Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 1 |
| Cds size | 894 |
| Model size | 894 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927570.0488977-CDS-E-siliculosus-1a_F_contig1069:9179..10073 | 1622927570.0488977-CDS-E-siliculosus-1a_F_contig1069:9179..10073 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1069 9180..10073 + |
| 1696318590.6273932-CDS-E-siliculosus-1a_F_contig1069:9179..10073 | 1696318590.6273932-CDS-E-siliculosus-1a_F_contig1069:9179..10073 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1069 9180..10073 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1069.487.1 >prot_E-siliculosus-1a_F_contig1069.487.1 ID=prot_E-siliculosus-1a_F_contig1069.487.1|Name=mRNA_E-siliculosus-1a_F_contig1069.487.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=298bp
SRWTLAQITVRREVGHSIPSTGWEKCDPLPLFPNDNSCRDAGHATPSMGW
LNAYPNDSCFREAGHTTPAMGWSKQPANDRSCREAGHTTPSIGWQKQFEK
KSSCREAGHTTPAIGWLKKGPKHSCCREAGHTTPAIGWLKAAPNDKSCRE
AGHTTPVTGWLNNSPNDSSCREGGHATPAMGWSKSLSNHSCCREAGHITP
AIGWLKKTPKDSCCSEAGHTSPAMGWLKSSPNESCCREAGHATPAMGWLK
SSPNDNSFSRGGQVTDSRLAESTAPRSRRTFDHPHSSIVELSNRTSN* back to topmRNA from alignment at E-siliculosus-1a_F_contig1069:9180..10073+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1069.487.1 ID=mRNA_E-siliculosus-1a_F_contig1069.487.1|Name=mRNA_E-siliculosus-1a_F_contig1069.487.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=894bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1069:9180..10073+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGCAGGTGGACTCTCGCACAAATCACAGTGCGAAGGGAAGTCGGCCATTC
GATCCCGTCAACAGGCTGGGAAAAGTGTGACCCATTGCCGTTGTTCCCGA
ATGACAACTCCTGCAGAGACGCTGGCCACGCAACTCCGTCGATGGGCTGG
TTGAATGCATATCCGAACGATAGCTGCTTCAGAGAGGCCGGCCACACAAC
TCCGGCAATGGGCTGGTCAAAGCAGCCTGCAAACGACAGGTCCTGTAGGG
AGGCCGGCCACACAACTCCTTCGATAGGTTGGCAGAAGCAATTTGAAAAA
AAAAGCAGCTGTAGGGAGGCCGGCCACACAACTCCGGCGATAGGCTGGTT
GAAGAAAGGTCCAAAACACAGCTGCTGTAGGGAGGCCGGCCACACAACTC
CGGCGATAGGCTGGTTGAAGGCAGCTCCAAACGACAAAAGCTGCAGAGAG
GCCGGCCACACGACTCCAGTGACAGGCTGGTTAAACAATTCTCCGAACGA
TAGCTCCTGCAGAGAGGGCGGCCACGCAACTCCGGCAATGGGCTGGTCGA
AGTCGTTGTCAAACCACAGCTGCTGCAGAGAGGCCGGCCACATAACTCCG
GCGATAGGCTGGTTGAAGAAAACTCCGAAAGATAGCTGCTGTAGCGAGGC
CGGCCACACAAGTCCTGCGATGGGCTGGTTGAAGTCATCTCCAAACGAGA
GCTGCTGCAGAGAGGCCGGCCACGCAACTCCGGCAATGGGCTGGTTGAAG
TCATCTCCAAACGACAACAGTTTCAGCCGCGGCGGCCAAGTCACCGACTC
AAGGCTAGCTGAATCCACAGCCCCCCGCAGTCGTAGAACGTTCGACCATC
CCCACAGCTCCATCGTGGAACTCTCCAACAGGACCTCTAATTGA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1069:9180..10073+ >mRNA_E-siliculosus-1a_F_contig1069.487.1 ID=mRNA_E-siliculosus-1a_F_contig1069.487.1|Name=mRNA_E-siliculosus-1a_F_contig1069.487.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1788bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1069:9180..10073+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGCAGGTGGACTCTCGCACAAATCACAGTGCGAAGGGAAGTCGGCCATTC
GATCCCGTCAACAGGCTGGGAAAAGTGTGACCCATTGCCGTTGTTCCCGA
ATGACAACTCCTGCAGAGACGCTGGCCACGCAACTCCGTCGATGGGCTGG
TTGAATGCATATCCGAACGATAGCTGCTTCAGAGAGGCCGGCCACACAAC
TCCGGCAATGGGCTGGTCAAAGCAGCCTGCAAACGACAGGTCCTGTAGGG
AGGCCGGCCACACAACTCCTTCGATAGGTTGGCAGAAGCAATTTGAAAAA
AAAAGCAGCTGTAGGGAGGCCGGCCACACAACTCCGGCGATAGGCTGGTT
GAAGAAAGGTCCAAAACACAGCTGCTGTAGGGAGGCCGGCCACACAACTC
CGGCGATAGGCTGGTTGAAGGCAGCTCCAAACGACAAAAGCTGCAGAGAG
GCCGGCCACACGACTCCAGTGACAGGCTGGTTAAACAATTCTCCGAACGA
TAGCTCCTGCAGAGAGGGCGGCCACGCAACTCCGGCAATGGGCTGGTCGA
AGTCGTTGTCAAACCACAGCTGCTGCAGAGAGGCCGGCCACATAACTCCG
GCGATAGGCTGGTTGAAGAAAACTCCGAAAGATAGCTGCTGTAGCGAGGC
CGGCCACACAAGTCCTGCGATGGGCTGGTTGAAGTCATCTCCAAACGAGA
GCTGCTGCAGAGAGGCCGGCCACGCAACTCCGGCAATGGGCTGGTTGAAG
TCATCTCCAAACGACAACAGTTTCAGCCGCGGCGGCCAAGTCACCGACTC
AAGGCTAGCTGAATCCACAGCCCCCCGCAGTCGTAGAACGTTCGACCATC
CCCACAGCTCCATCGTGGAACTCTCCAACAGGACCTCTAATTGAAGCAGG
TGGACTCTCGCACAAATCACAGTGCGAAGGGAAGTCGGCCATTCGATCCC
GTCAACAGGCTGGGAAAAGTGTGACCCATTGCCGTTGTTCCCGAATGACA
ACTCCTGCAGAGACGCTGGCCACGCAACTCCGTCGATGGGCTGGTTGAAT
GCATATCCGAACGATAGCTGCTTCAGAGAGGCCGGCCACACAACTCCGGC
AATGGGCTGGTCAAAGCAGCCTGCAAACGACAGGTCCTGTAGGGAGGCCG
GCCACACAACTCCTTCGATAGGTTGGCAGAAGCAATTTGAAAAAAAAAGC
AGCTGTAGGGAGGCCGGCCACACAACTCCGGCGATAGGCTGGTTGAAGAA
AGGTCCAAAACACAGCTGCTGTAGGGAGGCCGGCCACACAACTCCGGCGA
TAGGCTGGTTGAAGGCAGCTCCAAACGACAAAAGCTGCAGAGAGGCCGGC
CACACGACTCCAGTGACAGGCTGGTTAAACAATTCTCCGAACGATAGCTC
CTGCAGAGAGGGCGGCCACGCAACTCCGGCAATGGGCTGGTCGAAGTCGT
TGTCAAACCACAGCTGCTGCAGAGAGGCCGGCCACATAACTCCGGCGATA
GGCTGGTTGAAGAAAACTCCGAAAGATAGCTGCTGTAGCGAGGCCGGCCA
CACAAGTCCTGCGATGGGCTGGTTGAAGTCATCTCCAAACGAGAGCTGCT
GCAGAGAGGCCGGCCACGCAACTCCGGCAATGGGCTGGTTGAAGTCATCT
CCAAACGACAACAGTTTCAGCCGCGGCGGCCAAGTCACCGACTCAAGGCT
AGCTGAATCCACAGCCCCCCGCAGTCGTAGAACGTTCGACCATCCCCACA
GCTCCATCGTGGAACTCTCCAACAGGACCTCTAATTGA back to top
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