mRNA_E-siliculosus-1a_F_contig10754.530.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig10754.530.1
Unique Name	mRNA_E-siliculosus-1a_F_contig10754.530.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig10754.530.1 vs. uniprot
Match: D7G3U3_ECTSI (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U3_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 4.520e-70
Identity = 101/106 (95.28%), Postives = 103/106 (97.17%), Query Frame = 1

Query:    1 QSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGELRALLGCASDSASRPQVGKEALPSGLG 318
            +SLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGELRAL  CA+D ASRPQVGKEALPSGLG
Sbjct:   81 ESLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGELRALPDCAADFASRPQVGKEALPSGLG 186

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BLAST of mRNA_E-siliculosus-1a_F_contig10754.530.1 vs. uniprot
Match: A0A067CLJ4_SAPPC (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CLJ4_SAPPC)

HSP 1 Score: 149 bits (375), Expect = 5.760e-40
Identity = 66/81 (81.48%), Postives = 73/81 (90.12%), Query Frame = 1

Query:    1 QSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGELR 243
            QSLDVDYVLVIFGG+TGYSSDDINKFLWPVRIGSGVFP+DM  E+DF + +G FDVGP GSK+  NCLAYKLCYYRFGE+R
Sbjct:  332 QSLDVDYVLVIFGGLTGYSSDDINKFLWPVRIGSGVFPNDMPAERDFYSASGNFDVGPGGSKILHNCLAYKLCYYRFGEMR 412

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BLAST of mRNA_E-siliculosus-1a_F_contig10754.530.1 vs. uniprot
Match: A0A1V9Z2X8_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z2X8_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.290e-39
Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 1

Query:    1 QSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGELR 243
            QSLDVDYVLVIFGG+TGYSSDDINKFLWPVRIGSGVFP+DM  E+DF + +G FDVGP GSKV  NCLAYKLCYYRFGE+R
Sbjct:  616 QSLDVDYVLVIFGGLTGYSSDDINKFLWPVRIGSGVFPNDMPAERDFYSASGNFDVGPGGSKVLHNCLAYKLCYYRFGEMR 696

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BLAST of mRNA_E-siliculosus-1a_F_contig10754.530.1 vs. uniprot
Match: A0A7S2XVF7_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVF7_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.830e-39
Identity = 63/81 (77.78%), Postives = 74/81 (91.36%), Query Frame = 1

Query:    1 QSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGELR 243
            +SLDVDYVLVIFGG+TGYSSDDINKFLWPVRIGSGV+P+DM +E DFLN  G FDVGP+ S+ F+NC+AYKLCYYRFGE++
Sbjct:  161 ESLDVDYVLVIFGGLTGYSSDDINKFLWPVRIGSGVYPNDMPNENDFLNDQGSFDVGPSASETFKNCVAYKLCYYRFGEVQ 241

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BLAST of mRNA_E-siliculosus-1a_F_contig10754.530.1 vs. uniprot
Match: W2HBT5_PHYPR (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2HBT5_PHYPR)

HSP 1 Score: 148 bits (373), Expect = 3.290e-39
Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 1

Query:    1 QSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGEL 240
            QSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGV+PDDM  E+D+ + +G FDVGP GSKV  NCLAYKLCYYRFGE+
Sbjct:  613 QSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVYPDDMPSERDYYSTSGNFDVGPGGSKVLHNCLAYKLCYYRFGEV 692

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BLAST of mRNA_E-siliculosus-1a_F_contig10754.530.1 vs. uniprot
Match: A0A8K1C594_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C594_PYTOL)

HSP 1 Score: 145 bits (365), Expect = 3.990e-38
Identity = 65/80 (81.25%), Postives = 71/80 (88.75%), Query Frame = 1

Query:    1 QSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGEL 240
            QSLDVDYVLVIFGG+TGYSSDDINKFLWPVRIGSGV+PDDM  E+DF + +G FDVG  GSKV  NCLAYKLCYYRFGE+
Sbjct:  615 QSLDVDYVLVIFGGLTGYSSDDINKFLWPVRIGSGVYPDDMPSERDFYSASGNFDVGAGGSKVLHNCLAYKLCYYRFGEV 694

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BLAST of mRNA_E-siliculosus-1a_F_contig10754.530.1 vs. uniprot
Match: A0A3M6VAL3_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAL3_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.380e-37
Identity = 63/80 (78.75%), Postives = 71/80 (88.75%), Query Frame = 1

Query:    1 QSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGEL 240
            QSLDVDYVLVIFGGV+GYSSDDINKFLWPVRIGSGV+P+DM  E+DF + +G FD+GP GSK   NCLAYKLCYYRFGE+
Sbjct:  613 QSLDVDYVLVIFGGVSGYSSDDINKFLWPVRIGSGVYPNDMPSERDFYSASGNFDIGPGGSKFLHNCLAYKLCYYRFGEV 692

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BLAST of mRNA_E-siliculosus-1a_F_contig10754.530.1 vs. uniprot
Match: A0A484E0M2_BRELC (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0M2_BRELC)

HSP 1 Score: 143 bits (360), Expect = 1.890e-37
Identity = 62/80 (77.50%), Postives = 71/80 (88.75%), Query Frame = 1

Query:    1 QSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGEL 240
            QSLDVDYVLVIFGGVTGY SDDINKFLWPVRIGSGV+P+DM  E+D+ + +G FD+GP GSK+  NCLAYKLCYYRFGE+
Sbjct:  611 QSLDVDYVLVIFGGVTGYGSDDINKFLWPVRIGSGVYPNDMPAERDYYSVSGSFDIGPGGSKILHNCLAYKLCYYRFGEV 690

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BLAST of mRNA_E-siliculosus-1a_F_contig10754.530.1 vs. uniprot
Match: K3WH73_GLOUD (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WH73_GLOUD)

HSP 1 Score: 143 bits (360), Expect = 1.900e-37
Identity = 64/80 (80.00%), Postives = 71/80 (88.75%), Query Frame = 1

Query:    1 QSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGEL 240
            QSLDVDYVLVIFGG+TGYSSDDINKFLWPVRIGSGV+P+DM  E+DF + +G FDVG  GSKV  NCLAYKLCYYRFGE+
Sbjct:  621 QSLDVDYVLVIFGGLTGYSSDDINKFLWPVRIGSGVYPNDMPSERDFYSKSGNFDVGAGGSKVLHNCLAYKLCYYRFGEV 700

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BLAST of mRNA_E-siliculosus-1a_F_contig10754.530.1 vs. uniprot
Match: I2CR01_NANGC (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CR01_NANGC)

HSP 1 Score: 143 bits (360), Expect = 1.900e-37
Identity = 66/79 (83.54%), Postives = 72/79 (91.14%), Query Frame = 1

Query:    1 QSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGE 237
            +SLDVDYVLVIFGG+TGYSSDDINKFLWPVRIGSGVFP+DM +EKDF + +G FDVGP GSKV  NCLAYKLCYYRFGE
Sbjct:  625 ESLDVDYVLVIFGGLTGYSSDDINKFLWPVRIGSGVFPNDMPNEKDFFSDSG-FDVGPQGSKVLHNCLAYKLCYYRFGE 702

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig10754.530.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig10754.530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
D7G3U3_ECTSI	4.520e-70	95.28	Dolichyl-diphosphooligosaccharide--protein glycotr...	[more]
A0A067CLJ4_SAPPC	5.760e-40	81.48	Dolichyl-diphosphooligosaccharide--protein glycotr...	[more]
A0A1V9Z2X8_9STRA	1.290e-39	82.72	Dolichyl-diphosphooligosaccharide--protein glycotr...	[more]
A0A7S2XVF7_9STRA	2.830e-39	77.78	Dolichyl-diphosphooligosaccharide--protein glycotr...	[more]
W2HBT5_PHYPR	3.290e-39	82.50	Dolichyl-diphosphooligosaccharide--protein glycotr...	[more]
A0A8K1C594_PYTOL	3.990e-38	81.25	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A3M6VAL3_9STRA	1.380e-37	78.75	Dolichyl-diphosphooligosaccharide--protein glycotr...	[more]
A0A484E0M2_BRELC	1.890e-37	77.50	Dolichyl-diphosphooligosaccharide--protein glycotr...	[more]
K3WH73_GLOUD	1.900e-37	80.00	Dolichyl-diphosphooligosaccharide--protein glycotr...	[more]
I2CR01_NANGC	1.900e-37	83.54	Dolichyl-diphosphooligosaccharide--protein glycotr...	[more]

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Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig10754:136..1304+
coding sequence from alignment at E-siliculosus-1a_F_contig10754:136..1304+

protein sequence of mRNA_E-siliculosus-1a_F_contig10754.530.1

>prot_E-siliculosus-1a_F_contig10754.530.1 ID=prot_E-siliculosus-1a_F_contig10754.530.1|Name=mRNA_E-siliculosus-1a_F_contig10754.530.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=106bp
QSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNP
TGQFDVGPAGSKVFQNCLAYKLCYYRFGELRALLGCASDSASRPQVGKEA
LPSGLG

mRNA from alignment at E-siliculosus-1a_F_contig10754:136..1304+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig10754.530.1 ID=mRNA_E-siliculosus-1a_F_contig10754.530.1|Name=mRNA_E-siliculosus-1a_F_contig10754.530.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1169bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10754:136..1304+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CAGTCCCTGGACGTGGACTACGTTCTCGTGATCTTCGGGGGAGTGACGGG
TTACTCTAGCGACGACATCAACAAGTTCTTGTGGCCCGTGCGGATCGGAA
GCGGCGTTTTCCCCGACGACATGCACCACGAGAAGGTAGGTGCCTTTTAA
GTAAGGCATGCGGATTGAAATGGTTTGCGGTACCGAAATGGTATTTTTTA
CGGTGCGGTGCAACACGGAATGCATCACGGGAAGGAGCCTTGGTACAAGG
CATGCGGCATAAAATGATTTGTGGTAACCTTACAAAACGGCGTTATTGTT
TGTACCACACGGAATGCATCATGGGAAGGTGCCTTGGTACAAGGTATGAT
GCATAAAATGATTCGTGGCACGCTACGAGCCGGTACGGTGTGACCACGGT
ACGGAACAGCACGGTGGCGAGGGAATTTCGTAGCACGCCTTGCGGGACGC
TACGGCATACACACCTCGATGACGAAGTGCCAGTTACACCCTGAAACAAC
AAGCGAGATCCACATCTAGCGCCGAAATTTGTGGTCCCTCGTTAACACGA
CGAACATCGCGGCCGGCCTCTCCATTCGACCGGCGATGTTTTGTTTTCTT
CTTCTTTTTTCACGCGGGATCAGGCCCTTGTGCGAAATCCCGCTCTCCCG
TTGTATTATACCCCCATCCGCCAAAGCTAGCTAGATAGCGCTGCGGATTG
TAGAAGGTCGTTCTTCCGGCGTTTGGGCTAACGCGTCCCTACAACCGTCT
GTCCCTCTTTTGTCGGGTGCTTTTTGTTTTTCCTTGGGGCAGGACTTCCT
CAATCCCACCGGGCAGTTCGACGTGGGCCCTGCCGGATCCAAGGTCTTCC
AGAACTGCCTGGCCTACAAGCTGTGCTACTACCGCTTTGGCGAGCTCCGG
GTGCGTCTCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGC
GCTTGCTTCGGGCGTTTCTTCAGACTTTGCTTTATGCCTTGCGTCAGGTT
TTGTGTCAGACTTTGCTTTAGACTTTAATTCAGGCTTTGCACCAGACTTG
CGCCAGACTTTGCGCCAGACTCTGCGCCAGACTTTGTGCGTCAGGCTCTG
CTAGGCTGTGCTTCAGACTCTGCGTCTCGCCCTCAAGTCGGGAAGGAGGC
TCTTCCAAGCGGTTTAGGT

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10754:136..1304+

>mRNA_E-siliculosus-1a_F_contig10754.530.1 ID=mRNA_E-siliculosus-1a_F_contig10754.530.1|Name=mRNA_E-siliculosus-1a_F_contig10754.530.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=636bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10754:136..1304+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CAGTCCCTGGACGTGGACTACGTTCTCGTGATCTTCGGGGGAGTGACGGG
TTACTCTAGCGACGACATCAACAAGTTCTTGTGGCCCGTGCGGATCGGAA
GCGGCGTTTTCCCCGACGACATGCACCACGAGAAGCAGTCCCTGGACGTG
GACTACGTTCTCGTGATCTTCGGGGGAGTGACGGGTTACTCTAGCGACGA
CATCAACAAGTTCTTGTGGCCCGTGCGGATCGGAAGCGGCGTTTTCCCCG
ACGACATGCACCACGAGAAGGACTTCCTCAATCCCACCGGGCAGTTCGAC
GTGGGCCCTGCCGGATCCAAGGTCTTCCAGAACTGCCTGGCCTACAAGCT
GTGCTACTACCGCTTTGGCGAGCTCCGGGACTTCCTCAATCCCACCGGGC
AGTTCGACGTGGGCCCTGCCGGATCCAAGGTCTTCCAGAACTGCCTGGCC
TACAAGCTGTGCTACTACCGCTTTGGCGAGCTCCGGGCTCTGCTAGGCTG
TGCTTCAGACTCTGCGTCTCGCCCTCAAGTCGGGAAGGAGGCTCTTCCAA
GCGGTTTAGGTGCTCTGCTAGGCTGTGCTTCAGACTCTGCGTCTCGCCCT
CAAGTCGGGAAGGAGGCTCTTCCAAGCGGTTTAGGT