mRNA_E-siliculosus-1a_F_contig1066.471.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1066.471.1 vs. uniprot
Match: A0A6H5JS34_9PHAE (Ammonium_transp domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS34_9PHAE) HSP 1 Score: 373 bits (957), Expect = 1.450e-121 Identity = 186/212 (87.74%), Postives = 192/212 (90.57%), Query Frame = 2 Query: 1070 MWSSNAVVRQGADREQQDLHSAAVNGILSGLVGITAGCATTDPRLTILCAVVSAFIYHYGYRLQLHHGLDDAMNAVPVHLYCGIWGLFFAALMYSPGRHDTLMRVYGIDESRGGCGRGDQVAANVAFSVVVLAWSGATSFVLYHVLNRLFPEELKAPDAGTRVELSDFMHVIDAVQLHIAGAQSATGAANPNPVGPPSSHHVGNPAPAAPRH 1705 MWSSNAVVRQGADREQQDLHSAAVNGILSGLVGITAGCATTDPRLTI+CAVVSAFIYHYGYRLQLHHGLDDAMNAVPVHLYCGIWGLFFAALMYSPGRHDTLMRVYGIDESRG CGRGDQVAAN+AFSVVVLAWSGATSF LYH+LN LFP+EL A DAGT VELSDFMHVIDAVQLH+A AQ+ATGA NP V NPA AAPRH Sbjct: 1 MWSSNAVVRQGADREQQDLHSAAVNGILSGLVGITAGCATTDPRLTIVCAVVSAFIYHYGYRLQLHHGLDDAMNAVPVHLYCGIWGLFFAALMYSPGRHDTLMRVYGIDESRGDCGRGDQVAANLAFSVVVLAWSGATSFALYHILNVLFPKELNALDAGTTVELSDFMHVIDAVQLHVARAQNATGATNP----------VDNPAAAAPRH 202
BLAST of mRNA_E-siliculosus-1a_F_contig1066.471.1 vs. uniprot
Match: A0A6H5JWS1_9PHAE (Ammonium_transp domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS1_9PHAE) HSP 1 Score: 246 bits (629), Expect = 2.280e-74 Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 2 Query: 542 MSGSVADRVPYLLYGIYAVWTCAFTYPVVAHWAWSEDGWMSQAVGGIGNCGVLDFAGSGVVHCFAGTATFVWAYLLPDREGRFVGKATGRVNSVNFGYGFALQDRTQQALGMFLLWLGW 898 MSGSVADRVPYLLYGIYAVWTCAFTYPV+AHWAWS+DGWMSQAVGGIGNCGVLDFAGSGVVHCFAGTAT +WAYLLPDR GRFVGKATGRVNSVNFGYGFALQDRTQQALGMFLLWLGW Sbjct: 1 MSGSVADRVPYLLYGIYAVWTCAFTYPVLAHWAWSDDGWMSQAVGGIGNCGVLDFAGSGVVHCFAGTATLMWAYLLPDRAGRFVGKATGRVNSVNFGYGFALQDRTQQALGMFLLWLGW 119
BLAST of mRNA_E-siliculosus-1a_F_contig1066.471.1 vs. uniprot
Match: D7G436_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G436_ECTSI) HSP 1 Score: 248 bits (634), Expect = 1.480e-68 Identity = 172/498 (34.54%), Postives = 246/498 (49.40%), Query Frame = 2 Query: 218 AESIDIFFILVCTILVLMMQAGFALYEVGTIRRTPVEVILIKNIVDASIAYASWFAVGSMFAGN-------GNRFIGWADAGPFLAGDEYNGDDSSLAYVRFLFSAAFAGTAVTVMSGSVADRVPYLLYGIYAVWTCAFTYPVVAHWAWSEDGWMSQAVG-GIGNCGVLDFAGSGVVHCFAGTATFVWAYLLPDREGRFV------GKATG----------RVNSVNFGYGFALQDRTQQALGMFLLWLGWFGFNCGSALSITSSDSREIVSIVAVNTSISPVVCCLTSVAIEWAYFKNW-------------LHIREQFVMWSSNA--------------------VVRQGADREQQ----------DLHSAAVNGILSGLVGITAGCATTDPRLTILCAVVSAFIYHYGYRLQLHHGLDDAMNAVPVHLYCGIWGLFFAALMYSPG-RHDTLMRVYGIDESRGGCGRGDQVAANVAFSVVVLAWSGATSFVLYHVL 1507 + ++D + C +LVL++Q GFA YEVG IR T + IL+KNI DA+++ +W+ +G FA G F + ++ PF A +G+ ++++++ LF +FA T TV+SG+VADR+P Y +YA T A YP++AH W++DGW S A + CGV+DFAGSG+VH F G + + R GRF G A G ++N GF D LG FLLWLGW+GFNCGS I+++ S+ A+NTSI C S+ E Y + W LH+ V A + + A+ E++ +LH AA NGIL+GLVGITAGCAT P I + VSA +YH YR + +DDA++A VHL CG WG+ A G R D + C RG QV N ++ A++ +F+L+ +L Sbjct: 16 SHAVDFTWRFFCLVLVLLLQGGFASYEVGAIRETSTQHILLKNIGDATVSLVAWYLLGYGFAFGEDAGHIIGTSFFVFTES-PFAA---TSGNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASPAREYPLFGCGVIDFAGSGIVHMFGGAIGLFVSRKVRSRGGRFFPAKHWDGGANGSKLKNHTDQPQLNEA----GFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGAAWGCAFSMLFELGYHR-WTPKYRRGDDIEDPLHLAPFDVDGGEEADRAERVRVAETHLSKKTLAKIAKHNAEHEKEVFTWPWSTHINLHGAACNGILAGLVGITAGCATMSPHAAIGVSFVSALLYHVSYRGFICLMIDDAVSAGAVHLVCGAWGVIAAGFTGMEGPRLDAGYPPQAL------CSRGAQVGTNFVMVAIITAYAYLCTFILWAIL 498
BLAST of mRNA_E-siliculosus-1a_F_contig1066.471.1 vs. uniprot
Match: D7G3S7_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3S7_ECTSI) HSP 1 Score: 243 bits (621), Expect = 2.870e-68 Identity = 160/446 (35.87%), Postives = 227/446 (50.90%), Query Frame = 2 Query: 224 SIDIFFILVCTILVLMMQAGFALYEVGTIRRTPVEVILIKNIVDASIAYASWFAVG--------SMFAGNGNRFIGWADAGPFLAGDEYNGDDSSLAYVRFLFSAAFAGTAVTVMSGSVADRVPYLLYGIYAVWTCAFTYPVVAHWAWSEDGWMS--QAVGGIGNCGVLDFAGSGVVHCFAGTATFVWAYLLPDREGRFVGKATGRVNSVNFGYGFALQDRTQQALGMFLLWLGWFGFNCGSALSITSSDSREIVSIVAVNTSISPVVCCLTSVAIEWAYFK-NWLHIREQFVMWSSNAVVRQGADREQQDLHSAAVNGILSGLVGITAGCATTDPRLTILCAVVSAFIYHYGYRLQLHHGLDDAMNAVPVHLYCGIWGLFFAALM----------YSPGRHDTLMRVYGIDESRGGCGRGDQVAANVAFSVVVLAWSGATSFVLY 1498 S++ F+++ +LV MQ GFA+ EVG ++ + ILIKN+ DAS+ W+ G S N FIG +GDD + + +LF AFA T T++SG+V +RV + Y +YA+ F YPVV HW WS GW S + + +CGVLDFAGSGVVH GTA V A LL R GRF+ + ++F Y Q LG LW+GW+GFN S L+I E+ + VNT+I+ V C+TSV + AYF+ ++ I +AA NG+L GLV ITAGC+ P ++ V+ F+Y+ L L +DD ++A PVH++CG+WG+ A L+ YS + D YG CG G+Q AN+ F +VVL W+G SF+++ Sbjct: 25 SVNTFWLMFGAVLVFFMQTGFAMLEVGAVQAKNAKNILIKNVFDASLGGIMWYTTGYGIALGSDSYETSGNNGFIGTDGFLLTTGAFRGSGDDVGINWAGWLFQWAFAATTATIVSGAVVERVTFGAYVVYAMCLLGFIYPVVVHWGWSAGGWASAWRETELLMDCGVLDFAGSGVVHMTGGTAALVGAVLLGPRSGRFIDGIPVELPQLSFVY---------QTLGTLCLWMGWYGFNGVSTLAIVGLG--EVAARAMVNTTIAGGVACVTSVTV--AYFRIGYVDI-------------------------TAANNGVLGGLVAITAGCSVVMPEGAVVIGFVAGFVYNASSVLLLKLQIDDVVDASPVHMFCGMWGVLAAGLLAEKDNYGESYYSERQGDCCGAFYG-------CG-GNQFTANLIFVIVVLGWAGFCSFLMF 424
BLAST of mRNA_E-siliculosus-1a_F_contig1066.471.1 vs. uniprot
Match: A0A835ZB85_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB85_9STRA) HSP 1 Score: 236 bits (603), Expect = 1.270e-65 Identity = 180/515 (34.95%), Postives = 250/515 (48.54%), Query Frame = 2 Query: 218 AESIDIFFILVCTILVLMMQAGFALYEVGTIRRTPVEVILIKNIVDASIAYASWFAVGSMFA---------GNGNRFIGWADAGPFLAGDEYNGDDSS---LAY--VRFLFSAAFAGTAVTVMSGSVADRVPYLLYGIYAVWTCAFTYPVVAHWAWSEDGWMSQAVGG--IGNCGVLDFAGSGVVHCFAGTATFVWAYLLPDREGRFVGKATGRVNSVNFGYGFALQDRTQQALGMFLLWLGWFGFNCGSALSITSSDSREIVSIVAVNTSISPVVCCLTSVAIEWAYFKNWLHIREQFVMWSSNAVVRQGADREQQDLHSAAVNGILSGLVGITAGCATTDPRLTILCAVVSAFIYHYGYRLQLHHGLDDAMNAVPVHLYCGIWGLFFAALMYSPGRHDTLMRVYGIDESRGGCGR-----GDQVAANVAFSVVVLAWSGATSFVLYHVLN-----RLFPE-ELKAPDAGTRVELSDFMHVIDAVQLHIAGAQSATGAANPNPVGPPSSHHVGN 1681 A S+D F++L ILV MQAGFA EVG ++ + IL+KN+ DASI +W+ G A G N FIG G FLAGD + DD++ L Y +LF AFA T+ T++SG+V +R+ + Y IYAV F YP+V H W+ GWMS + CGV+DFAGSGVVH G A V A ++ R GRF G V ++ QA+G LW GW+GFN S+L I + + +N+++S + L+S + + + F+ +AA NGILSG V ITAG P IL ++ IY +L L +DD +NA PVHL+CG+WG+F L+ P + RVY D S CG G Q+ A + F +V LAW+G TS +++ V R+ E E D ++D++H + L S T AA P PVGP + + N Sbjct: 26 AVSMDTFWLLFGAILVFFMQAGFAFLEVGCVQSKNQKNILVKNVFDASIGAIAWYITGYGIAFGHDAYAEDGTTNGFIG--TTGYFLAGDHFRSDDATDEQLGYEWANWLFQWAFAATSATIVSGAVMERISFGCYLIYAVTLIGFIYPIVVHMTWNSGGWMSAFRQDHLLSRCGVVDFAGSGVVHMTGGVAALVGAVMVGPRFGRF--GPNGEVRAL------PQLSWVYQAIGTLFLWFGWYGFNGVSSLYIVGKGL--VAAKTMINSTLSGAIGGLSSTLVA--------QVLDGFID------------------PAAANNGILSGFVAITAGSGVAQPEGAILIGFIAGIIYQATSKLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEPNNYG---RVYYEDRSGICCGAFYGCGGSQLGAQIVFILVNLAWTGVTSALMFTVAKYTVGLRVSKEIEELGMDTSKHGGMADYVHHVGESSLD----NSRTSAA-PFPVGPAGAPVITN 494
BLAST of mRNA_E-siliculosus-1a_F_contig1066.471.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI) HSP 1 Score: 229 bits (584), Expect = 2.480e-63 Identity = 157/445 (35.28%), Postives = 228/445 (51.24%), Query Frame = 2 Query: 197 IPSVKDLAESIDIFFILVCTILVLMMQAGFALYEVGTIRRTPVEVILIKNIVDASIAYASWFAVGS--MFAGNGNRFIGWADAGPFLAGDEYNGDDSSL----AYVRFLFSAAFAGTAVTVMSGSVADRVPYLLYGIYAVWTCAFTYPVVAHWAWSEDGWMS--QAVGGIGNCGVLDFAGSGVVHCFAGTATFVWAYLLPDREGRFVGKATGRVNSVNFGYGFALQDRTQQALGMFLLWLGWFGFNCGSALSITSSDSREIVSIVAVNTSISPVVCCLTSVAIEWAYFKNWLHIREQFVMWSSNAVVRQGADREQQDLHSAAVNGILSGLVGITAGCATTDPRLTILCAVVSAFIYHYGYRLQLHHGLDDAMNAVPVHLYCGIWGLFFAALMYSPGRHDTLMRVYGIDESRGGC---GRGDQVAANVAFSVVVLAWSGATSFVLY 1498 I VK +++ +DIF+++ ILV MQ GFA+ EVG++ + ILIKNI DAS+ W+ +G F +FIG + L G + DD +L +Y +LF AFA TA T++SG+VA+RV + Y IY+V +F YPVV HW W+ GW S + + CGV+DFAGSGVVH G A A ++ R GRF G N++ Q Q+LG +LW GW+GFN S L I + + V T+IS +T+V + +W G AA NG+L+GLVG+TAGC+T +P ++ ++S F+Y Y ++ + +DD ++A+PVH +CG WG+F A+L + + M Y + G G G+ V AN F + V AW AT L+ Sbjct: 19 IGDVKTVSDDMDIFWLMFGAILVFFMQTGFAMLEVGSVSIKNTKNILIKNIGDASLGAICWWLLGYGVAFGDTSGKFIGTNNFD--LKGALFEADDGTLTNGYSYASWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWA-GGWASAWRETDLLFGCGVIDFAGSGVVHMTGGLAALCAAIVVGPRTGRF--NEDGTANTL------PQQSAVLQSLGTLILWFGWYGFNGVSTLYIVGFAG--VAAKTMVTTTISAAFGAVTTVLLGKFNLGHW-----------------DGG---------AANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYG--MAYYDRADKCAGAFYGGAGNAVGANFVFILAVTAWVVATCTALF 422
BLAST of mRNA_E-siliculosus-1a_F_contig1066.471.1 vs. uniprot
Match: A0A835ZI90_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI90_9STRA) HSP 1 Score: 229 bits (584), Expect = 6.180e-63 Identity = 168/487 (34.50%), Postives = 237/487 (48.67%), Query Frame = 2 Query: 194 EIPSVKDLAESIDIFFILVCTILVLMMQAGFALYEVGTIRRTPVEVILIKNIVDASIAYASWFAVGSMFA---------GNGNRFIGWADAGPFLAGDEYNGDDSS-----LAYVRFLFSAAFAGTAVTVMSGSVADRVPYLLYGIYAVWTCAFTYPVVAHWAWSEDGWMSQAVGG--IGNCGVLDFAGSGVVHCFAGTATFVWAYLLPDREGRFVGKATGRVNSVNFGYGFALQDRTQQALGMFLLWLGWFGFNCGSALSITSSDSREIVSIVAVNTSISPVVCCLTSVAIEWAYFKNWLHIREQFVMWSSNAVVRQGADREQQDLHSAAVNGILSGLVGITAGCATTDPRLTILCAVVSAFIYHYGYRLQLHHGLDDAMNAVPVHLYCGIWGLFFAALMYSPGRHDTLMRVYGIDESRG---GCGRGDQVAANVAFSVVVLAWSGATSFVLYHVLN-----RLFPE-ELKAPDAGTRVELSDFMH 1579 E+ + DLA S++ F++L +LV MQ+GFA EVG ++R + ILIKN+ DASI +W+ G A G+ N FIG G FLAG + G D S + +LF AFA T T++SG+V +R+ + Y IYAV F YP++ H WS GWMS + CGV+DFAGSGVVH G A V A ++ R GRF +G V ++ QA+G LW GW+GFN S L IT + + V +N+++S + L+S + A++ G +AA NGILSG V IT P +L ++ IY L L +DD +NA PVHL+CG+WG+F L+ + D G GCG G+Q+AA + F +V LAW+G TS +++ V R+ E E D+ L+D+ H Sbjct: 23 EMGRLDDLALSVNTFWLLFGAVLVFFMQSGFAFLEVGCVQRKNQKNILIKNVFDASIGALAWYVAGYGIAFGYDSYVKTGDTNGFIG--TTGYFLAGSTFRGGDVSDEDLGYTWANWLFQWAFAATCATIVSGAVMERISFGCYLIYAVTLTGFIYPIMVHMTWSAGGWMSAFREDFLLSRCGVVDFAGSGVVHMTGGVAALVGAVMVGPRAGRF--GPSGEVRAL------PQLSWVYQAIGTLFLWFGWYGFNGVSTLLITGKGL--VAAKVMINSTLSGAIGGLSSTLV---------------------ALLMNGYIDP-----AAANNGILSGFVAITGPSGVVQPEGALLIGFIAGLIYQGASNLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEEHNYGRAYYEDRADICCGAFYGCG-GNQLAAQIVFILVNLAWTGVTSAIMFTVAKYTVGLRVSKEVEEMGMDSSKHGGLADYAH 470
BLAST of mRNA_E-siliculosus-1a_F_contig1066.471.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI) HSP 1 Score: 228 bits (581), Expect = 7.490e-63 Identity = 159/457 (34.79%), Postives = 229/457 (50.11%), Query Frame = 2 Query: 173 DASVDAGEIPSVKDLAESIDIFFILVCTILVLMMQAGFALYEVGTIRRTPVEVILIKNIVDASIAYASW--FAVGSMFAGNGNRFIGWADAGPF-LAGDEYNGDDSSL----AYVRFLFSAAFAGTAVTVMSGSVADRVPYLLYGIYAVWTCAFTYPVVAHWAWSEDGWMSQAVGG--IGNCGVLDFAGSGVVHCFAGTATFVWAYLLPDREGRFVGKATGRVNSVNFGYGFALQDRTQQALGMFLLWLGWFGFNCGSALSITSSDSREIVSIVAVNTSISPVVCCLTSVAIEWAYFKNWLHIREQFVMWSSNAVVRQGADREQQDLHSAAVNGILSGLVGITAGCATTDPRLTILCAVVSAFIYHYGYRLQLHHGLDDAMNAVPVHLYCGIWGLFFAALMYSPGRHDTLMRVYGIDESRGGC--GRGDQVAANVAFSVVVLAWSGATSFVLYHVLN 1510 D + + + V LA +DIF++L ILV MQ GFA+ EVG++ + ILIKNI DAS+ W F G RFIG + F L G + DD +L +Y +LF AFA TA T++SG+VA+RV + Y IY+V +F YPVV HW W GW S V + +CGV+DFAGSGVVH G A A ++ R GRF G N++ Q Q LG +LW G S L+I + + + V T+IS +T+V + + W + A A NG+L+GLVG+TAGC+T +P ++ ++S F+Y Y ++ + +DD ++A+PVH +CG WG+F A+L + + +D+ G G G+ VAANV F + V+AW AT L+ +N Sbjct: 15 DYLLQSATLGDVASLAGDMDIFWLLFGAILVFFMQTGFAMLEVGSVSIKNTKNILIKNIGDASLGAICWWLFGYGVALGDTKGRFIG---SNAFALKGSHFEADDGTLTNGYSYAMWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWG-GGWASAWVDEDLLFDCGVIDFAGSGVVHMTGGLAALAAAIVVGPRTGRF--NEDGTANTL------PQQSAVLQTLGTLILWFGXXXXXXVSTLAI--NGLAGVAAKTMVTTTISAAFGAVTTVLLG----------KLNLGYWDAGA----------------ANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYSAAYYGDRVDKCAGAFYGGDGNAVAANVVFILAVIAWVSATCMALFLGIN 431
BLAST of mRNA_E-siliculosus-1a_F_contig1066.471.1 vs. uniprot
Match: A0A7S2QUY7_9STRA (Ammonium transporter n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUY7_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.010e-62 Identity = 164/439 (37.36%), Postives = 223/439 (50.80%), Query Frame = 2 Query: 236 FFILVCTILVLMMQAGFALYEVGTIRRTPVEVILIKNIVDASIAYASWFAVGSMFAGN----GNRFIGWADAGPFLAG----DEYNGDDSSLAYVRFLFSAAFAGTAVTVMSGSVADRVPYLLYGIYAVWTCAFTYPVVAHWAWSEDGWMS--QAVGGIGNCGVLDFAGSGVVHCFAGTATFVWAYLLPDREGRFVGKATGRVNSVNFGYGFALQDRTQQALGMFLLWLGWFGFNCGSALSITSS--DSREIVSIVAVNTSISPVVCCLTSVAIEWAYFKNWLHIREQFVMWSSNAVVRQGADREQQDLHSAAVNGILSGLVGITAGCATTDPRLTILCAVVSAFIYHYGYRLQLHHGLDDAMNAVPVHLYCGIWG-----LFFAALMYSPGRHDT-LMRVYGIDESRGGCGRGDQVAANVAFSVVVLAWSGATSFVLY 1498 F+++ ILV MQ GFA+ EVG + + ILIKN+ DASI W+A G F+ + GN + D FL G ++ G+ S A+ LF AFA TA T++SG+VA+RV + Y +Y+V +F YPVV HW W+ GW S + + +CGV DFAGSGVVH A V A ++ R GRF + G Q Q LG +LW+GW+GFN S L+I +S D + V T++S CCLT+VAI + S + V+ GA A NGIL+GLV ITAGC++ + IL ++ AF Y G +DD + AVPVH +CGIWG LF + L YS + + GI E G G +AANV F + V+ W G TS +L+ Sbjct: 43 FWLMFGAILVFFMQCGFAMLEVGMVNIKNTKNILIKNVFDASIGAICWWAFGWGFSNSTPTHGNNWSVIGDDNFFLNGISSTEDPAGNGSKAAW---LFQWAFAATAATIVSGAVAERVTFGCYIVYSVVLTSFIYPVVVHWGWNTYGWASAWRESELLFDCGVTDFAGSGVVHLCGAVAALVGAKVVGPRIGRF-----------DEGIKLPQQSVVFQTLGTLILWMGWYGFNGASTLAIGTSTGDLSGAAAHTMVTTTLSAASCCLTTVAIT--------------ALMSKDKVIDIGA----------ANNGILAGLVSITAGCSSVECYAAILIGIIGAFWYVAGCAFLEKLKIDDVVGAVPVHGFCGIWGVLAPGLFASELQYSAAYYSARAAKCAGIFEG----GDGSMLAANVVFIIAVILWVGITSTLLF 439
BLAST of mRNA_E-siliculosus-1a_F_contig1066.471.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI) HSP 1 Score: 225 bits (574), Expect = 7.300e-62 Identity = 157/460 (34.13%), Postives = 229/460 (49.78%), Query Frame = 2 Query: 182 VDAGEIPSVKDLAESIDIFFILVCTILVLMMQAGFALYEVGTIRRTPVEVILIKNIVDASIAYASW--FAVGSMFAGNGNRFIG---WADAGPFLAGDEYNGDDSSLAYVRFLFSAAFAGTAVTVMSGSVADRVPYLLYGIYAVWTCAFTYPVVAHWAWSEDGWMSQAVGG----IGNCGVLDFAGSGVVHCFAGTATFVWAYLLPDREGRFVGKATGRVNSVNFGYGFALQDRTQQALGMFLLWLGWFGFNCGSALSITSSDSREIVSIVAVNTSISPVVCCLTSVAIEWAYFKNWLHIREQFVMWSSNAVVRQGADREQQDLHSAAVNGILSGLVGITAGCATTDPRLTILCAVVSAFIYHYGYRLQLHHGLDDAMNAVPVHLYCGIWGL---------FFAALMYSPGRHDTLMRV-YGIDESRGGCGRGDQVAANVAFSVVVLAWSGATSFVLYHV 1504 +D EI S D+A ++D ++L+ +V MQAGFA+ EVG++ + ILIKNI D+++ W F G F + F+G +A G L G GD +L+Y +LF FA +A T++SG++A+R + Y +++ +F YP+VAHWAWS+ GW S + + CGV DFAGSGVVH G A + ++L R GRF G N++ Q Q LG F+LW GW GFN GS S ++ + ++ V +T + + L + Q W + + A+NGIL+GLV ITAG T +P + V+ +Y + L L + LDD +NA PVHL+ G+WGL F A+ YS R DT + YG G G +AAN+ F + VLAW G + +L+ V Sbjct: 1 MDTAEI-SATDVALAVDTAWVLLGAAMVFFMQAGFAMLEVGSVSIKNTKNILIKNIGDSAMGAIGWWLFGNGLAFGRDSGGFVGVTGFALKGEDLYGTS-TGDFDALSYANWLFQWTFAASATTIVSGAMAERATFGAYVLHSFLLTSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGVTDFAGSGVVHMTGGMAALMGIFILGPRAGRF--NEDGTSNTM------PQQSAVLQTLGTFMLWWGWLGFNAGSVSSFVATPA------------VAAKVMGVTVIGGASGGITSLLVNKLQCGYWDTGS----------------ALNGILTGLVSITAGSGTYEPEGAFVVGVLGGVLYFFASNLLLRNHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFAYAMAYSEDRSDTCAGILYG--------GSGGTLAANIVFLMAVLAWVGLLTLLLFVV 414 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1066.471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1066.471.1 >prot_E-siliculosus-1a_F_contig1066.471.1 ID=prot_E-siliculosus-1a_F_contig1066.471.1|Name=mRNA_E-siliculosus-1a_F_contig1066.471.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=514bp MGDASVDAGEIPSVKDLAESIDIFFILVCTILVLMMQAGFALYEVGTIRRback to top mRNA from alignment at E-siliculosus-1a_F_contig1066:18715..25869- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1066.471.1 ID=mRNA_E-siliculosus-1a_F_contig1066.471.1|Name=mRNA_E-siliculosus-1a_F_contig1066.471.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7155bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1066:18715..25869- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1066:18715..25869- >mRNA_E-siliculosus-1a_F_contig1066.471.1 ID=mRNA_E-siliculosus-1a_F_contig1066.471.1|Name=mRNA_E-siliculosus-1a_F_contig1066.471.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3084bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1066:18715..25869- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |