mRNA_E-siliculosus-1a_F_contig1068.483.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: D7FSX8_ECTSI (Ubiquitin carboxyl-terminal hydrolase 64E n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX8_ECTSI) HSP 1 Score: 2553 bits (6616), Expect = 0.000e+0 Identity = 1699/1969 (86.29%), Postives = 1717/1969 (87.20%), Query Frame = 1 Query: 1 RYLQVFKPRLDKFIKDHADVFMLQETETSGVEVLLLHRPGGGEGDSAEPPAGNAAESGVGGGPGADGSDPELEEVLRLSLQQQSAGQQSLAPANGTALADTAGDGXXXXXXXSAASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEGTETAYLLIYRSRSLDQEAGSPVSPADIAAAVSASSAGSGGPRNLPGGLHMTSVPPSYWMDKVDTENHSLKTVKDSKEADLHGIKVTVWVPKLLQVQMPHLVPLNPSSSSLDQLPEALRSPLVLHLDDRQTVKDLKKEVVKRLGEFCREMGVSDMGRARLSELTAHGPGMYLSKHLPDQSGHQANSPRXXXXXXXXXXXXXXXXXXDAGATSTATVPTLGDLDWGQPEGPLVLLWDGRRIDGVEVPDPGPETRPIRLVVSVLKASEDMDQPAWIDNILEQAGGFGRVPERRGSRAETSQTWRDLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAVSPDYLGSGRKRASGRGGGGAGASQMEAVQIAGPSGVFEEWKSSGVAGKGGAAAELAGLELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLVENLRSHSLPLAHDVAVATHEGQRVLLNLECDVHATSIPHLKALCLLGLVPALKENAIPSSQIQALLPXXXXXXRGTAAAPASGAKEELALVGLVKTVRLENTKSGNALDESSTGASLFATRITEGAQLMLQWGAPPATGKALVKFYVRVGNSTATARDPTRSGSTFGPLEVIADLKEPVSALKARMIKKAAEMTYIVEDDQERRIRLEALLGDSNTLVEELKDATDATAXXXXXXXXXXXXXXXXKPSKTNDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAAGEEGREKPEGGTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADKGAVTDDNDTGHKVDVDGPLFQSRLVEESGILGGQEIYLEDGRVPRPRELEITVLAYAPHFLGLAAAAAAERLKAKVSQISEISDAAADANVGDGNGDGKAADPADTARGNAAAAGGGKSALQNRSSNPSSKVARGGGGAKGEGGEAG-SVPTGLSPSAVWPDEEAAWKKGDVERFRGDPVRLLSLQRQLSMRTLGHFHIDERRSLTELRAILRGLLSEGLSKATKASMAEAMRAAKEAXXXXXXXXXXXXAQAEGRFCEYVANLLRTGVGGDADGEVMDANELEDIRKIMMMKNNKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---AGETAVPGTVDAPNGLGSSSANCSAFAGEGGADKLAASIDREGVKEVKEEHADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNLYSSVALVLCLRPRLPQTPLVQEASMSRREKLAEELLENGQANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANLEDMQNKRGVDIRALDLGWLTYNKASKNNRSPEQDRSMKAWKKELNARKERIDNTHLKEERPLDKEVKSMRTAVEKMKRSVKKTEKEEDREKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDDTPDDNAGIAIAAAQLKSNREQESIAMEKEMDKELEASDWGVPKARGNANSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASPETTLADLLRKREDEVERRRTDPVTDLHLWTFWRKNPLGDGGTLPIDEPEWPGPLKEVIVEDVSQPTLDNLHEALGKAYGIPATRVRAIKHNWGKHQWVRLTREMGIKKMKKGKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEASASEHGKXXXXXXXXXXXXK---PASKRAVPEVGLTLGG-DWDDGXXXXXXXXXXXXXXXSDMRF 5883
R+ +VFKPRLDKFIKDHADVFMLQETET+GVEVLLLHRPGGGEGD+AEPPAGNAAESGVGG PGADGSDPELEEVLRLSLQQQSAG QSLAPANGTALADTAGDG XXXX AASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEG ETAYLLIYRSRSLDQEAGSPVSPADIAAAVSASSAGSGGPRNLPGGLHMTSVPPSYWMDKVDTEN SLKT KDSKEADLHGIKVTVWVPKLLQVQMPHLVPL+PSSS+LDQLPEALRSPLVLHLDDRQTVKDLKKEVVKRLGEFCREMGVSDMGRARLSELTAHGPGMY SKHLPDQ GH+ANSPR XXXXXXXXXXXXXXXXXDAGATSTATVPTLGDLDW QPEGPLVLLW+GRRIDGVEVPDPGPETRPIRLVVSVLKASEDMDQ AWIDNILEQAGGFGRVPERRGSRAETSQTW DLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAV+PDYL SGRKRAS RGGGGAGA QMEAVQIAGPSGVFEEW+SSG+AGKGG+ AELAGLELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLV+ LRSHSLPLAHDVAVATHEGQRVLL+LECDVHATSIPHLKA CLLGLVPALKEN IPSSQIQALLPXXXXXXRGTAAAPASGAKEELALVGLVKTVRLENTKSGN LDESSTGASLFATRI+EGAQLMLQWGAPPATGKALVKFYVRVGNSTATARDPTRSGSTFGPLEVIADLKEPVSALKARM+KKAAEMTYIVED XXXXXXXXXXXXX KPEGG EGXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX KGA TDDN HKVDVDGPLFQ RLVEESGILGGQEIYLEDGRVPRPRELEITVLAYAPHFLGLAAAAAAERLKAKVSQISEISDAAAD KAADPAD ARGN SVPTGLSPSAVWPDEEAA KKGDVERFRGDPVRLLSLQRQLSMRTLGHFHIDERRSLTELRAILRGLLSEGLSKATKASMAEAMRAAKEA XXXXXXXXXX GEVMDANELEDIRKIMMMKNNK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGET VPGTVDAPNGLGSSSANCSA AGEGG DKLAASIDRE VKEVKEE ADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNL SSVALVLCLRPRLPQTPLVQEASMSRREKLAEELLENGQANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NLEDMQ KR VDIRAL+LGW TYNKASKNNRSPEQDRSMKAWKKELNARKERIDNTHLKEERPLDKEVKSM+TAVE KTEKEEDREKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDDTPDDNAGIAIAAAQLKSNREQESIAMEKE DKELEASDWGVPKARGNANSS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MASPETTLADLLRKREDEVERRRTDPVTDLHLWTFWRKNPLGDGGTLPIDEPEWPGPLKEVIVEDVSQPTLDNLHEALGKAYGIPATRVRAIKHNWGKHQWVRLTREMGIKKMKKGKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEA EHGK XXXXX PASKRAVPEVGLTLGG DWDDGXXXXXXXXXXXXXXXSDMRF
Sbjct: 614 RWDKVFKPRLDKFIKDHADVFMLQETETNGVEVLLLHRPGGGEGDAAEPPAGNAAESGVGGAPGADGSDPELEEVLRLSLQQQSAGHQSLAPANGTALADTAGDGGXXXXKGLAASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEGAETAYLLIYRSRSLDQEAGSPVSPADIAAAVSASSAGSGGPRNLPGGLHMTSVPPSYWMDKVDTENDSLKTAKDSKEADLHGIKVTVWVPKLLQVQMPHLVPLDPSSSNLDQLPEALRSPLVLHLDDRQTVKDLKKEVVKRLGEFCREMGVSDMGRARLSELTAHGPGMYPSKHLPDQPGHRANSPRRXXXXXXXXXXXXXXXXXDAGATSTATVPTLGDLDWDQPEGPLVLLWEGRRIDGVEVPDPGPETRPIRLVVSVLKASEDMDQSAWIDNILEQAGGFGRVPERRGSRAETSQTWSDLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAVAPDYLDSGRKRASERGGGGAGAPQMEAVQIAGPSGVFEEWQSSGLAGKGGSGAELAGLELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLVDTLRSHSLPLAHDVAVATHEGQRVLLHLECDVHATSIPHLKAFCLLGLVPALKENTIPSSQIQALLPXXXXXXRGTAAAPASGAKEELALVGLVKTVRLENTKSGNTLDESSTGASLFATRISEGAQLMLQWGAPPATGKALVKFYVRVGNSTATARDPTRSGSTFGPLEVIADLKEPVSALKARMVKKAAEMTYIVEDXX--------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXKPEGGAEGXXXXXXXXXXXXXXASKXXXXXXXXXXXXXXXXXDGIPXXXXXXXXXXXXXXXXXXKGAATDDNGNKHKVDVDGPLFQDRLVEESGILGGQEIYLEDGRVPRPRELEITVLAYAPHFLGLAAAAAAERLKAKVSQISEISDAAADXXXXXXXXXXKAADPADPARGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVPTGLSPSAVWPDEEAARKKGDVERFRGDPVRLLSLQRQLSMRTLGHFHIDERRSLTELRAILRGLLSEGLSKATKASMAEAMRAAKEAQAXXXXXXXXXXX------------XXXXXXXXXXXGEVMDANELEDIRKIMMMKNNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETTVPGTVDAPNGLGSSSANCSAAAGEGGGDKLAASIDREWVKEVKEERADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNLCSSVALVLCLRPRLPQTPLVQEASMSRREKLAEELLENGQANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NLEDMQKKRDVDIRALELGWTTYNKASKNNRSPEQDRSMKAWKKELNARKERIDNTHLKEERPLDKEVKSMKTAVEXXXXXXXKTEKEEDREKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDDTPDDNAGIAIAAAQLKSNREQESIAMEKETDKELEASDWGVPKARGNANSSGKKGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAMASPETTLADLLRKREDEVERRRTDPVTDLHLWTFWRKNPLGDGGTLPIDEPEWPGPLKEVIVEDVSQPTLDNLHEALGKAYGIPATRVRAIKHNWGKHQWVRLTREMGIKKMKKGKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEAYR-EHGKGQAKTKKXXXXXXXXXPASKRAVPEVGLTLGGGDWDDGXXXXXXXXXXXXXXXSDMRF 2488
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: A0A6H5JDC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDC1_9PHAE) HSP 1 Score: 1324 bits (3426), Expect = 0.000e+0 Identity = 1052/1237 (85.04%), Postives = 1064/1237 (86.01%), Query Frame = 1 Query: 2275 GNSTATARDPTRSGSTFGPLEVIADLKEPVSALKARMIKKAAEMTYIVEDDQERRIRLEALLGDSNTLVEELKDATDATAXXXXXXXXXXXXXXXXKPS--------KTNDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAAGEEGREKPEGGTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADKGAVTDDNDTGHKVDVDGPLFQSRLVEESGILGGQEIYLEDGRVPRPRELEITVLAYAPHFLGLAAAAAAERLKAKVSQISEISDAAADANVGDGNGDGKAADPADTARGNAAAAGGGKSALQNRSSNPSSKVARGGGGAKGEGGEAGSVPTGLSPSAVWPDEEAAWKKGDVERFRGDPVR---------------------LLSLQRQLSMRTLGHFHIDERRSLTELRAILRGLLSEGLSKATKASMAEAMRAAKEAXXXXXXXXXXXXAQAEGRFCEYVANLLRTGVGGDADGEVMDANELEDIRKIMMMKNNKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAVPGTVDAPNGLGSSSANCSAFAGEGGADKLAASIDREGVKEVKEEHADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNLYSSVALVLCLRPRLPQTPLVQEASMSRREKLAEELLENGQANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANLEDMQNKRGVDIRALDLGWLTYNKASKNNRSPEQDRSMKAWKKELNARKERIDNTHLKEERPLDKEVKSMRTAVEKMKRSVKKTEKEEDREKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDDTPDDNAGIAIAAAQLKSNREQESIAMEKEMDKELEASDWGVPKARGNANSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASPETTLADLLRKREDEVERRRTDPVTDLHLWTFWRKNPLGDGGTLPIDEPEWPGPLKEVIVEDVSQPTLDNLHEALGKAYGIPATRVRAIKHNWGKHQWVRLTREMGIKKMKKGKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEASAS---EHGKXXXXXXXXXXXXK--PASKRAVPEVGLTLGGDWDDGXXXXXXXXXXXXXXXSDMRF 5883
GNSTATARDPTRSGSTFGPLEVIADLKEPVSALKARMIKKAAEMTYIVEDDQERRIRLEALLGDSNTLVEELKDATDAT XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDA GE XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DKGAVTDDN GHKVDVDGPLFQ RLVEESGILGGQEIYLEDGRVPRPRELEITVLAYAPHFLGLAAAAAAERLKAKVSQISEISDAAADANVG+GNGDGKAADPAD ARGNAA K + G VPTGLSPSAVWPDEEAA KKGDVERFRGDPVR LLSLQRQLSMRTLGHFHIDERRSLTELRAILRGLLSEGLSKA KASMAEA+RAAKE AQ DADGEVMDANELEDIRKIMM KNNKN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGET VPGTVDAPNGLGSSSANCSA AG+G DK AASIDR+GV+EVKEEHADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNL SSVALVLCLRPRLPQTPLVQEASMSRREKLAEELLENGQANGD XXXXXXXXXXXXXXXXXXXXXXXXXXXX NLEDMQ KR VDIRALDLGW TY+KA KN RSPEQDR MK WKKELNARKERIDN HLKEERPLDKEVKSM+TAVEKMKRS+KKTEKEEDREKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDD PDDNA IAIAAAQLKSNREQESIAMEKEMDKELEASDWGVPKARGNA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASPETTLADLLRKREDEVERRRTDPVTDLHLWTF RKNPLGDGGTLPIDEPEWPGPLKEVIVE+VSQPTLDNLHEALGKAYGIPA+RVRAIKHNWGKHQWVRLTREMGIKKMKKGKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEASAS EHGKXXXXXXXXXXXX PASKRA+PEVGLTLGGDWDDGXXXXXXXXXXXXXXXSDMRF
Sbjct: 21 GNSTATARDPTRSGSTFGPLEVIADLKEPVSALKARMIKKAAEMTYIVEDDQERRIRLEALLGDSNTLVEELKDATDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDA-GEXXXXXXX--XXXXXXXXXXXEKEAGAASKTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKGAVTDDNGDGHKVDVDGPLFQDRLVEESGILGGQEIYLEDGRVPRPRELEITVLAYAPHFLGLAAAAAAERLKAKVSQISEISDAAADANVGNGNGDGKAADPADPARGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXKVGLVPTGLSPSAVWPDEEAARKKGDVERFRGDPVRVGVFFSGGETTQQGYISRQIRLLSLQRQLSMRTLGHFHIDERRSLTELRAILRGLLSEGLSKAMKASMAEAIRAAKE-------------AQXXXXXXXXXXXXXXXXXXQDADGEVMDANELEDIRKIMMRKNNKNPSKTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AGETTVPGTVDAPNGLGSSSANCSAAAGQGEGDKSAASIDRQGVEEVKEEHADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNLCSSVALVLCLRPRLPQTPLVQEASMSRREKLAEELLENGQANGDHGTXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NLEDMQKKRDVDIRALDLGWTTYSKALKNTRSPEQDRLMKTWKKELNARKERIDNAHLKEERPLDKEVKSMKTAVEKMKRSIKKTEKEEDREKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDDAPDDNASIAIAAAQLKSNREQESIAMEKEMDKELEASDWGVPKARGNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASPETTLADLLRKREDEVERRRTDPVTDLHLWTFCRKNPLGDGGTLPIDEPEWPGPLKEVIVENVSQPTLDNLHEALGKAYGIPASRVRAIKHNWGKHQWVRLTREMGIKKMKKGKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEASASAYREHGKXXXXXXXXXXXXXXXPASKRAMPEVGLTLGGDWDDGXXXXXXXXXXXXXXXSDMRF 1238
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: A0A6H5JBH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH2_9PHAE) HSP 1 Score: 680 bits (1755), Expect = 2.830e-222 Identity = 368/398 (92.46%), Postives = 376/398 (94.47%), Query Frame = 1 Query: 1090 AGATSTATVPTLGDLDWGQPEGPLVLLWDGRRIDGVEVPDPGPETRPIRLVVSVLKASEDMDQPAWIDNILEQAGGFGRVPERRGSRAETSQTWRDLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAVSPDYLGSGRKRASGRGGGGAGASQMEAVQIAGPSGVFEEWKSSGVAGKGGAAAELAGLELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLVENLRSHSLPLAHDVAVATHEGQRVLLNLECDVHATSIPHLKALCLLGLVPALKENAIPSSQIQALLPXXXXXXRGTAAAPASGAKEELALVGLVKTVRLENTKSGNALDESSTGASLFATRITEGAQLMLQWGAPPATGKALVKFYVRVGNS 2283
+GATSTATVPTLGDLDWGQPEGPLVLLWDGRRIDGVEVPDPGP TRPIRLVVSVLKASED+DQ AWIDNILEQAGGFGRVPERRGSRAET W DLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAV+PDYLGSGRKRAS RGGGGAGASQMEAVQIAGPSGVFEEWK GGA AELAGLELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLVE LRSH LPLAHDVAVATHEGQRVLLNLECDVHATS+PHLKALCLLGLVPALKENA+PSSQIQALLP XXXX RGTA APASGAKEELALVGLVKTVRLE+TKSGNALDESSTGASLFA R+T+GAQLMLQWGAPPATGKALVKFYVRVG S
Sbjct: 56 SGATSTATVPTLGDLDWGQPEGPLVLLWDGRRIDGVEVPDPGPGTRPIRLVVSVLKASEDIDQSAWIDNILEQAGGFGRVPERRGSRAET---WSDLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAVTPDYLGSGRKRASERGGGGAGASQMEAVQIAGPSGVFEEWK-------GGAGAELAGLELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLVETLRSHGLPLAHDVAVATHEGQRVLLNLECDVHATSVPHLKALCLLGLVPALKENAVPSSQIQALLPPXXXXARGTATAPASGAKEELALVGLVKTVRLEDTKSGNALDESSTGASLFAARVTDGAQLMLQWGAPPATGKALVKFYVRVGES 443
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: A0A6H5JBL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL7_9PHAE) HSP 1 Score: 230 bits (587), Expect = 3.630e-60 Identity = 133/171 (77.78%), Postives = 138/171 (80.70%), Query Frame = 1 Query: 1 RYLQVFKPRLDKFIKDHADVFMLQETETSGVEVLLLHRPGGGEGDSAEPPAGNAAESGVGGGPGADGSDPELEEVLRLSLQQQSAGQQSLAPANGTALADTAGDGXXXXXXXSAASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEGTETAYLLIYRSRSL 513
R+ +VFKPRLDKFI DHADVFMLQETETSGVEVLLLHRPGGGEGD+AEPPAGNA PGADG QQSLAPANGTALADT GDGXXXXXXX ASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEG ETAYLLIYRSR++
Sbjct: 473 RWDKVFKPRLDKFIMDHADVFMLQETETSGVEVLLLHRPGGGEGDAAEPPAGNAXXXXXXXAPGADG-------------------QQSLAPANGTALADTVGDGXXXXXXXXXASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEGAETAYLLIYRSRNI 624
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: UPI000BA83342 (ubiquitin carboxyl-terminal hydrolase 40-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA83342) HSP 1 Score: 61.6 bits (148), Expect = 2.020e-5 Identity = 48/176 (27.27%), Postives = 78/176 (44.32%), Query Frame = 1 Query: 385 SEKHGR-WFSFDDRKVTPISIRDLQKPFEGTETAYLLIYRSRSLDQEAGSPVSPADIAAAVSASSAGSGGPRNLPGGLHMTSVPPSYWMDKVDTENHSLKTVKDSKEADLHGIKVTVWVPKLLQVQMPHLVPLNPSSSSLDQLPEALRSPLVLHLDDRQTVKDLKKEVVKRLGEFC 909
++K G WF F+D +V+PI +RD++K F G E+AY+L YR +SL R L G + + + P +D V EN L+ +++ E L+ I V + Q L PL + S +D L +D R+T+ L+ +++ E C
Sbjct: 469 NQKFGHNWFDFNDSRVSPIYVRDIEKQFSGRESAYMLFYRRKSLQ--------------------------RPLEGRGNPSYLIPQKLIDLVKQENEELQKQREAYEVALNTITVQIHFSVNHQYHQGALHPLKDALSVVD-----------LKIDYRKTLTCLRSAIMELSQELC 607
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: A0A812JQY0_9DINO (USP40 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JQY0_9DINO) HSP 1 Score: 61.2 bits (147), Expect = 3.260e-5 Identity = 38/134 (28.36%), Postives = 64/134 (47.76%), Query Frame = 1 Query: 382 ASEKH-------GRWFSFDDRKVTPISIRDLQKPFEGTETAYLLIYRSRSLDQEAGS-----PVSPADIAAAVSASSAGSGGPRNLPGGLHMTSVPPSYWMDKVDTENHSLKTVKDSKEADLHGIKVTVWVPKL 747
ASE H G WF+F+D V+ + + D+ FEG+ AYLL+YRSR+++Q A + P + +A A++ VPP YW ++ E+ +L +D E + +++ V P +
Sbjct: 929 ASELHEQLAAQWGNWFAFNDSSVSAVGLHDVASGFEGSSCAYLLMYRSRTVEQTAAASRGEGPAAAGSLAPAIA------------------QPVPPEYWSRRIMRESDALARQRDRYEMKRNQVRLWVHSPSM 1044
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: A0A8C4S322_ERPCA (Ubiquitin specific peptidase 40 n=4 Tax=Polypteridae TaxID=8289 RepID=A0A8C4S322_ERPCA) HSP 1 Score: 60.5 bits (145), Expect = 5.260e-5 Identity = 56/207 (27.05%), Postives = 91/207 (43.96%), Query Frame = 1 Query: 397 GRWFSFDDRKVTPISIRDLQKPFEGTETAYLLIYRSRSLDQEAGSPVSPADIAAAVSASSAGSGGPRNLPGGLHMTSVPPSYWMDKVDTENHSLKTVKDSKEADLHGIKVTVWVPKLLQVQMPHLVPLNPSSSSLDQLPEALRSPLVLHLDDRQTVKDLKKEVVKRLGEFCREMGVSDMGRARLSELTAHG---PGMYLSKHLPDQS 1008
G+WF F+D V PI I+D+QK FEG E+AY+L YR L + + + +P P++ +++ + EN L+ ++ + + I++ V Q H N + DQ+ L LH D R+TV+DL++ + ++LG D G SELT G++L HL D +
Sbjct: 446 GQWFDFNDSIVLPIQIKDIQKQFEGKESAYMLFYRKSCLKRPSDARKNPKFKV--------------------------PAHLIEETEQENMKLQKLRADFDLAKNLIEIHVH-----QGSKYHFF--NGALHPFDQITSILN----LHFDKRKTVRDLREVIYQQLGS-------KDDG----SELTFAKRLPAGLHLYDHLTDDN 604 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 7 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1068.483.1 >prot_E-siliculosus-1a_F_contig1068.483.1 ID=prot_E-siliculosus-1a_F_contig1068.483.1|Name=mRNA_E-siliculosus-1a_F_contig1068.483.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1941bp MLQETETSGVEVLLLHRPGGGEGDSAEPPAGNAAESGVGGGPGADGSDPEback to top mRNA from alignment at E-siliculosus-1a_F_contig1068:12430..37156- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1068.483.1 ID=mRNA_E-siliculosus-1a_F_contig1068.483.1|Name=mRNA_E-siliculosus-1a_F_contig1068.483.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=24727bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1068:12430..37156- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1068:12430..37156- >mRNA_E-siliculosus-1a_F_contig1068.483.1 ID=mRNA_E-siliculosus-1a_F_contig1068.483.1|Name=mRNA_E-siliculosus-1a_F_contig1068.483.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=11646bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1068:12430..37156- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |