mRNA_E-siliculosus-1a_F_contig1063.448.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1063.448.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 461 bits (1187), Expect = 3.570e-150 Identity = 392/535 (73.27%), Postives = 431/535 (80.56%), Query Frame = 2 Query: 245 DRSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGARGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAARGAEEATTALVMAGARPNVVNLGEFGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMKVFLDKDSSNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKTGNNYF--TPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRIRQMLARAPAERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSSQGCSG---KVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL*VQGRGRSDVLFSSQT*LSDSLCQVVATELFGW 1834 DR+RVDGFEVEIFKLVQREAT +QWKEWLRAPLEH AA GNL LFTRLMDAGA EAGWRGC GRTLLGAAA K+ K++RALLT GAKSDVNVLFGAK ESALH+AAARGAEEA+ AL++AGA PN+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TI+K FLD D+S VNATD+ G+TALHH A + RD GDAVRVLL AGADV+AKT +++ PLH+A RV S GTIRALLEGGA+ N R+ D TPLH AC SVAAVELLL WGADEKLTD+ TPAD+I + + +IEAD QRI QMLARAPA+RSWRRR WLVLSR CP RV+IAN SGS +GSS +G K+AR SG+ SGG + ETED MMV RGLV R+VGLEADGLFRLVVGFL RGR+ VLF+S LSDS Q +AT+L W Sbjct: 12 DRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL---KRGRNGVLFTSLPQLSDSSRQALATKLVLW 543
BLAST of mRNA_E-siliculosus-1a_F_contig1063.448.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 442 bits (1136), Expect = 5.130e-143 Identity = 352/502 (70.12%), Postives = 389/502 (77.49%), Query Frame = 2 Query: 245 DRSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGARGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAARGAEEATTALVMAGARPNVVNLGEFGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----ATIMKVFLDKDSSNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAK-TGNNYFTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRIRQMLARAPAERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSSQGCSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL 1735 DRSR+ GFE+EIFKL++REAT EQWKEWLRAPLEH AA+GNLDLFTRLMDAGA EAGWRGCHGRTLLGAAA G+S+K+IR LLT GA DVNVLFG + ESALHVAAARGA++ AL++AGA PNV + P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A ++K LDK SS V+ ++LGW ALH+VAS RD GDAVRVLL AGADVN K T ++ TPLH+A ++ + S GTI ALLEGGAN N R D+TPLH+AC + VELLL WGADEKL +NDGDTPADV+ E+ND +EE EADNQRI +MLARAPA+RSWRRRGWLVLSR CP RV IANG SS S I G S KVARVSG GS DDEETED MMV R LVGR+VGLEA+GLFRLVVGFL Sbjct: 10 DRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_E-siliculosus-1a_F_contig1063.448.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 402 bits (1032), Expect = 5.000e-128 Identity = 261/502 (51.99%), Postives = 301/502 (59.96%), Query Frame = 2 Query: 245 DRSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGARGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAARGAEEATTALVMAGARPNVVNLGEFGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMKVFLDKDSSNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAK-TGNNYFTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRIRQMLARAPAERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSS----QGCSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL 1735 DRSR+DGFE+EIFKLVQR AT EQWKEWLRAP EH AA+GNLD FTRLMDAGA AGWRGC+GRTLLGAAAFG+S+K++R LT GA DVNVLFG + E AL++ GA PNV + + PL XXXXXXXXXXXX A ++K LDKDS V+ATD GW ALH+ AS+ GP RDNGDAVRVLL AGADV+AK T + T L++A ++R+AS GTIRALLEGGAN N R D+TPLH+AC S VELLL WGAD+KLT N G TPA V+ A +++D +EE+EADNQRIR+MLAR PA RSWRRRGWLVLSR CP RVQIANG S G S KVA+VSG+ S DDEET DDMMV R LVGR++ LEADG+FRLVVGFL Sbjct: 10 DRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGERE----------------ALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXXALCISELLLGANSHLEAVQELLAAGANYSLRTNGSRSPLEIAANRGQ-------------------ADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
BLAST of mRNA_E-siliculosus-1a_F_contig1063.448.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 386 bits (991), Expect = 1.480e-121 Identity = 345/499 (69.14%), Postives = 397/499 (79.56%), Query Frame = 2 Query: 248 RSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGA-RGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAARGAEEATTALVMAGARPNVVNLGEFGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMKVFLDKDSSNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKTGNNY--FTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRIRQMLARAPAERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSSQGCSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL 1735 RSR+DGFE+EIFKLVQ E T EQWK+WL+ PLEH AA+GNLDLFTRLMDAG GE GWRGC+GRTLLGAAA+GKSDKV+RALL GA DVNVLFG + +SALHVAAARGAEEA+ AL++AGA PN+ + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+ D+ G+TA+H + GP DNG VR+LLEAG VNA+TG ++ +TPLH A +R+AS+ T ALLEGGAN+N TPLH+ACM +VAAVELLL WGADE ++++GD PADVI + D +E+++AD++RIR+MLARAPA+RSWRRRGWLVLSR CP RVQIAN GS + + C KVARVSG+ GGD+EE E+ M V W GLVG ++GLEADGLFRLVVGFL Sbjct: 12 RSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-VDTGDDQGYTAIHCAVNRHGPL-DNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIAN---KGSRVNRNS-CPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_E-siliculosus-1a_F_contig1063.448.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 322 bits (826), Expect = 3.750e-90 Identity = 235/520 (45.19%), Postives = 290/520 (55.77%), Query Frame = 2 Query: 239 RRDRSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGARGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAAR-------------------GAEEATTALVMAGARPNVVNLGEFGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMKVFLDKDSSNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKTGNNYF--TPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRIRQMLARAPAERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSSQGCSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL 1735 R DRS +DGFEVEI +LV+ AT EQW++WLR PLEH AAKGNLDLFTRLMDAG+ GE GWRGC+GRTLLGA A+G+S+K++RALL G D NV F A+ +SALHVAAAR G + + L++ GA + PLXXXXXXXXXXXXXXXXX ATI+K FL+ +V+ TD+ +T LH A + +G V VLLEAGADVNAKT N F TPLH+A +RV+S+ TIRA ++ ++TPLH+AC + A V+LLL WGAD ++ +G PADVI A +E+ +E IEAD++ +R+MLARAPA++SWRR GWLVLSR P RVQI N SGS S CS K+ARVSG S DDE E+ MMV WR L+ R+VGLEADGLFRL+VGFL Sbjct: 8 REDRSHLDGFEVEIVELVREGATSEQWRQWLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYDRNVRFSAEGKSALHVAAARDPNLPACKGYHALHVAAERGHDRVISLLLLKGAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLGGAHTDVAERHPTNSSGRWKCFWLPVPTGGRPDNGGWSSLPNAVCCGH-----------------------------------------ATIVKAFLET-GIDVDTTDDQAYTVLHRAADM------DGCVVHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVIRAHDEDGLDDEHIEADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQIGNRGGSGS----SNSCSTKLARVSGKDSSRDDE-LENQMMVDWRVLLDRLVGLEADGLFRLMVGFL 474
BLAST of mRNA_E-siliculosus-1a_F_contig1063.448.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 281 bits (718), Expect = 3.190e-78 Identity = 205/505 (40.59%), Postives = 244/505 (48.32%), Query Frame = 2 Query: 245 DRSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGARGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAARGAEEATTALVMAGARPNVVNLGE----FGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMKVFLDKDSSNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKTGNNYF-TPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRIRQMLARAPAERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSS-------QGCSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLV 1723 DRSRVDGF++EIFKLVQREAT EQWKEWLRAPLEH AAK L T + W S+K++R LLT GA D NVLFG +HESALHV ARGAE++ AL++AGA P + + G+ F + A ++ LDKD+ + SV GP DNGDAVR LL GADVNAKT ++ +PLH+A +R+AS G I D PLHLAC SV VELLL WGADEKLT++ G TPADVI A ++ D ++E EAD+QRI +M+A PA+RSWRRRGWLVLSR CP RVQIANG S G + KVARVSG+ S DDE TE DM+V R LVGR+VGLEADGL RLV Sbjct: 10 DRSRVDGFKIEIFKLVQREATSEQWKEWLRAPLEHAAAKELGSLHTA--------DGHW----------------SEKMVRTLLTAGATDDANVLFGVEHESALHVVLARGAEDSCRALMIAGADPTLRDRGDDTRWFKEMDTRIFNMTSVIERIWVAAVAGHHRVIGSLLLNRADVHAKTASQSTPLHLAASEGRALCLSELLLGANNHLEAVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGH--ADVLTALLDKDN-------------IFFAMSVDGPVHDNGDAVRALLGVGADVNAKTTDSICASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVIRALQQGDLDDKEREADDQRIGRMVALVPADRSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXXRINGNAAKVARVSGESSSRDDERTEGDMIVDLRNLVGRLVGLEADGLLRLV 475
BLAST of mRNA_E-siliculosus-1a_F_contig1063.448.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE) HSP 1 Score: 261 bits (667), Expect = 2.720e-77 Identity = 153/243 (62.96%), Postives = 180/243 (74.07%), Query Frame = 2 Query: 1010 SSNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKTG-NNYFTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRIRQMLARAPAERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSSQGCSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL 1735 +S+VNAT++LG ALH+ ASV GP D GDAVRVLL AG DVN T ++ FTPLHVA R+AS GTIRALLEG A+ + R + D+TPLH+AC SV+ VELLL WGADE+LT+N GD PADVI A ++ D +EE +ADNQRI +ML RAPA+RSWRRRGWLVLSR CP RVQI NG SS GS G S KVA +SG+ +G DEETED +M R LV +VGLEAD LFRLVV FL Sbjct: 32 NSDVNATNDLGLAALHYAASVVGPVHDKGDAVRVLLGAGVDVNVNTTTDSCFTPLHVAVDGRIASDGTIRALLEG-ADVDSRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRARQQGDLDDEEHDADNQRICRMLTRAPADRSWRRRGWLVLSRYCPTRVQIDNGSSS---RGSYNGNSAKVATLSGEDTGRGDEETEDRIMADLRDLVDWLVGLEADSLFRLVVAFL 270
BLAST of mRNA_E-siliculosus-1a_F_contig1063.448.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE) HSP 1 Score: 258 bits (660), Expect = 2.540e-76 Identity = 153/259 (59.07%), Postives = 178/259 (68.73%), Query Frame = 2 Query: 1010 SSNVNATDNLGWTALHH-VASVGGPSRDNGDAVRVLLEAGADVNAKT--GNNYFTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPA------------DVIEAPEENDNTEEEIEADNQRIRQMLARAPAERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSSQG--CSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL 1735 SS V+ATD+ G+TALH V + P DNGD VRVLLEAGADV+AKT N TPLH A ++R+A +G IRALLEGGAN N R+ D+TPLH+AC SV VE LL WGADEKLTD DG+TPA DV +AP EN +E IEAD RIRQMLARAPA+RSW RR WLVLSR CP +VQI+N SS ++ S G S ++ V+ GGDD+ETED V WR LV R+VGLEAD LFRLVVGFL Sbjct: 9 SSEVHATDDGGYTALHCCVCDINEPVLDNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVLSRSCPTKVQISNTSSSSNISSGSSGDGLSAEMVSVNCKDLGGDDKETEDQKTVNWRDLVVRLVGLEADVLFRLVVGFL 267
BLAST of mRNA_E-siliculosus-1a_F_contig1063.448.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI) HSP 1 Score: 253 bits (646), Expect = 2.340e-72 Identity = 219/393 (55.73%), Postives = 250/393 (63.61%), Query Frame = 2 Query: 233 ETRRDRSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGARGEAGWRGC--HGRTLLGAAAFG-KSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAARGAEEATTALVMAGARPNVVNLGEFGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ATIMKVFLDKDSSNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKT----GNNYFTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVI 1384 E DRSRVDGFE+EIFKLV+ EAT +QWK+WLR PLEH AAKGNLDLFTRL+DAGA GE GW+G RTLLGAAA G KSD +++ALL G VN FGA ESALHV ARGAE+A+ AL+MAGA PN+ N+ PL XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A ++K FLDKDS V+ATD GWTALH+ A V DNGDAVR LLEAGADVN KT ++ FTPLHVA ++R+AS+ I ++TPLH+ACM +V+ VELLL WGADE L ++ DTPAD I Sbjct: 5 EREEDRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAKGNLDLFTRLIDAGAGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVDGDSPLHLAAEAGHHRVIGILLLRKEAQSADPMNLFLETXXXXXXXXXXXLCISELLMGGADKDVTDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGNAAMLKAFLDKDSREVDATDGRGWTALHYAAYVDRSVHDNGDAVRALLEAGADVNVKTDAHASDDIFTPLHVAVNRRMASICMIXXXXXXXXXXXXXXXCNQTPLHVACMWGNVSGVELLLRWGADEMLKNHRADTPADEI 397
BLAST of mRNA_E-siliculosus-1a_F_contig1063.448.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI) HSP 1 Score: 231 bits (588), Expect = 9.250e-66 Identity = 123/189 (65.08%), Postives = 142/189 (75.13%), Query Frame = 2 Query: 977 ATIMKVFLDKDSSNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKTGNNY-FTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEEND-NTEEEIEADNQRIRQMLARAPAERSWRRRGWLVLSRCCPARVQI 1537 A ++K LDKDSS ++ TD GW ALH+ A V GP RDNGDAVRVLL AGADVN N+ FTPLH+A + R S GT+RALLEGG+N + R LD+TPLH+AC SV VELLL WGADEKLT+N G TPADVI +ND + EEE EADNQRIR+ML APA+RSWRRRGWLVLSR CP RV+I Sbjct: 96 ADVLKALLDKDSSQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNNNDSCFTPLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVIRPRRQNDFDDEEEREADNQRIRRMLEHAPADRSWRRRGWLVLSRSCPTRVEI 284 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1063.448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1063.448.1 >prot_E-siliculosus-1a_F_contig1063.448.1 ID=prot_E-siliculosus-1a_F_contig1063.448.1|Name=mRNA_E-siliculosus-1a_F_contig1063.448.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=450bp MDAGARGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAback to top mRNA from alignment at E-siliculosus-1a_F_contig1063:28648..32047+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1063.448.1 ID=mRNA_E-siliculosus-1a_F_contig1063.448.1|Name=mRNA_E-siliculosus-1a_F_contig1063.448.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3400bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1063:28648..32047+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1063:28648..32047+ >mRNA_E-siliculosus-1a_F_contig1063.448.1 ID=mRNA_E-siliculosus-1a_F_contig1063.448.1|Name=mRNA_E-siliculosus-1a_F_contig1063.448.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2700bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1063:28648..32047+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |