Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 0 |
| Cds size | 423 |
| Model size | 427 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927564.3739684-CDS-E-siliculosus-1a_F_contig1064:20236..20659 | 1622927564.3739684-CDS-E-siliculosus-1a_F_contig1064:20236..20659 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1064 20237..20659 + |
| 1696318588.2799594-CDS-E-siliculosus-1a_F_contig1064:20236..20659 | 1696318588.2799594-CDS-E-siliculosus-1a_F_contig1064:20236..20659 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1064 20237..20659 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1064.455.1 >prot_E-siliculosus-1a_F_contig1064.455.1 ID=prot_E-siliculosus-1a_F_contig1064.455.1|Name=mRNA_E-siliculosus-1a_F_contig1064.455.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=141bp
TREDPGKLQSHSPVISRAIRRQLFTGIHKVSPPQVWTQDPPAGVAYCETT
LLSSRSCCGTTPTAVSFTPEREEEGTNPSISARFKRPGASVPAPLSCRKS
RRVASSFAATTRQARWRSINTTMRQTSHKLALAWEGDTASE back to topmRNA from alignment at E-siliculosus-1a_F_contig1064:20237..20661+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1064.455.1 ID=mRNA_E-siliculosus-1a_F_contig1064.455.1|Name=mRNA_E-siliculosus-1a_F_contig1064.455.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=425bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1064:20237..20661+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACTCGCGAAGACCCCGGGAAACTCCAATCTCACAGTCCCGTCATCTCCCG
CGCGATCCGCAGGCAATTGTTTACTGGGATACACAAGGTTTCGCCGCCCC
AAGTCTGGACTCAGGACCCCCCCGCGGGTGTTGCATATTGCGAGACAACC
TTGCTATCATCGCGATCCTGCTGCGGCACAACACCTACAGCCGTCTCGTT
CACACCAGAGAGAGAGGAGGAGGGTACCAACCCATCTATTTCAGCGCGGT
TTAAGCGTCCCGGAGCCAGTGTCCCCGCTCCCCTCTCCTGTCGGAAGTCG
AGACGGGTTGCAAGCTCTTTCGCGGCGACAACTCGCCAAGCACGTTGGCG
TAGCATAAACACCACTATGCGACAGACATCACACAAACTTGCTCTAGCTT
GGGAGGGGGATACTGCTTCAGAATG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1064:20237..20661+ >mRNA_E-siliculosus-1a_F_contig1064.455.1 ID=mRNA_E-siliculosus-1a_F_contig1064.455.1|Name=mRNA_E-siliculosus-1a_F_contig1064.455.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=846bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1064:20237..20661+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACTCGCGAAGACCCCGGGAAACTCCAATCTCACAGTCCCGTCATCTCCCG
CGCGATCCGCAGGCAATTGTTTACTGGGATACACAAGGTTTCGCCGCCCC
AAGTCTGGACTCAGGACCCCCCCGCGGGTGTTGCATATTGCGAGACAACC
TTGCTATCATCGCGATCCTGCTGCGGCACAACACCTACAGCCGTCTCGTT
CACACCAGAGAGAGAGGAGGAGGGTACCAACCCATCTATTTCAGCGCGGT
TTAAGCGTCCCGGAGCCAGTGTCCCCGCTCCCCTCTCCTGTCGGAAGTCG
AGACGGGTTGCAAGCTCTTTCGCGGCGACAACTCGCCAAGCACGTTGGCG
TAGCATAAACACCACTATGCGACAGACATCACACAAACTTGCTCTAGCTT
GGGAGGGGGATACTGCTTCAGAAACTCGCGAAGACCCCGGGAAACTCCAA
TCTCACAGTCCCGTCATCTCCCGCGCGATCCGCAGGCAATTGTTTACTGG
GATACACAAGGTTTCGCCGCCCCAAGTCTGGACTCAGGACCCCCCCGCGG
GTGTTGCATATTGCGAGACAACCTTGCTATCATCGCGATCCTGCTGCGGC
ACAACACCTACAGCCGTCTCGTTCACACCAGAGAGAGAGGAGGAGGGTAC
CAACCCATCTATTTCAGCGCGGTTTAAGCGTCCCGGAGCCAGTGTCCCCG
CTCCCCTCTCCTGTCGGAAGTCGAGACGGGTTGCAAGCTCTTTCGCGGCG
ACAACTCGCCAAGCACGTTGGCGTAGCATAAACACCACTATGCGACAGAC
ATCACACAAACTTGCTCTAGCTTGGGAGGGGGATACTGCTTCAGAA back to top
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