mRNA_E-siliculosus-1a_F_contig1074.525.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: D7G0R2_ECTSI (Sister chromatid cohesion complex Cohesin, subunit STAG/IRR1/SCC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R2_ECTSI) HSP 1 Score: 785 bits (2028), Expect = 1.980e-279 Identity = 437/459 (95.21%), Postives = 442/459 (96.30%), Query Frame = 2 Query: 575 SAPPAPSGKTVSRGAKNTGGXXXXXXXXXXXXIPTSRKAATTSAAQADGEESEXXXXXXXXXXXXXXXXXXXXENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSNGFLESIERADEMDIEAGIFEEGLGLPARTECMGFFVDGIQ 1951
SAPPAPSGK+ SRGAKNTG XXXXXXXXXXXXIPTSRKAATTSAA+ADGEESE XXXXXXXXX ENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPP+DVSVIEMDGEQW ELLKVVIEDMQGQPGTKG PSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGL EKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVER+FSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVD+ VAREAGVALRLMLSNGFLESIERADEMDIEAGIFEEGLGLPARTECMGFFVDGIQ
Sbjct: 134 SAPPAPSGKSASRGAKNTGXXXXXXXXXXXXXIPTSRKAATTSAAEADGEESEGEDGNALGXXXXXXXXXRGAENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPSDVSVIEMDGEQWVELLKVVIEDMQGQPGTKGAPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLREKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERVFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDSAVAREAGVALRLMLSNGFLESIERADEMDIEAGIFEEGLGLPARTECMGFFVDGIQ 592
BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A6H5J7R4_9PHAE (SCD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R4_9PHAE) HSP 1 Score: 629 bits (1621), Expect = 1.590e-206 Identity = 333/368 (90.49%), Postives = 344/368 (93.48%), Query Frame = 2 Query: 860 VSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNY----CEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSNGFLESIERADEMDIEAGIFEEGLGLPARTECMGFFVDGIQ 1951
VSSYK+DSDKAM+ELLNF+FLACGAPST GPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGK N + + L EACRRGDDHDASTLEAVVG+LVAL+SHSASQDIRLAATLAGME+GLGVAE+LAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERI SATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVK MIQDVD+TVAREA V LRLMLSNG+LESIERADEMDIEAGIFEE L LPARTECMGFFVDGIQ
Sbjct: 3 VSSYKKDSDKAMQELLNFIFLACGAPSTAGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKVVATSLDNLPVLRTILTSGLVEACRRGDDHDASTLEAVVGVLVALASHSASQDIRLAATLAGMEVGLGVAEDLAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERILSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKTMIQDVDSTVAREAVVVLRLMLSNGYLESIERADEMDIEAGIFEEDLSLPARTECMGFFVDGIQ 370
BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A225W8S9_9STRA (SCD domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W8S9_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.320e-27 Identity = 93/333 (27.93%), Postives = 169/333 (50.75%), Query Frame = 2 Query: 803 LMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTL-EAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVARE 1798
L EA+ T L +++S+W ++ED++KA +E+LN V LACG S P P ++ ++M+ + L+ V+ED++ G +P+ +G + F+ N+ E + L + C + S + + L LSS S + IR +T+A + + + A + E+L ++ RQL A +S G G + + RK+ L+ S + + + + VF+ + RYRDV P IR + ++ L + LP+ +++D ++Y GW L+DK+ +VR+ ++ + L + + R+E F++ F SR + DVD V E
Sbjct: 126 LFEAIKSRKTPLENLLSEWRERFEEDNEKATREVLNLVLLACGGTSPCVPESEP--LAQLDMN---MSHLMDHVVEDLENANG-----EYPIMSRGRG-----TKKFQRNFEEFWEVLVKECYESEILFTSEIANTFIDWLTTLSS-SELRPIRHTSTVAILALSNSLVRTAASISEQLAIATRQLNAETNSPGTTPGSRKSPNIRKVALLKENKVLYESRLQQIWKLVNSVFTGVVVHRYRDVMPEIRVVTMQCLGHWITTLPDRFLKDNFLKYLGWLLSDKSASVRIEVVEILCELYGNESFKQRMELFTSRFLSRYLELCTDVDVGVVEE 442
BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: H2UK91_TAKRU (SCD domain-containing protein n=3 Tax=Takifugu rubripes TaxID=31033 RepID=H2UK91_TAKRU) HSP 1 Score: 120 bits (300), Expect = 2.480e-24 Identity = 90/351 (25.64%), Postives = 173/351 (49.29%), Query Frame = 2 Query: 803 LMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQ--LEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSNGFLESI 1849
+ EAV A+ +VV +W+ SYK++ + L+NF+ +CG VS D Q AE++ + +D + ++PL+ G + F++ CE L +CR +D +++ +L LS S + R +TL M++ G+ + G+ +L ++R+ +E +K + S +++ L++ + + E ++++ + +F + RYRD P IR+I +E L + PE ++ DK ++Y GW+L+DK +VR+ ++++Q L ++ RLE F++ F R+ +M+ D D+ VA E + L L++ G E +
Sbjct: 102 IYEAVSSGKNAMLTVVDEWLDSYKQNQKDSFLVLINFIVQSCGCKGV---------VSSEMFDNLQNAEIIGALTKDFN-----EDSVNYPLS-----TPGPQLKRFKAGLCEFAQLLVYSCRNSLIYDEYLFPSLLALLTGLSD-SQVRAFRHTSTLLAMKLMTGLVKVFLGVSIQLQTAQRRCDIECSKRDPDRA--------SDRLEELKASISELHENKEEVSSMMNGMFRGVFVHRYRDQLPEIRAICIEELGIWLKLDPEHFLNDKCLKYLGWTLHDKRSSVRLQCVRALQGLYQEKEFIGRLELFTSRFKERMLSMVLDKDSDVAVEV-LNLLLLIHQGTEEGL 423
BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A8J4S7P5_9STRA (SCD domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A8J4S7P5_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.710e-24 Identity = 108/377 (28.65%), Postives = 180/377 (47.75%), Query Frame = 2 Query: 809 EAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEA-VVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKK--AAEKS---RKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREA-----GVALRLMLSNGF-LESIER----ADEMDIEAGIFE 1891
E + R+ L S++ W ++ D + A +E+LNFV ACG P P ++ +EM +L+ V+ED++ G +P+A ++GK K ++ EVF + C + AS + V L LSS S + IR T+A + + + + ++L ++ RQL A +S G + A KS RK+ L+ S + + + +LVF+ + RYRDV P IR ++ L + +P+ +++D ++YHGW LNDK VR+ +Q + L + A + RLE F++ F R + DVD+TV +E V R ++S+ L+ +E+ AD DI E
Sbjct: 84 EVITRDKKPLESLLVKWRDRFEIDEESATREVLNFVLQACGGTGQCVPEAEP--LAQLEM-----GDLVNHVVEDLEKTNG-----DYPIA--SRGKGMKKFHRSFEDFWEVF---VKECYESEILFASEIATNFVDWLTTLSS-SEVRAIRHTTTIAALALSNALVSTATAISDQLAIATRQLNAETNSPGTKDEQTPPVARKSPNIRKVALLKENKALYESRLQQVLKLVNLVFTGVVVHRYRDVMPEIRVATMQCLGYWITTMPDQFLKDNFLKYHGWLLNDKVAPVRLEVVQILCELYENDAFTERLELFTSRFLPRYLELCNDVDDTVVQECIHLLIAVDKRNLISSDIELQPVEKLVFDADHEDIRKAAAE 442
BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A8C5HDV9_9TELE (Stromal antigen 3 n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5HDV9_9TELE) HSP 1 Score: 119 bits (297), Expect = 5.750e-24 Identity = 99/386 (25.65%), Postives = 183/386 (47.41%), Query Frame = 2 Query: 797 NGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEK-SRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSNGFLESIERADEMDIEAGIFEEGLGLPARTECMGFFVDGIQ 1951
N L EAV +A+ +VV +W+ SYK + + L+NF+ L+CG VS + + AE++ + ++ + +PL G + F+S CE L +CR +D +++ +L LS S + R +TL M++ G+ + +L ++RQ E ++ K+A +K S +++ L++ + + E L+++ + VF + RYRD P IR+ +E L + PE ++ D+ ++Y GW+L+DK VR+ ++++Q L ++ RLE F++ F R+ +M+ D D VA E V L L++ E ++ + I ++ GL T GF + ++
Sbjct: 81 NDLYEAVRSGKSAMVAVVDEWLDSYKRSQEAGLLVLINFIVLSCGCKGV---------VSQEMFENMENAEIISKLTKEFN-----EDSVVYPLC-----APGPRLKRFKSGLCEFVQVLVRSCRNSFIYDEFLFPSLLTLLTGLSD-SQVRAFRHTSTLLAMKLMTGLVDVAMVQCVQLQTTQRQFEMERN-------KRAEDKASDRLEELQNSIGELQENREELSSMMNAVFRGVFVHRYRDRLPDIRATCIEELGIWIKTDPEDFLNDRCLKYLGWTLHDKQSPVRLQCVRALQGLYQEKEFIGRLELFTSRFKERMLSMVLDKDPDVAVEV-VNLLLLIQQRTEEGLKEEECSHIYPLVYVSHRGLT--TAAGGFLYNKLK 436
BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: UPI00186403F1 (cohesin subunit SA-1 n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI00186403F1) HSP 1 Score: 118 bits (296), Expect = 7.580e-24 Identity = 97/354 (27.40%), Postives = 166/354 (46.89%), Query Frame = 2 Query: 803 LMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSR-KIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSNGFLESIERAD 1861
L EAV +A +VV DW+ SYK+D + A+ EL+NFV L CG VS D Q AE++ V+ ++ + +PL+ SG R FR+ CE L + +D ++V +L LS S + R +TL M++ + E + + + R+ EA ++ K+ +++ +++ L + + E L ++ VF + RYRD P IR++ +E L + P ++ D ++Y GW+L+DK AVR+ ++++Q L R+ RLE F++ F R+ M+ D D VA E + L L++ E + +
Sbjct: 99 LYEAVRSGKSATVTVVDDWLDSYKQDREAALLELINFVVLCCGCKGV---------VSREMFDTMQNAEIISVLTKEFN-----EDSVRYPLS-----ASGPQWRRFRAGLCEFVRLLVRRAQNSLLYDEYLFSSLVALLAGLSD-SQVRAFRHTSTLIAMKLMTALVEVAVMVFSQTETTHRRYEAERN-------KELERRAQDRLEELHTTYTELREHQEELQSLMSAVFKGVFVHRYRDRVPEIRAVCMEELGLWLRQHPGAFLTDGHLKYLGWTLHDKQGAVRLQCVRALQGLYREEDFIGRLELFTSRFKERMLCMVLDKDGDVAVEV-IQLLLLIQQKTEEGLSEEE 424
BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A2P6MXW1_9EUKA (Cohesin subunit SA-1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MXW1_9EUKA) HSP 1 Score: 117 bits (294), Expect = 1.270e-23 Identity = 87/334 (26.05%), Postives = 168/334 (50.30%), Query Frame = 2 Query: 803 LMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEEL-AGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREA 1801
L EA+ + T+++++V +W+ +Y +D +A +++NF+ ACG + E ++V E + ++ ELL +I + +G ++P+ A KG + F S + + +N++ D L+++ + A S+ + ++ R AT+A ME+ + + + +++ + +R + + G +K + ++K LE +++ A L K YRD P IR +E L + + + PEFY+ DKL++Y GW+L+DK+ VR+LAL+ ++RL P + LE F + F +R+ M+ D + V EA
Sbjct: 32 LFEALKKKGTSINTLVDEWIKNYTKDRKEATVQIINFLIKACGCETGE--------LTVDEYEEDEAQELLNGIITPEYLK---EGEMNYPIV-ARKGTN------FASQFAKFWNQIISKSTNKILFDGYFLDSISSWISAFSN-ALARPFRHTATMAAMEVNSALIKVINERINKDISALDRSISTERRKGASSGSQKMKDLTKKKNRLEQNKQQLQEAMNVL------------YKGYRDTVPEIRCTCVEALGRWINSYPEFYLDDKLLKYIGWALSDKDARVRILALKVVERLYAQPELADTLEIFISTFENRLIQMVADNEIDVGVEA 334
BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A5C6MJK5_9TELE (DNA helicase n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6MJK5_9TELE) HSP 1 Score: 117 bits (294), Expect = 1.630e-23 Identity = 89/351 (25.36%), Postives = 172/351 (49.00%), Query Frame = 2 Query: 803 LMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQ--LEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSNGFLESI 1849
+ EAV A+ +VV +W+ SYK++ + L+NF+ +CG VS D Q AE++ + +D + ++PL+ G + F++ CE L +CR +D +++ +L LS S + R +TL M++ + + G+ +L ++R+ +E +K + S +++ L++ + + E ++++ + +F + RYRD P IR+I +E L + PE ++ DK ++Y GW+L+DK +VR+ ++++Q L ++ RLE F++ F R+ +M+ D D+ VA E + L L++ G E +
Sbjct: 102 IYEAVSSGKNAMLTVVDEWLDSYKQNQKDSFLVLINFIVQSCGCKGV---------VSSEMFDNLQNAEIIGALTKDFN-----EDSVNYPLS-----TPGPQLKRFKAGLCEFAQLLVYSCRNSLIYDEYLFPSLLALLTGLSD-SQVRAFRHTSTLLAMKLMTSLVKVFLGVSIQLQTAQRRCDIECSKRDPDRA--------SDRLEELKASISELHENKEEVSSMMNGMFRGVFVHRYRDQLPEIRAICIEELGIWLKLDPEHFLNDKCLKYLGWTLHDKRSSVRLQCVRALQGLYQEKEFIGRLELFTSRFKERMLSMVLDKDSDVAVEV-LNLLLLIHQGTEEGL 423
BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A6I8RR30_XENTR (Stromal antigen 3 n=5 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8RR30_XENTR) HSP 1 Score: 117 bits (292), Expect = 2.400e-23 Identity = 91/348 (26.15%), Postives = 169/348 (48.56%), Query Frame = 2 Query: 803 LMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQ--LEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDL---VFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSN 1831
L EA+ +A+ +V DW+ SYK+D + A+ EL+NF+ LACG V++ ++ Q +++++ + + + P +PL S KP + F +N+ + F L C+ +D ++A++ +L LS S + R +T A +++ G+ + + L ++RQ +E AKS ++R + LE+ + + L V D+ +F + RY D S IR+I +E + M + ++ D ++Y GW+L DK AVR+ ++++ L P + +LE F++ F +R+ M+ D + VA EA + L+ N
Sbjct: 119 LFEAIRMGRSAMHVLVDDWLDSYKQDREAALLELINFLMLACGCNGV---------VTLEMLENMQNSDIIRKMTMEFNEE-----TPDYPLL-----LSTKPWKKFHANFGDFFKVLVNRCQYNIIYDELLMDALISLLTGLSD-SQVRAFRHTSTFAAVKLMSGLVKVAWDVSHHLNTTKRQFVVEHAKSP-----------ETRSPERLEALLAKQRGLQGNLEEVVDMMNGIFKGVFVHRYCDTSADIRAICMEEIGVWMRTYSQSFLSDSCLKYVGWTLYDKQGAVRLQCIRTLHSLYSVPEMAPKLELFTSRFKNRMVFMVLDKEQQVAVEAIKLIGLISQN 435 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1074.525.1 >prot_E-siliculosus-1a_F_contig1074.525.1 ID=prot_E-siliculosus-1a_F_contig1074.525.1|Name=mRNA_E-siliculosus-1a_F_contig1074.525.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=392bp MGGGGAENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLAback to top mRNA from alignment at E-siliculosus-1a_F_contig1074:23076..34860+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1074.525.1 ID=mRNA_E-siliculosus-1a_F_contig1074.525.1|Name=mRNA_E-siliculosus-1a_F_contig1074.525.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11785bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1074:23076..34860+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1074:23076..34860+ >mRNA_E-siliculosus-1a_F_contig1074.525.1 ID=mRNA_E-siliculosus-1a_F_contig1074.525.1|Name=mRNA_E-siliculosus-1a_F_contig1074.525.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2352bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1074:23076..34860+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |