mRNA_E-siliculosus-1a_F_contig107.504.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig107.504.1 vs. uniprot
Match: D7FJ05_ECTSI (Tyrosine-protein phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ05_ECTSI) HSP 1 Score: 343 bits (881), Expect = 6.340e-117 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1 Query: 118 MFFPPVSFGLVEEGLYRSALPNEINYPFLERLGLKTIIYLYPDDDIDAQLVSFLEDQDVTLVSLGEHDDKRNKSWAPVGEEIVLAALERIVDSVHYPVLITCNTGKHRTGTVVACLRKLQRWNLTSIFEEYRRFTKHKVRVQNEQFIELFDTDLVHLPPEAPRFVNR 618 MFFPPVSFGLVEEGLYRSALPNEINYPFLERLGLKTIIYLYPDDDIDAQLVSFLEDQDVTLVSLGEHDDKRNKSWAPVGEEIVLAALERIVDSVHYPVLITCNTGKHRTGTVVACLRKLQRWNLTSIFEEYRRFTKHKVRVQNEQFIELFDTDLVHLPPEAPRFVNR Sbjct: 1 MFFPPVSFGLVEEGLYRSALPNEINYPFLERLGLKTIIYLYPDDDIDAQLVSFLEDQDVTLVSLGEHDDKRNKSWAPVGEEIVLAALERIVDSVHYPVLITCNTGKHRTGTVVACLRKLQRWNLTSIFEEYRRFTKHKVRVQNEQFIELFDTDLVHLPPEAPRFVNR 167
BLAST of mRNA_E-siliculosus-1a_F_contig107.504.1 vs. uniprot
Match: A0A835YIK6_9STRA (Protein-tyrosine phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK6_9STRA) HSP 1 Score: 251 bits (641), Expect = 2.070e-80 Identity = 122/170 (71.76%), Postives = 140/170 (82.35%), Query Frame = 1 Query: 118 MFFPPVSFGLVEEGLYRSALPNEINYPFLERLGLKTIIYLYPDDDIDAQLVSFLEDQDVTLVSLGEHDDK-----RNKSWAPVGEEIVLAALERIVDSVHYPVLITCNTGKHRTGTVVACLRKLQRWNLTSIFEEYRRFTKHKVRVQNEQFIELFDTDLVHLPPEAPRFV 612 MFFPPV+F VEEGLYRS LP EINYPFLERL LKTIIYL+PD+DIDAQL SFLEDQ+V LV LGE D+ ++++ + EE V+ AL +VD+ HYP+L+ C TGKHRTGTVVACLRKLQRWNL+SIFEEYR FTKHKVRVQNEQFIELFDTDLV +PP PRF+ Sbjct: 1 MFFPPVNFAPVEEGLYRSGLPTEINYPFLERLKLKTIIYLFPDEDIDAQLESFLEDQEVKLVCLGEQDESAQLANKSRNNHMIAEETVIEALSYLVDTTHYPLLVMCGTGKHRTGTVVACLRKLQRWNLSSIFEEYRHFTKHKVRVQNEQFIELFDTDLVRIPPRPPRFL 170
BLAST of mRNA_E-siliculosus-1a_F_contig107.504.1 vs. uniprot
Match: A0A485KRG3_9STRA (Aste57867_10594 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KRG3_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.150e-61 Identity = 94/167 (56.29%), Postives = 131/167 (78.44%), Query Frame = 1 Query: 121 FFPPVSFGLVEEGLYRSALPNEINYPFLERLGLKTIIYLYPDDDIDAQLVSFLEDQDVTLVSLGEHD--DKRNKSWAPVGEEIVLAALERIVDSVHYPVLITCNTGKHRTGTVVACLRKLQRWNLTSIFEEYRRFTKHKVRVQNEQFIELFDTDLVHLPPEAPRFVN 615 F PPV++G++EE LYRS +PNE+N+PFLERL L+ I+YL P++ +AQL+SF+E+Q++ L+ LG + + R K+W P+ EE VLAAL+ I+D +YP+ +TC+ G+ RTG VV CLRK+Q+W+L+SIFEEYRRF KVR+QNEQFIELFDTDLV +P P ++ Sbjct: 4 FIPPVNYGMIEEDLYRSGIPNELNFPFLERLNLRKIVYLAPEEP-NAQLLSFVEEQEIELIVLGGNTKLENRRKAWEPMSEETVLAALDIILDRGNYPLFLTCHLGRDRTGAVVGCLRKIQQWHLSSIFEEYRRFAGSKVRLQNEQFIELFDTDLVTIPSNPPNWIK 169
BLAST of mRNA_E-siliculosus-1a_F_contig107.504.1 vs. uniprot
Match: F0ZWN6_DICPU (Tyrosine-protein phosphatase domain-containing protein n=4 Tax=Dictyostelia TaxID=33083 RepID=F0ZWN6_DICPU) HSP 1 Score: 201 bits (512), Expect = 5.180e-61 Identity = 96/162 (59.26%), Postives = 123/162 (75.93%), Query Frame = 1 Query: 127 PPVSFGLVEEGLYRSALPNEINYPFLERLGLKTIIYLYPDDDIDAQLVSFLEDQDVTLVSLGEHDDKRNKSWAPVGEEIVLAALERIVDSVHYPVLITCNTGKHRTGTVVACLRKLQRWNLTSIFEEYRRFTKHKVRVQNEQFIELFDTDLVHLPPEAPRFV 612 PP++FG+V + LYRS PNE+N+PFLE+L LK II+L PDD Q +F+EDQD+ L+ LG D W P+ EEIV++AL+ I++ YP+++ CN G+HRTGTV+ CLRKLQRWNLTSIFEEYRRF KVR+ NEQFIELFDTDLV +P AP+F+ Sbjct: 6 PPLNFGMVADDLYRSGQPNELNFPFLEKLQLKKIIFLAPDDP-SQQFQNFVEDQDIELIHLGM--DTHQNPWNPISEEIVISALKIILNMESYPLMVMCNLGRHRTGTVIGCLRKLQRWNLTSIFEEYRRFAGSKVRLLNEQFIELFDTDLVGIPDNAPKFL 164
BLAST of mRNA_E-siliculosus-1a_F_contig107.504.1 vs. uniprot
Match: A0A1V9YB19_9STRA (Tyrosine phosphatase n=9 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YB19_9STRA) HSP 1 Score: 201 bits (512), Expect = 6.940e-61 Identity = 94/167 (56.29%), Postives = 130/167 (77.84%), Query Frame = 1 Query: 121 FFPPVSFGLVEEGLYRSALPNEINYPFLERLGLKTIIYLYPDDDIDAQLVSFLEDQDVTLVSLGEHD--DKRNKSWAPVGEEIVLAALERIVDSVHYPVLITCNTGKHRTGTVVACLRKLQRWNLTSIFEEYRRFTKHKVRVQNEQFIELFDTDLVHLPPEAPRFVN 615 F PPV++G++EE LYRS +PNE+N+PFLERL L+ I+YL P++ + QL+SF+E+Q++ LV LG + + R K+W P+ EE VLAAL+ I+D +YP+ +TC+ G+ RTG VV CLRK+Q+W+L+SIFEEYRRF KVR+QNEQFIELFDTDLV +P P ++ Sbjct: 4 FIPPVNYGMIEEDLYRSGIPNELNFPFLERLNLRKIVYLAPEEP-NPQLLSFVEEQEIELVVLGCNTKLESRRKAWEPMSEETVLAALDIILDRSNYPLFLTCHLGRDRTGAVVGCLRKIQQWHLSSIFEEYRRFAGSKVRLQNEQFIELFDTDLVTIPTNPPNWIK 169
BLAST of mRNA_E-siliculosus-1a_F_contig107.504.1 vs. uniprot
Match: A0A139ANM7_GONPJ (Protein-tyrosine phosphatase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139ANM7_GONPJ) HSP 1 Score: 200 bits (509), Expect = 2.230e-60 Identity = 98/167 (58.68%), Postives = 126/167 (75.45%), Query Frame = 1 Query: 121 FFPPV--SFGLVEEGLYRSALPNEINYPFLERLGLKTIIYLYPDDDIDAQLVSFLEDQDVTLVSLGEHDDKRNKSWAPVGEEIVLAALERIVDSVHYPVLITCNTGKHRTGTVVACLRKLQRWNLTSIFEEYRRFTKHKVRVQNEQFIELFDTDLVHLPPEAPRFVN 615 F PP+ +FG+VEE LYRS PNE+N+PFLERLGLKTIIYL P+D + ++F++DQD+ + LG +W P+ EE+VL AL+ I+D +YPV++ CN G+HRTGTV+ CLRKLQRWNLTSIFEEYRR+T KVRV NEQFIELFDTDLV +P+++ Sbjct: 5 FIPPLVRNFGMVEEDLYRSGQPNELNFPFLERLGLKTIIYLAPEDP-NQTFLNFVDDQDIQMHHLGTTTS--TNAWDPISEEVVLEALDIILDPKNYPVMVMCNLGRHRTGTVIGCLRKLQRWNLTSIFEEYRRYTGPKVRVLNEQFIELFDTDLVPTRATSPKWIE 168
BLAST of mRNA_E-siliculosus-1a_F_contig107.504.1 vs. uniprot
Match: A0A7S2BN42_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BN42_9STRA) HSP 1 Score: 201 bits (511), Expect = 3.650e-60 Identity = 107/184 (58.15%), Postives = 128/184 (69.57%), Query Frame = 1 Query: 118 MFFPPVSFGLVEEGLYRSALPNEINYPFLERLGLKTIIYL-YPDD--DIDAQLVSFLEDQDVTLVSLGEHDDKRN--------KSWAPVGEEIVLAALERIVDSVHYPVLITCNTGKHRTGTVVACLRKLQRWNLTSIFEEYRRFTKHKVRVQNEQFIELFDTDLVHLPPEAPRFVNR*SGQVA 636 M FPP +FG+VE+ L+R +PN+IN PFLE+L L TI+ L +P D DID L++FL+D V LV L E DD K+ PV E++VL AL +VD+ YP+LIT GKHRTGTVVACLRKLQRWNLTSIFEEYRRF HK R QNEQFIELFD D VH+PP AP F+ S +A Sbjct: 10 MLFPPTNFGVVEQDLFRGTIPNQINTPFLEKLNLHTIVLLEHPGDYEDIDPMLLAFLKDNCVELVRLREDDDSGAREMQLSGPKTSQPVSEDVVLRALREVVDATKYPILITDIYGKHRTGTVVACLRKLQRWNLTSIFEEYRRFAGHKRRPQNEQFIELFDIDQVHVPPRAPAFLPSSSDSMA 193
BLAST of mRNA_E-siliculosus-1a_F_contig107.504.1 vs. uniprot
Match: M4C493_HYAAE (Tyrosine-protein phosphatase domain-containing protein n=18 Tax=Oomycota TaxID=4762 RepID=M4C493_HYAAE) HSP 1 Score: 199 bits (505), Expect = 7.360e-60 Identity = 97/168 (57.74%), Postives = 129/168 (76.79%), Query Frame = 1 Query: 121 FFPPVSFGLVEEGLYRSALPNEINYPFLERLGLKTIIYLYPDDDIDAQLVSFLEDQDVTLVSLGEHD--DKRNKSWAPVGEEIVLAALERIVDSVHYPVLITCNTGKHRTGTVVACLRKLQRWNLTSIFEEYRRFTKHKVRVQNEQFIELFDTDLVHLPPEAPRFVNR 618 F PPV++G+VEE LYRS PNE+N+PFLERL L+TIIYL ++ + Q SF+E+Q++ LV LG + + R KSW P+ EE VLAAL+ I+D +YP+ +TC+ G+ RTG VV CLRK+Q W+L+SIFEEYRRF KVR+QNEQFIELFDTDLV +P ++P +V + Sbjct: 4 FIPPVNYGMVEEDLYRSGQPNELNFPFLERLNLRTIIYLALEEP-NPQFQSFVEEQEIQLVFLGGNTRMESRRKSWEPLSEETVLAALDIILDRSNYPLYLTCHLGRDRTGAVVGCLRKIQGWHLSSIFEEYRRFAGSKVRLQNEQFIELFDTDLVTIPAKSPSWVRK 170
BLAST of mRNA_E-siliculosus-1a_F_contig107.504.1 vs. uniprot
Match: A0A1Y3NIN6_PIRSE (Tyrosine-protein phosphatase domain-containing protein n=4 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y3NIN6_PIRSE) HSP 1 Score: 197 bits (501), Expect = 2.200e-59 Identity = 91/163 (55.83%), Postives = 126/163 (77.30%), Query Frame = 1 Query: 109 SSVMFFPPVSFGLVEEGLYRSALPNEINYPFLERLGLKTIIYLYPDDDIDAQLVSFLEDQDVTLVSLGEHDDKRNKSWAPVGEEIVLAALERIVDSVHYPVLITCNTGKHRTGTVVACLRKLQRWNLTSIFEEYRRFTKHKVRVQNEQFIELFDTDLVHLPPE 597 +S + PP++FGLVEE LYRS PNE+N+P+LERLGLKT+++L P++ + + ++F++DQ++ L LG +W + EEIVL AL+ I++ +YP+++ CN G+HRTGTV+ CLRKLQRWNLTSIFEEYRR+ KVR+ NEQFIELFDTDLV +PP+ Sbjct: 2 TSQHYIPPLNFGLVEEDLYRSGQPNELNFPYLERLGLKTVVFLAPEEP-NQKFLNFIDDQEIQLYHLGSTS---TSAWDNISEEIVLEALDLILNPENYPLIVMCNLGRHRTGTVIGCLRKLQRWNLTSIFEEYRRYAGPKVRLLNEQFIELFDTDLVRIPPQ 160
BLAST of mRNA_E-siliculosus-1a_F_contig107.504.1 vs. uniprot
Match: A0A5J4YWC4_PORPP (Putative tyrosine-protein phosphatase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWC4_PORPP) HSP 1 Score: 197 bits (501), Expect = 2.850e-59 Identity = 94/166 (56.63%), Postives = 125/166 (75.30%), Query Frame = 1 Query: 118 MFFPPVSFGLVEEGLYRSALPNEINYPFLERLGLKTIIYLYPDDDIDAQLVSFLEDQDVTLVSLGEHDDKRNKSWAPVGEEIVLAALERIVDS-VHYPVLITCNTGKHRTGTVVACLRKLQRWNLTSIFEEYRRFTKHKVRVQNEQFIELFDTDLVHLPPEAPRFV 612 + PP++FG+VEE LYRS +PNE+N+PFLERL L+ IIYL P+D + Q ++F++DQ + L+ L +K W PV EE+VL AL+ I+D+ +YP+ I CN G+HRTGT+V CLRKLQRWNLT++FEEYRRF KVR+ NEQFIELFDTDLV +P P ++ Sbjct: 11 LLIPPINFGMVEENLYRSGMPNELNFPFLERLNLRKIIYLAPED-LTQQFLNFVDDQGIELLPLSWEGNK--SPWKPVSEEVVLTALDYILDANSNYPLYIMCNLGRHRTGTIVGCLRKLQRWNLTAVFEEYRRFAGPKVRLLNEQFIELFDTDLVRVPQNPPEWL 173 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig107.504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig107.504.1 >prot_E-siliculosus-1a_F_contig107.504.1 ID=prot_E-siliculosus-1a_F_contig107.504.1|Name=mRNA_E-siliculosus-1a_F_contig107.504.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=168bp MFFPPVSFGLVEEGLYRSALPNEINYPFLERLGLKTIIYLYPDDDIDAQLback to top mRNA from alignment at E-siliculosus-1a_F_contig107:70560..73522- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig107.504.1 ID=mRNA_E-siliculosus-1a_F_contig107.504.1|Name=mRNA_E-siliculosus-1a_F_contig107.504.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2963bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig107:70560..73522- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig107:70560..73522- >mRNA_E-siliculosus-1a_F_contig107.504.1 ID=mRNA_E-siliculosus-1a_F_contig107.504.1|Name=mRNA_E-siliculosus-1a_F_contig107.504.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1008bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig107:70560..73522- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |