mRNA_E-siliculosus-1a_F_contig1063.447.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match: D8LQE9_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE9_ECTSI) HSP 1 Score: 243 bits (619), Expect = 5.560e-78 Identity = 125/142 (88.03%), Postives = 126/142 (88.73%), Query Frame = 1 Query: 1 MSASKGDRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDLGNFED 426 MSASKGDRSRVDG EIEIFKLV + QWLRTPLEHAAAKGNLDLFTRLMDAGAGGEP WRGWGC RTLLGAAACGTKSDKMI ALLEAG TDDVNAVFGTE ESALHVSAARGAEEASKALMAAGADPDLGNFED Sbjct: 1 MSASKGDRSRVDGFEIEIFKLVKEEATAGQWKQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPGWRGWGCHERTLLGAAACGTKSDKMIWALLEAGVTDDVNAVFGTERESALHVSAARGAEEASKALMAAGADPDLGNFED 142
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI) HSP 1 Score: 197 bits (501), Expect = 8.110e-58 Identity = 104/143 (72.73%), Postives = 115/143 (80.42%), Query Frame = 1 Query: 1 MSASKG--DRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDLGNFE 423 MSAS+ DRSRVDG EIEIFKLV + QWLRTPLEHAAAKGNLDLFTRL+DAGAGGEP W+GWG R RTLLGAAACG KSD M++ALLEAG T+ VN FG ESALHV+ ARGAE+ASKALM AGADP+LGN + Sbjct: 1 MSASEREEDRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAKGNLDLFTRLIDAGAGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVD 143
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match: D8LQE2_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE2_ECTSI) HSP 1 Score: 175 bits (443), Expect = 4.070e-52 Identity = 93/137 (67.88%), Postives = 102/137 (74.45%), Query Frame = 1 Query: 13 KGDRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDLGNFE 423 KG RSR+DG EIEIFKLV + QW R PLEHA A+GNLDLFTRLMDAGA GE WRG C RTLLGAAACG SDKM+RALLEAGA DVN FG +ES LHVSAARGAE + ALM AGADP+L ++E Sbjct: 7 KGHRSRLDGFEIEIFKLVKEEAAPEQWKQWFRAPLEHATARGNLDLFTRLMDAGADGEAGWRG--CHGRTLLGAAACGNNSDKMVRALLEAGARRDVNVRFGNTNESTLHVSAARGAEASCTALMIAGADPNLRDWE 141
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 169 bits (429), Expect = 2.260e-46 Identity = 96/137 (70.07%), Postives = 107/137 (78.10%), Query Frame = 1 Query: 4 SASKGDRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGA-GGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDL 411 S + RSR+DG EIEIFKLV + QWL+ PLEHAAA+GNLDLFTRLMDAG GGE WRG C RTLLGAAA G KSDK++RALLEAGA DDVN +FG E +SALHV+AARGAEEASKALM AGADP+L Sbjct: 6 SKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRG--CNGRTLLGAAAWG-KSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNL 139
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 162 bits (409), Expect = 3.320e-43 Identity = 88/136 (64.71%), Postives = 102/136 (75.00%), Query Frame = 1 Query: 4 SASKGDRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDL 411 S DR+RVDG E+EIFKLV + +WLR PLEHAAA GNL LFTRLMDAGA E WRG C RTLLGAAAC +K+ K++RALL AGA DVN +FG + ESALH++AARGAEEASKALM AGA+P+L Sbjct: 7 SQQSQDRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRG--CDGRTLLGAAAC-SKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNL 139
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 160 bits (404), Expect = 1.090e-42 Identity = 87/131 (66.41%), Postives = 101/131 (77.10%), Query Frame = 1 Query: 19 DRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDL 411 DRSR+ G EIEIFKL+ + +WLR PLEHAAA+GNLDLFTRLMDAGA E WRG C RTLLGAAA G +S+KMIR LL AGATDDVN +FG E ESALHV+AARGA++ +ALM AGADP++ Sbjct: 10 DRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRG--CHGRTLLGAAALG-RSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNV 137
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match: A0A6H5KQY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY9_9PHAE) HSP 1 Score: 140 bits (352), Expect = 1.840e-36 Identity = 83/143 (58.04%), Postives = 99/143 (69.23%), Query Frame = 1 Query: 1 MSASKG-DRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDLGNFED 426 MS SK DRSRVDG E++IFKLV +WL PL HAAAKG LDLFTRL++AGA G WRG C RTLLG AA + ++M+RA LEAGATDDVN FG +SAL V+AARGAE + ALM AGADP+ +++D Sbjct: 1 MSGSKREDRSRVDGFEMKIFKLVQAEETPEQWKKWLGAPLNHAAAKGKLDLFTRLINAGADGSAGWRG--CHGRTLLGEAA-RSDGNQMVRAFLEAGATDDVNVRFGAISQSALQVAAARGAEGSCSALMIAGADPNWIDYDD 140
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 138 bits (347), Expect = 3.480e-34 Identity = 74/127 (58.27%), Postives = 88/127 (69.29%), Query Frame = 1 Query: 31 VDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDL 411 +DGLE+EIFKLV + +WLR PLEHAAA+GN+DLFTRLMDAGA G WRG C RTLLGAAA G + + R L E GAT+DVN FG ESALHV+A R + S+ L+ AGADP+L Sbjct: 65 LDGLEVEIFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRG--CHGRTLLGAAAYGKNEEIVERLLAEDGATEDVNVCFGDRLESALHVAAGRDDQHLSRVLLIAGADPNL 189
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 137 bits (346), Expect = 1.270e-33 Identity = 74/117 (63.25%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 7 ASKGDRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAAR 357 + + DRS +DG E+EI +LV +G QWLR PLEHAAAKGNLDLFTRLMDAG+ GEP WRG C RTLLGA A G +S+KM+RALLEAG T D N F E +SALHV+AAR Sbjct: 6 SKREDRSHLDGFEVEIVELVREGATSEQWRQWLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRG--CNGRTLLGATAYG-ESEKMVRALLEAGVTYDRNVRFSAEGKSALHVAAAR 119
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 136 bits (342), Expect = 3.930e-33 Identity = 79/131 (60.31%), Postives = 91/131 (69.47%), Query Frame = 1 Query: 1 MSASKGD---RSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKAL 384 MSASK RS +D EIEIFKLV + +WLR PLEHAAA+GNLD FTRLMDAGA E RG C RTLLGA AC +S+KM+R LL GATDDV +FG EHES LHVSAARGAE++ + + Sbjct: 501 MSASKRQEEGRSCLDCFEIEIFKLVQKEATSEQWKEWLRAPLEHAAAEGNLDFFTRLMDAGANVEAGRRG--CHGRTLLGATACD-RSEKMVRTLLTTGATDDVAVLFGVEHESPLHVSAARGAEDSCRVI 628 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1063.447.1 >prot_E-siliculosus-1a_F_contig1063.447.1 ID=prot_E-siliculosus-1a_F_contig1063.447.1|Name=mRNA_E-siliculosus-1a_F_contig1063.447.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=140bp MIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDLback to top mRNA from alignment at E-siliculosus-1a_F_contig1063:27673..28353- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1063.447.1 ID=mRNA_E-siliculosus-1a_F_contig1063.447.1|Name=mRNA_E-siliculosus-1a_F_contig1063.447.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=681bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1063:27673..28353- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1063:27673..28353- >mRNA_E-siliculosus-1a_F_contig1063.447.1 ID=mRNA_E-siliculosus-1a_F_contig1063.447.1|Name=mRNA_E-siliculosus-1a_F_contig1063.447.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=840bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1063:27673..28353- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |