLVAVSAGAVLWMVSGLPLFPYSQFAWYKQYKAEELKQQHNALWVGLRWWSICWRCFQILVWCVVGAPVSLFVLWLAAFFVQVLSSCR--------------------------HIPDEEYPSTVERLAIER--------MLLKGDAGKNADKLRQFLEDPMDDEYVRQDEKDRRATVEHIKLLRNRLEKTTKIELQHLN 2646 D+ L++L+ A+P+ L +LS K K L A++SA NPF+PG+ LS+ A + A EGE+R + ++A+V+ LLLE+ E +P+TV+ F E C+ +FEP+ + G++ P++++LSK+EQM T+C +PLV+DF++R+F GLP L+DTEGVL +++ + L G +L +G K +++ A L ++ +FPGA+F++AG + P +YY+VPA+RM LD V Y++M+ G V H SD W E F T++I G+ E E+ +Y +DQWN+LD +L L G + R VD S A YALSAPL R+LFFAQ+LP QGPMI+V+ MT L KFG +M++VM GF +F+ L+++ ++G + +FRA LGE D+ + F+G +D VAT+L VVYL ++T+ +LNLLVA+LST+HA+V N +E KV++AR+++HY VV+ LP PFNL Q + ++ V+ L + P T G E+TK S +V + F G+ FW +LG +AV AG VLWM+S + W Q ++ A R ++ C VGAP V+W+ V + R I P+T+ E +L + D +L+ FL+DPM D VR+DE+ R TVEHIKLLRNRLE TTK +H+N Sbjct: 893 DARLSVLAYLLQQGAKPTNKGLLRLSNLVKF-PRLKESLLGAISSANNPFIPGMNLSVACTTATRRAMEGEKRRLASMQAAVDELLLEVLEHMPQTVKGFKGEMRD-CSAIFEPETVISRFH-GYQGPLHVVLSKREQMETYCTIPLVLDFMTRKFTKGLPSLRDTEGVLLSNKGFTQTLYGGGLLAEG--------KVFFFGMALQRGYAGGALSSITYFPGARFIIAGFLSRPGSYYKVPALRMCLDLVTYISMMIIFGGFVILHE-------AGDTSD----WLEIVF-TMYIFGGILTEFREILEDPWEYMRDQWNLLDVTSLTLLLGGAIQRMYGQVDDES--SRALYALSAPLAFARILFFAQILPSQGPMIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTAYGEVWKAIFRATLGETDYLDDFSGTTFDGVATVLLVVYLVLLTIMMLNLLVAVLSTAHAKVDANAGLEYKVTRARLIQHYVNVVEIDRLPPPFNLFQWIFALPFM-VLDLCFRTSRRPSTASTNSAXXXXXXXXXXXXXXSINGNEKTKRDRSYFKVARGFFGRLAFWAMLGPIAVLAGWVLWMIS---IVKAPVVVW--QTSGDKSLGGRIA------------RMLLVIFVCAVGAPFWHLVMWVRGGVAGVRRTMRALGCXXXXXXXXXXXXKRGDGRTTTASITARGSPATIVAEGAEDDMEKVVPIVLQEADGALTTSELQIFLDDPMSDPDVRRDEETRATTVEHIKLLRNRLEATTK---EHMN 1632
BLAST of mRNA_E-siliculosus-1a_F_contig1077.540.1 vs. uniprot
Match: D8LT30_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT30_ECTSI) HSP 1 Score: 324 bits (830), Expect = 3.970e-90 Identity = 245/748 (32.75%), Postives = 371/748 (49.60%), Query Frame = 1 Query: 463 DSGFKTLSFLMAGSARPSASDLKKLSKHHKSRDGFKNCCLRAVTSAANPFMPGLLLSIRLAEAAKEANEGEQRHIDEIRASVEALLLEIFERLPRTVRAFDEETNGGCTGMFEPQFLGGHQPLGFERPINMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGDGGDDVPRGCKNILARLSVLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGEDGISDVEFTWGEGSFATIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIR---GVDWTSPWGPAFYALSAPLLVCRVLFFAQVLPFQGPMIKVIPRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTVKLLNLLVAILSTSHAEVQDNVKVEVKVSKARVVEHYQWVVDHHELPAPFNLLQLVLSVAVSSVVMLRWLVLVMPERIDTLEEGWEQTKASCVRVRKAFGQFVFWLVLGLVAVSAGAVLWMVSGLPLFPYSQFAWYKQYKAEELKQQHNALWV-----GLRWWSICWRCFQILVWCV------------VGAPVSLFVLWLAAF-FVQVLSSCRHIPDEEYPSTVERLAIERMLLKGDAGKNADKLRQFLEDPMDDEYVRQDEKDRRATVEHIKLLRNRLEKTTKIELQHL 2643 D+ L++L+ A+P+ L +L K K L A++SA NPF+PG+ LS+ A + A EGE+R + ++A+++ LLLE+ E +P+TV+ F E C+ +FEP+ + G++ P++++LSK++QM T+C +PLV+DF+SR+F GLP L+DTEGVL N+ G L GD + + +++ A L ++ +FPGA+F++AG+ + P +YY+VPA+RM LD V Y+ M+ G V H + F W E F T++I G+ E E+ +Y +DQWN+LD +L L G++ R VD S A YALSAPL R+LFF Q+LP QGP+I+V+ MT L KFG +M++VM GF +F+ L+++ ++G+ + +FRA LGE D+F+ F+G +D VAT L VVYL ++T+ +LNLLVA+LST+HA+V + +E K AP + W QT K+ G + ++L + A + GA W H +WV G+R R + L C VG + + F V H ++ P ++ + D +L+ FL+DPM D VR+DE+ R TVEHIKLLRNRLE TTK + L Sbjct: 645 DARLSVLAYLLQHGAKPTNKGLLRLCNLVKF-PRLKESLLGAISSADNPFIPGMNLSVACTMATRRAMEGEKRRLASMQAAIDELLLEVLEHMPQTVKGFKGEMRD-CSAIFEPETVISRFH-GYQGPLHVVLSKRQQMETYCTIPLVLDFMSRKFTKGLPSLRDTEGVLLNNTSFTEPGQTLY----GDGLLAEGRVFFFGMALQRSYAGGTLSSITYFPGARFIIAGLLSRPGSYYKVPALRMCLDLVTYILMMIIFGGFVILHD-----------AGDTFDWMEIVF-TMYIFGGILTEFREILDDPWEYMRDQWNLLDVASLTLLLGGVIQRMYGQVDDQS--SRALYALSAPLAFARILFFVQILPSQGPIIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTTYGVVWKAIFRATLGETDYFDDFSGTTFDGVATALLVVYLVLLTIMMLNLLVAVLSTAHAKVDADAGLEYK--------------------APVVV----------------W-----------------QTSGD-----KSRGGRIARMLLVIFACAVGAPFW---------------------------HLVMWVRGGVAGVR------RTMRALGCCXXXXXXXXGGAKRVGGRTPTASMTVRGFPATTVAEGAEHDMEKVVPIVLQ---------EADGALATSELQIFLDDPMSDPAVRRDEETRATTVEHIKLLRNRLEATTKEHMDGL 1271
BLAST of mRNA_E-siliculosus-1a_F_contig1077.540.1 vs. uniprot
Match: A0A6H5JCX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX0_9PHAE) HSP 1 Score: 294 bits (752), Expect = 3.380e-84 Identity = 250/741 (33.74%), Postives = 349/741 (47.10%), Query Frame = 1 Query: 481 LSFLMAGSARPSASDLKKLSKHHKSRDGFKNCCLRAVTSAANPFMPGLLLSIRLAEAAKEANEGEQRHIDEIRASVEALLLEIFERLPRTVRAFDEETNGG---CTGMFEPQFLGGH-QPLGFERPINMIL-SKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCL-GAG-----LVLGDGGDD----------------VPRGCKNILARLSVLLQAAQDDLPNLAFFPGAQFVVAGVAADPSTYYRVPAMRMLLDFVAYVAMIAALGYLVFFHSPTGGVLGEDGISDVEFTWGEGSFATIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIRGVDWTSPWGPAFYALSAPLLVCRVLFFAQVLPFQGPMIKVIPRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTVKLLNLLVAILSTSHAEVQDNVKVEVKVSKARVVEHYQWVVDHHELPAPFNLLQLVLSVAVSSVVMLRWLVLVMPE-RIDTLEEGWEQTKASCVRVRKAFGQFVFWLVLGLVAVSAGAVLWMVSGLPLFPYSQFAWYKQYKAEELKQQHNALWVGLRWWSICWRCFQILVWCVVGAPVSLFVLWLAAFFVQVLSSCRHIPDE-EYPSTVERLAIERMLLKGDAGKNADKLRQFLEDPMDDEYVRQDEKDRRATVEHIKLLRNRLEK 2616 ++ L+ A PS DL LS+ H S + +CCLR V ++ N F+ G+ LS+ + K+A EGE+ ++ I+ V ALLLEI ERLP+TV F NGG C+ + P+F + GF+ P+ ++L + Q TFC+ PL+MD+LSR+F GLPD+ D +GVLRN + L G+G LV+G G D+ V G K LLQ A D L +L F PGAQF +AG A P+ YYR+PA+RM+LD V Y+ +I AL LVF S G + RG +G VI MT L++FG VM+VVM GFAM+ HVL RD SFG TF+ LF+A LG+VD+F SV LNLLVAIL+ SH++VQ+NV+ E KVSKAR+++ +W V++ LPAPFN+ QL+ S + LVMP R +E ++A GQ V W VLGL+A G++LW++S + Y+ F W++ Y +VGL + I++ G+ + ++ V++ S P + ST + ML D G KLR+FL DPM++ VR+ R TVEH+KLLR+RL K Sbjct: 20 IALLLKNYACPSPEDLIDLSRKHPSDERLHDCCLRVVAASDNLFISGMTLSVARVDVTKKAPEGERGTLEAIQGHVHALLLEILERLPQTVNGF----NGGMADCSAVLGPEFDSKTGESTGFKPPLALLLLANSIQTETFCSTPLIMDYLSRKFTHGLPDVGDKDGVLRNGTEHDVLSGSGPGMMSLVIGGGDDEELDERGYHEFRHKDLLVKNGLKASFESPRALLQGANDRLASLTFLPGAQFAIAGFLAKPNNYYRIPAVRMVLDVVVYLLVIIALSILVFRDS----------------------------------------------------------------GSLTRG--------------------------------EGIAAAVIFAMTAQLVRFGIVMLVVMVGFAMSLHVLIRDSKSFGETFVALFKATLGDVDYFTA------SSV----------------LNLLVAILTVSHSKVQENVQREFKVSKARMIQRCRWTVENDWLPAPFNVAQLLFSGQYA---------LVMPSFRRKRYDEA-----------KQAIGQAVSWFVLGLMAFVGGSILWILSVV----YALFVWHEHY------------YVGLDTHT----AHVIILQTEPGSNDT--AVYPYPCVVRLGCSVVSFPARGQDASTRASSGGDGMLKSADQGVGMAKLREFLADPMNNRDVRKAGTTRSTTVEHLKLLRDRLVK 596 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1077.540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1077.540.1 >prot_E-siliculosus-1a_F_contig1077.540.1 ID=prot_E-siliculosus-1a_F_contig1077.540.1|Name=mRNA_E-siliculosus-1a_F_contig1077.540.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=919bp MLTATDRLGNTILTAAVSSKSVGTFEAVFNAAKRYLHRGQFAKMLSAKDQback to top mRNA from alignment at E-siliculosus-1a_F_contig1077:20837..27722+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1077.540.1 ID=mRNA_E-siliculosus-1a_F_contig1077.540.1|Name=mRNA_E-siliculosus-1a_F_contig1077.540.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6886bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1077:20837..27722+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1077:20837..27722+ >mRNA_E-siliculosus-1a_F_contig1077.540.1 ID=mRNA_E-siliculosus-1a_F_contig1077.540.1|Name=mRNA_E-siliculosus-1a_F_contig1077.540.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5514bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1077:20837..27722+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |