mRNA_E-siliculosus-1a_F_contig10656.466.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10656.466.1 vs. uniprot
Match: D7FU18_ECTSI (Phospholipid-transporting ATPase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU18_ECTSI) HSP 1 Score: 249 bits (636), Expect = 3.220e-74 Identity = 122/124 (98.39%), Postives = 124/124 (100.00%), Query Frame = 1 Query: 1 VMGAHEPNPEAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGAGEDGGSCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMSSLE 372 VMGAHEPNP+AKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGAG+DGGSCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMSSLE Sbjct: 117 VMGAHEPNPQAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGAGDDGGSCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMSSLE 240
BLAST of mRNA_E-siliculosus-1a_F_contig10656.466.1 vs. uniprot
Match: A0A6H5KPG5_9PHAE (P-type phospholipid transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG5_9PHAE) HSP 1 Score: 248 bits (632), Expect = 1.120e-73 Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 Query: 4 MGAHEPNPEAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGAGEDGGSCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMSSLE 372 MGAHEPNPEAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGA EDGGSCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMSSLE Sbjct: 1 MGAHEPNPEAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGASEDGGSCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMSSLE 123
BLAST of mRNA_E-siliculosus-1a_F_contig10656.466.1 vs. uniprot
Match: A0A836CFX1_9STRA (Phospholipid-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX1_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.530e-36 Identity = 74/122 (60.66%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 1 VMGAHEPNPEAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGAGEDGG-SCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMS 363 ++ EP+P A AGICYVETKSLDGETNLKIRQ + +G V +A AL+GRVVMEHPN+LI+NF+GT+ V AG G + I LLLRGC LRNTR +GLVLNTG DTKI+MS Sbjct: 223 LLSVAEPDPAAAAGICYVETKSLDGETNLKIRQVPKGLVGAVRRSAEAGALRGRVVMEHPNRLINNFAGTL-VMAAGRGGAVAAAAPIDAEALLLRGCTLRNTRHALGLVLNTGMDTKIMMS 343
BLAST of mRNA_E-siliculosus-1a_F_contig10656.466.1 vs. uniprot
Match: W4FH78_9STRA (Phospholipid-transporting ATPase n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FH78_9STRA) HSP 1 Score: 137 bits (346), Expect = 3.630e-35 Identity = 71/129 (55.04%), Postives = 90/129 (69.77%), Query Frame = 1 Query: 1 VMGAHEPNPEAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGAGEDGGSCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMSSLE-VSSW 384 ++ HE + + KAGICYVETKSLDGETNLK+RQA+ ST+ V T + +AL GRV E PNK I F+G+ V+ DG + I +N+LLRGC LRNT W+ GLVLNTGPDTKI+ SS + V+ W Sbjct: 183 ILAVHEVDVDHKAGICYVETKSLDGETNLKLRQAMESTL-EVQTEAEVSALHGRVECEQPNKAISRFAGSFFVDQ--HDGYIANDPISIKNILLRGCQLRNTEWMYGLVLNTGPDTKIMQSSAKPVAKW 308
BLAST of mRNA_E-siliculosus-1a_F_contig10656.466.1 vs. uniprot
Match: A0A3R6YRR3_9STRA (PhoLip_ATPase_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YRR3_9STRA) HSP 1 Score: 132 bits (332), Expect = 5.000e-35 Identity = 68/121 (56.20%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 1 VMGAHEPNPEAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGAGEDGGSCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMS 363 ++ HE N KAGICYVETKSLDGETNLK+RQA+ ST+ T D AL GRV E PNK+I F+G+ V+ DG + I +N+LLRGC LRNT W+ GLV+NTGPDTKI+ S Sbjct: 140 ILAVHEVNAAHKAGICYVETKSLDGETNLKLRQAMESTL-HAQTEADIHALHGRVECEVPNKVISRFNGSFFVDLL--DGSVANDPISIKNILLRGCQLRNTEWMYGLVINTGPDTKIMQS 257
BLAST of mRNA_E-siliculosus-1a_F_contig10656.466.1 vs. uniprot
Match: A0A397D2J7_9STRA (Phospholipid-transporting ATPase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D2J7_9STRA) HSP 1 Score: 137 bits (344), Expect = 5.890e-35 Identity = 71/129 (55.04%), Postives = 89/129 (68.99%), Query Frame = 1 Query: 1 VMGAHEPNPEAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGAGEDGGSCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMSSLE-VSSW 384 ++ HE + + KAGICYVETKSLDGETNLK+RQA+ ST+ V T + +AL GRV E PNK I F+G+ V+ DG I +N+LLRGC LRNT W+ GLVLNTGPDTKI+ SS + V+ W Sbjct: 204 ILAVHEVDVDHKAGICYVETKSLDGETNLKLRQAMESTL-EVQTEAEVSALHGRVECEQPNKAISRFAGSFFVDQ--HDGYIANHPISIKNILLRGCQLRNTEWMYGLVLNTGPDTKIMQSSAKPVAKW 329
BLAST of mRNA_E-siliculosus-1a_F_contig10656.466.1 vs. uniprot
Match: A0A6G0X306_9STRA (Phospholipid-transporting ATPase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X306_9STRA) HSP 1 Score: 136 bits (343), Expect = 9.200e-35 Identity = 70/129 (54.26%), Postives = 88/129 (68.22%), Query Frame = 1 Query: 1 VMGAHEPNPEAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGAGEDGGSCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMSSLE-VSSW 384 ++ HE +P+ KAGICYVETKSLDGETNLK+RQA+ ST+ T + L GRV E NK I F+G+ V+ A DG + I +N+LLRGC LRNT W+ GLVLNTGPDTKI+ SS + V+ W Sbjct: 165 ILAVHEVDPDHKAGICYVETKSLDGETNLKLRQAMESTL-EAQTEHEVLQLHGRVECEQSNKAISRFTGSFFVDQA--DGSIVNDPISIKNILLRGCQLRNTEWMYGLVLNTGPDTKIMQSSAKPVTKW 290
BLAST of mRNA_E-siliculosus-1a_F_contig10656.466.1 vs. uniprot
Match: A0A485KCV2_9STRA (Phospholipid-transporting ATPase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCV2_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.340e-34 Identity = 66/122 (54.10%), Postives = 86/122 (70.49%), Query Frame = 1 Query: 1 VMGAHEPNPEAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGAGEDGGSCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMSS 366 ++ EP+P +GICYVETKSLDGETNLK+RQA+ +T+G + D +KG VV E PN I+ F+G I+V AG+D +E + +N+LLRGC LRNT WV GLVLNTG DTKI+ S+ Sbjct: 199 ILSVEEPDPSVPSGICYVETKSLDGETNLKLRQALPATMGTLRETHDLDKIKGTVVCETPNPYINKFAGNIDVWVAGQDWP--KEPLSIKNILLRGCTLRNTDWVYGLVLNTGSDTKIMQSA 318
BLAST of mRNA_E-siliculosus-1a_F_contig10656.466.1 vs. uniprot
Match: A0A024TFD6_9STRA (Phospholipid-transporting ATPase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFD6_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.350e-34 Identity = 70/129 (54.26%), Postives = 88/129 (68.22%), Query Frame = 1 Query: 1 VMGAHEPNPEAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGAGEDGGSCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMSSLE-VSSW 384 ++ HE + + KAGICYVETKSLDGETNLK+RQA+ ST+ T + AL GRV E PNK I F+G+ V+ DG + I +N+LLRGC LRNT W+ GLVLNTGPDTKI+ SS + V+ W Sbjct: 179 ILAVHEVDADHKAGICYVETKSLDGETNLKLRQAMESTLD-AQTEAEVLALHGRVECEVPNKAISRFAGSFFVDLL--DGSVANDPISIKNILLRGCQLRNTEWMYGLVLNTGPDTKIMQSSAKPVAKW 304
BLAST of mRNA_E-siliculosus-1a_F_contig10656.466.1 vs. uniprot
Match: A0A485LPT8_9STRA (Phospholipid-transporting ATPase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPT8_9STRA) HSP 1 Score: 134 bits (336), Expect = 8.080e-34 Identity = 69/121 (57.02%), Postives = 82/121 (67.77%), Query Frame = 1 Query: 1 VMGAHEPNPEAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALKGRVVMEHPNKLIDNFSGTIEVEGAGEDGGSCREVIQTRNLLLRGCVLRNTRWVVGLVLNTGPDTKIVMS 363 ++ HE + KAGICYVETKSLDGETNLK+RQA+ ST+ V T R L GRV E PNK I FSG+ V+ DG + I +N+LLRGC LRNT W+ GLVLNTGPDTKI+ S Sbjct: 169 ILAVHEQDARHKAGICYVETKSLDGETNLKLRQAMESTL-HVQTERQVLDLHGRVECEQPNKAISRFSGSFFVDQP--DGSVLNDPISIKNILLRGCQLRNTEWMYGLVLNTGPDTKIMQS 286 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10656.466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10656.466.1 >prot_E-siliculosus-1a_F_contig10656.466.1 ID=prot_E-siliculosus-1a_F_contig10656.466.1|Name=mRNA_E-siliculosus-1a_F_contig10656.466.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=127bp MGAHEPNPEAKAGICYVETKSLDGETNLKIRQAIRSTIGRVSTPRDAAALback to top mRNA from alignment at E-siliculosus-1a_F_contig10656:778..1791+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10656.466.1 ID=mRNA_E-siliculosus-1a_F_contig10656.466.1|Name=mRNA_E-siliculosus-1a_F_contig10656.466.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1014bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10656:778..1791+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10656:778..1791+ >mRNA_E-siliculosus-1a_F_contig10656.466.1 ID=mRNA_E-siliculosus-1a_F_contig10656.466.1|Name=mRNA_E-siliculosus-1a_F_contig10656.466.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=762bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10656:778..1791+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |