Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 0 |
| Cds size | 342 |
| Model size | 344 |
| Exons | 3 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1077.539.1 >prot_E-siliculosus-1a_F_contig1077.539.1 ID=prot_E-siliculosus-1a_F_contig1077.539.1|Name=mRNA_E-siliculosus-1a_F_contig1077.539.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=114bp
HYTSDCTGSRRTHCADDHLQPVAQWNTGDEKENRSSDNDQAEDFLPSHDT
LTMHIREAVAMGNWREVQTLMAGASETDRNAVLRAPYGGARSGLHDGTTP
LLHAARCKGPETFE back to topmRNA from alignment at E-siliculosus-1a_F_contig1077:12641..19339+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1077.539.1 ID=mRNA_E-siliculosus-1a_F_contig1077.539.1|Name=mRNA_E-siliculosus-1a_F_contig1077.539.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6699bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1077:12641..19339+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CACTACACTAGCGACTGCACCGGGTCACGACGAACTCATTGCGCGGACGA
CCATCTACAACCTGTCGGTGAGGAACACAAGAGCAACAACATTTCGGCAT
GTGTCACTCCCGAGAACGCAACCGGCTCGATCGTGGATGCCCCTTGCAGC
AACAGCGACAAATCAATGGCATTTACAAGCTCGTGGGAATCGCACCAAGA
GCCCGCCCCACAAATAGGCCGGCCTCCTCGATCGAGCTCGTCTACCGCAC
ACGTCCACCGTGGATTGGGCAGGGTAGGCGCAAGTGATACTGCAGTTCTC
AACAGTGCGGTCGACGGGAGTGATGGTGGTGGCGTCTTATCTGGGTTGGA
GGCCCGTATGCCCGGTGCATGTTCCACACCGCCGGAGTTGAGACAGGTAG
ATGGGGTTCCAGAGGAGGCCGAGGATGACATTGTTGCCGCAGCAGACTGG
TTGGATGTTCATGACATGTTGGCTGCACTTGGTAGCAAGAGTCTGGAGCT
TTGACTTTCGCTACATAATTTGGTTGCTTGTGCCAACCTTTGATGCAGGT
TACGGATATTGAGTGTGTATGACAGCGGTGTTTTGAACGTGGGATATTTG
ACCTTGTTGGTAGAACAACCGTACACATCATGTTTGTTTGGCACAAAACG
GGACGCCTAAAAAACGCCACAGTGGTTGAAACCCAAGAGGCGGTCCCGCT
CCGACAAAAAGGACACGAAGAAACGCCGCAGACGGTCATGCCCGCGAAGC
AGCCCCGCAAACCAAAGGGCCATGTGAAATAAGTCCTCGGTAGTCCAGCG
AAAGGTAAAAGTAACGGTTGTGGTTCGCCGGTGTCCGTAGTTTGTTATTG
TTGAGGCAAAATCGGACAATTCAGGGTCTTGTGCTCCTCACCTTCCCTCT
CTGCCAGCTAGACCCAGCTTCATCTGCTTTGTAGTGTCGGAAACATATAT
ATGTATGTGTCATCACGTGTGCTGCTGCCTAGATCCACACGTCGTCCACC
GAGTACTTCAGACACACGTACGATACGCGATATGGTGTATCGAGAGTTAT
CCCTGAAAAGAAGGGGGAGCAGGAGATCTGCGCGCTTGAAACCAGCGAAC
TTTTGTCGTTGTTCTTTCGCGGAAACTCTGCGAACACGCTGTAGGTCATG
CGTCCAATCTCCCACGCTACCGACAGTTTTGTCAAGTGCCCCATGGGGCA
CCGATGGACTGCCCATGGGTGCCCCATGGGTGCCCCATGGGGCGCCCATG
GGGCCGCCCATGAGCTGCCCATGGGTAGTCCATGAAGTGCCCATCATGGG
CTGCCCATGAGCATGCTCATCATGGACGGGCTGCCCATGGGCAGCCTATG
GGCAATGGGCCGCCCATGGGCAGCCCATGATTTTGACAAAACTGGCGGCC
GATTCAGTGAATTTTTGACAGTTTCGTTCTTTCTGGCGGCCGATTCCTCT
CCAGCGCCCTCTCCCTGTTCCGCATTCCGAGCACGCGGCTGAGCCGCATG
CTCGCCCAGTCGCGGCCGCTAGGCCGTGCTTTGGCCGTGGGTAGGGGTTA
GGGTTAGGGTTAGGGTTAGGGTAGACCTAGCCTTGCTCGCGTGAAGAACC
TAGCCTTGCTACGTTCAACATCGGTTAGTCCTAAAGAGTTCTACCAATGT
GTAACCAAGGCTCCCACGATGGGCTGCCCATCCACGGTAAGCTGCCCATG
AGCTGCATGAGCTGCCCACGGTGGGTTGCCCATGGTGGACCGCTCATGGG
CAGCCCACCGTGCCCACGGGCCGCCCGTCATGGGCATTTTGGGCATGCCC
ATGGGCATGCACACAAGCGACCCACGGGTGCCCCATGGGCCACCCATAGG
CGGCCCATGGGTCAGCCGTGGGCTTGCTCATGGGCATGCCCATGGGGCGC
CCATTCGGCACCCATGGGTCACCCATGAGCCTTTTGTTGCCCATGGGTGC
CCCATGGGGCAGCCATGGGCGGCCTATGGGGCACCCATGGGCCGTTTGGG
AAAAATTAAGTGTGTTCGAGACCCCATACGTCGGGCTTCTATGAAAGTCC
AGGGTCGTTTTATTGGGTTTCCTTGTACCCCACCACAACAGAGCCTAGCA
GGGGTACAAGCAAACAACTTCAGGCGCTTGTTATTTTTTTCCCTTCGGTC
ATCGTTGATTTATATATATGTTAGATCTGCTCTTGTTCGCGTGTCGAGCG
GGAGCAATGGGCTCTCTTTCTTTTTACTAATTTTTTTGTTTCTTGTATTG
CCTACGCGCCCGTGCCCCGGGTTATTTGTTGCGATCTGCTGTGTATGGAG
ATTGTTTCAATATTTCCTGAGGCCTTTGTTATTTATTTCTGTTTTGAGAT
ATTCAAGTATGCTGTACCTTTGCGGTAGCTTGTATGCATAGACTAATCCT
GCAGAAAAATGTTCTTTGTCGGCTCTCGTGTTGCTTATAGATGCCGTGCA
GTCTGCCTCGCGAATTGCTCAAAGCCACGCCTGTTGGGTCTTCGAGAAAG
TTCTATGTAGCTGTCATCTGATGGCGCAGGTCATCATCTGTTTTGGCACA
GGGCCGACGTAATTTTGTCGTCATTCGAGGAAGTCTTGCAAAGATCAATT
CCCCCGCAAGATTCCACGGACTCCGCGGAAAATCATTTTTTTTTTTTTGA
GATAATCTTCGCCGAACAGCTACCGTCGGACGGATCTTCTCGCATAATAT
TGCTTCAGCGACGAAAATCACCACTGGAACCTATCAAAACAAAAGTAGTT
ATTGGCGCTCTGCAGACACATCGGATCATCATCGATGATCCCACTTTTCT
CGAAAATGAACATGTACTGAAGTTCGGAGTCATTTAGTTCGTGAGGCAAA
CTGAAAAGAAAGGTATTCGGCGAATGAAAATCGAAATTAATTGTATTTTT
CGCCGTCGTTGTCGGTACATTTTTCCGCGCCGCGTCCATCTCGGCCACAT
CCACCAGTGCAGACCCTACTACTCTCTTTCTCTCTTCTCCTCGCAGAGAG
GTGCAGAGTTTTTTCGGCTCGAAACGTGCGCCGCACTACAGTCCCGCTGC
GTGTGTCTGTCTGTGCTTTGTGGGCGAGCGTACAACTATGAGAGGTATGT
GTGTGCAGATGCGAGGGAGAAGAGTGTTGTTGTCTTCACAATACAAAACC
GTTCTGATGGCTCCGTCCAGTACCTACCTTCGTCGTTCGAATCTACAGAG
TAACATCCTACGCGGTCCGTGGTCATGTAGCTATTGAACGGTAACAGACG
AACCGGTAGTTTGTACGGAGGAGCGCAATTGCGACTCTCTCGGAATTGTG
ATACTCCCATGTCGTGGACGCTGGCTCACGTTCGCGTGGTGCGGGGTTGG
TTCCAAGGTGTAACGAGTTCTTCGGCGTTTTCGACAACCTGATTTTCGAT
TTGTACGCATAGTATAATGTGTAGATGGTGCGCACATGTGCATATGCGCA
TGTTATTTTTCCGCGCCGGGCCGACAATACATGCATATGATCTATGTTTT
TCGGGAGAACTTCCTCGCCCCTCTTTGTACATGGATGGATGTCGGTGGGA
TTTCTCGACATACGCAGGCACCACGTAGGACGGCCGGCGTGCTAGTTAGG
AGACACACCACTCGGCCACGAGAACAGAGCAAAAACAGATGATAAACACT
GCCTGGAGGCCGGGAGCAATAAATCAAAAACCGAAAAAACAACGGAAATA
AACCAACCGAAACAAATGGTTGCACCAGCTCTCAGCAGAGTATGCGTTAT
GACGTCTGACGCGCTCCGGAAAAAGATGTTACACCTATAATGTAAAAGGC
AACTCAACAACACCCTGTGTGAACAGCGTACACAAGCACTACACCGTTGG
CCAATTGGCTTCCTCACTGGTTCCCTTCTTTCGAGGTCGTTTGTTTTTTC
CTCCCGTTGGACAACTTATAGACTAATCGACGACGTGAACAACTACAAGA
AGTGATTGGCTGCGGATGCAAATCCCTACAGCCAGTCGACCGGGATTGCT
CTGTTGTCTGAAAAAAGAACCCCGGCGGGGGGCTTGTACGCTATTGTCCC
AGGTATCCATCCCAGTTCTCGACCTTTTTCATTATAATCCCCCAAGTACC
TCCAGTGCCCACTCATATTTCACATCAGTCGATTCCTGGTCATTCCTACA
TACACCCATCATATTCCGTCCAGAATGTAGCAAAAGTGTTGTTGATCATC
GCACCACCTCCTCAGCGGTTTTCTCCCAGCTCTATATGAATCCAGAGGGA
GATCGATGTCGACACGTTGATGAAAATCCCTCACTGTCCTGCAATACCCG
AAGAGAATGCCATGCACACGTAGATCTACAAGAAACTCTGCACAATCACC
ATCCGTCCTCGAAAACACTGAAGTATTCGTGGGTCGTTGGTAACTTCTCA
ATCTATCAAAGTATGACGTTGGATTTTGAAAATTGCTCATCAATCTCACA
AACGGATTCATCACATCTCACATATGTGTACTGTACATCTCTCCAGGTTC
CAACGCTGGATCGAGTTTGCTTCAAAACTTTGAACACCATCCATTGGTCC
GTTCGGGATCAGTCGGTATGTTTATAGAAGAAGCGTTGCCTTCGTGCTGG
GGTGTTTTCGCCATCGACAAAGTAAGTTGCCCTTGGAATTCTCCGATACC
ATTCACTATCTCGTCGACCGAAACGTCACCACCTTGATAATAGCAGGTTT
CCGCCGGACGAATCGCCCTTTGAGTTTCGACGCCAACAGATATTCAACCC
GCCGGACACATCGGCTCATCGTTTTAATTGTTTCAACACGCAAAGTTAAA
TACCTCTAGACTATACAGTATATCTGCAAGTGCTACGTGTGTTTCGGGTC
TCCCACACTTTTTACAGTTTTCCCAAACGACCCATGGGCCGCCCATGGGC
ACCCCGTTAAGCCCATGGGCGGCCAATGAGAGCCCTTCAATCGAACCAGT
GTACTCCAAGACAGTAGATTGTCTGCTTTGTTTCGAACATGCACATAGCG
GCTAGTAACCCTAACGCTAACCGCAACTATATCCCCAAACCCACACGATA
TGTGCTAGGTTGGCGCTGGTGGCTATGTTGTAGGTTGGGTTAGACGGTGG
TTAAGTTCTAGGTTGATATGCCGGTGGCGAAGTTCTAGGTTGAAGTGCCC
ATGGGCGGCCCATGGGTGACCCATGGGTGTCCCATGGGCGGTTTGACACA
ACTGTCCGTAGTACATTTCACATTGATTGGCACCTCGAACCATGGGATTT
CGCGTGAGACTTCCCTCTGGGACGCCTGATTCGCTCCCCCCAGAGGTTTG
TTTCCCTTCCCGCTTCCCTCAGCCTCGCGTTGCTGCGCACGTCACCATTA
CGTTCATTTGTTTGTATTCGCCTGACTGTGTACGGCCGGCACCAGTATTG
GCTACTACTGGAAGACCCACATAATGGTGCAAATGCACAGGTGGTTCTCT
CAGGGCCCCTGCTCCCATTGCGTTAGAGGTTCAAACGAACAACCAGCAAG
CGCGTGGCCTGGTCACAGACGGCATTGCTGAAGATGGAGGTACGCGACCG
TCCGTCGAATACCGAGGGAACGGGGCGTGTGTATCTGCCGTCAAATGACC
TTGACCTACATTTAATGCAAACATATCAAATGCCACCGCTGACGGAAGAT
ATTCTTCGTCGTCGCCATGAAAAAGTAACCCGTACGACGTAGGCAGAAAA
CGCCGTCAATACGTGACTGGTAATTCAGTATGTATAGTGATCATCTCAGC
CGCTCATATGGCGAGCGTGTGCATACTATATCTACCCTGTGCACTACTGC
GCGATTCCTTCTTACTCGATCCATTCCATTCGTCGGGCGCTCCCCCTCCC
TCGATAGCCCAGTGGAACACCGGCGACGAAAAAGAGAACCGCAGTTCCGA
CAACGACCAGGCCGAAGACTTCCTTCCCTCACATGGTACGTACAATATTA
GGGTGGAAAGCGTGGCTTAATTTTAGCAGAGCACGTGATAAGTGGCCAAT
GGTACAGAGAATAGTACCGAGCGGTGTCCGCATTAGCCTTTGGTGATACG
TCACCCTTTACTAAGATGGAACAGTCAAGTCATCCCTACAGTGCTCTCCG
GCCTTACCACGCCGCTTCACAACTAAAGAGTACCAGAAGGAGAATTGTGA
GCACGGCAACGACCCTACATGGCCGACACAGAGCATCCAGGACACGTTCG
CTCATTCATTCCACAGCTGTCTCCAAAGGGCACATGCATCCCGAGAACTT
GCGGAATTACTCTGTGCGCAAGACGATTCTGGGTTCAGGCATCCCACGCT
GGATGGACTAAATGTAGGTTGGACGCTGTGCTGCCAGAGACATTGCAGAG
GCAATTTGCATGCTACGCCGCCACACCTCCGCGCTTTGTGCCCGTCTCTC
CTCTCGAGCCCCCAGCGTATAGATTAGGCCTTTACTGCTCACGACTGCAA
CGCCTGCTAAAACTCGCCCCCCCGCGACAATGTATTGTCCAAATTTGCAG
ACACTCTGACGATGCATATTCGTGAAGCAGTAGCCATGGGAAATTGGAGG
GAAGTCCAAACTTTGATGGCTGGGGCAAGCGAGACGGACAGAAATGCTGT
TCTCCGGGCACCGTACGGTGGAGCACGAAGCGGCCTTCACGATGGAACCA
CTCCGCTCCTGCACGCAGCAAGATGCAAAGGACCGGAGACGTTTGAGGA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1077:12641..19339+ >mRNA_E-siliculosus-1a_F_contig1077.539.1 ID=mRNA_E-siliculosus-1a_F_contig1077.539.1|Name=mRNA_E-siliculosus-1a_F_contig1077.539.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=684bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1077:12641..19339+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CACTACACTAGCGACTGCACCGGGTCACGACGAACTCATTGCGCGGACGA
CCATCTACAACCTGTCGCACTACACTAGCGACTGCACCGGGTCACGACGA
ACTCATTGCGCGGACGACCATCTACAACCTGTCGCCCAGTGGAACACCGG
CGACGAAAAAGAGAACCGCAGTTCCGACAACGACCAGGCCGAAGACTTCC
TTCCCTCACATGCCCAGTGGAACACCGGCGACGAAAAAGAGAACCGCAGT
TCCGACAACGACCAGGCCGAAGACTTCCTTCCCTCACATGACACTCTGAC
GATGCATATTCGTGAAGCAGTAGCCATGGGAAATTGGAGGGAAGTCCAAA
CTTTGATGGCTGGGGCAAGCGAGACGGACAGAAATGCTGTTCTCCGGGCA
CCGTACGGTGGAGCACGAAGCGGCCTTCACGATGGAACCACTCCGCTCCT
GCACGCAGCAAGATGCAAAGGACCGGAGACGTTTGAGACACTCTGACGAT
GCATATTCGTGAAGCAGTAGCCATGGGAAATTGGAGGGAAGTCCAAACTT
TGATGGCTGGGGCAAGCGAGACGGACAGAAATGCTGTTCTCCGGGCACCG
TACGGTGGAGCACGAAGCGGCCTTCACGATGGAACCACTCCGCTCCTGCA
CGCAGCAAGATGCAAAGGACCGGAGACGTTTGAG back to top
|