mRNA_E-siliculosus-1a_F_contig1063.445.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1063.445.1 vs. uniprot
Match: D8LQF2_ECTSI (GTR1, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQF2_ECTSI) HSP 1 Score: 625 bits (1613), Expect = 2.540e-215 Identity = 314/319 (98.43%), Postives = 317/319 (99.37%), Query Frame = 2 Query: 239 MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGDMVLNLWDCGGQDSFYETYFNYQQEFIFRSVEVLIYVFDVMSDDVAGDLERYRGVLEAVDRNSSDARVFVLIHKMDLVTEEDREVVFLNRKQVISDVSGGVELTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLDNFCDICGADEVVLFERETFLVIAHATQVRHPDVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVVTTSPLVEKATTELNIKAAKKHFERLLVKPEDLGHHEMDHHHHQPGQVA 1195
MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGDMVLNLWDCGGQDSFYETYFNYQQEFIFRSVEVLIYVFDVMSDDVAGDLERYRGVLEAVDRNSSDARVFVLIHKMDLVTEEDREVVFLNRKQVISDVSGGVELTFFMTSIWDETLY+AWSSIVYSLIPNMEVLESHLDNFCDICGADEVVLFERETFLVIAHA V+HPDVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVVTTSPLVEKATTELNIKAAKKHFERLLVKPEDLGHHEM+HHHHQPGQVA
Sbjct: 1 MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGDMVLNLWDCGGQDSFYETYFNYQQEFIFRSVEVLIYVFDVMSDDVAGDLERYRGVLEAVDRNSSDARVFVLIHKMDLVTEEDREVVFLNRKQVISDVSGGVELTFFMTSIWDETLYRAWSSIVYSLIPNMEVLESHLDNFCDICGADEVVLFERETFLVIAHAKHVQHPDVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVVTTSPLVEKATTELNIKAAKKHFERLLVKPEDLGHHEMNHHHHQPGQVA 319
BLAST of mRNA_E-siliculosus-1a_F_contig1063.445.1 vs. uniprot
Match: A0A835Z771_9STRA (Putative ras-related GTP binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z771_9STRA) HSP 1 Score: 434 bits (1115), Expect = 4.850e-141 Identity = 214/297 (72.05%), Postives = 252/297 (84.85%), Query Frame = 2 Query: 239 MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGDMVLNLWDCGGQDSFYETYFNYQQEFIFRSVEVLIYVFDVMSDDVAGDLERYRGVLEAVDRNSSDARVFVLIHKMDLVTEEDREVVFLNRKQVISDVSGGVELTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLDNFCDICGADEVVLFERETFLVIAHATQVRHPDVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVVTTSPLVEKATTELNIKAAKKHFERLL 1129
M KKKVLLMGKS SGKTSMRSIIFANY A+DT+RL PTLDVEHSHVRFLG++VLNLWDCGGQD+FYE+YF+ Q++ IFR VEVLIYVFD+ S+++ DL + GVLEA+++NS DARVFVLIHKMDLV EE REVVF R+Q++ D S G+ FF TSIWDETLYKAWSSIVYSLIPN+ VLESHLDNFC IC ADEVVLFER TFLVI+HA Q +H D HRFEKISNI+KQFKLSVSKT +F+GM V+NS+FT FI FT NTYIMVV + P ++ ATT+LNI+AA++HFE+ +
Sbjct: 1 MAKKKVLLMGKSGSGKTSMRSIIFANYLARDTMRLSPTLDVEHSHVRFLGNLVLNLWDCGGQDAFYESYFDSQRDLIFRGVEVLIYVFDIESNELEKDLNHFGGVLEAIEQNSPDARVFVLIHKMDLVAEEHREVVFQQRQQLVLDHSRGLAPIFFRTSIWDETLYKAWSSIVYSLIPNINVLESHLDNFCKICDADEVVLFERATFLVISHALQAQHYDAHRFEKISNIIKQFKLSVSKTQAQFQGMEVRNSSFTAFIDSFTANTYIMVVLSDPKIQSATTQLNIRAARRHFEKFV 297
BLAST of mRNA_E-siliculosus-1a_F_contig1063.445.1 vs. uniprot
Match: A0A067CTB0_SAPPC (Ras-like GTP-binding protein A n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CTB0_SAPPC) HSP 1 Score: 396 bits (1017), Expect = 1.430e-126 Identity = 198/295 (67.12%), Postives = 238/295 (80.68%), Query Frame = 2 Query: 245 KKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGDMVLNLWDCGGQDSFYETYFNYQQEFIFRSVEVLIYVFDVMSDDVAGDLERYRGVLEAVDRNSSDARVFVLIHKMDLVTEEDREVVFLNRKQVISDVSGGVELTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLDNFCDICGADEVVLFERETFLVIAHATQVRHPDVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVVTTSPLVEKATTELNIKAAKKHFERLL 1129
KKKVLLMGKS SGKTSMRSIIFANY A+DT+RLGPTLDVEHSHVRFLG++VLNLWDCGGQD+FYE YF Q++ IFRSVE+LIYVFD+ S ++ D+ + G LEA+++NS A+VFVLIHKMDLV E R+ VF RK++I +G + F TSIWDETLY+AWSSIVYSLIPNM+ LE HL+ FC IC ADEVVLFER TFLVIA+AT H D+HRFEKISNI+KQFKLS SKT +F+GM V+NSNFT ++ FT NTYIMV+ + ++ ATT+LNIKAA+ FER +
Sbjct: 2 KKKVLLMGKSGSGKTSMRSIIFANYLARDTMRLGPTLDVEHSHVRFLGNLVLNLWDCGGQDAFYENYFESQRDHIFRSVELLIYVFDIESRELEKDMNHFDGCLEAIEQNSESAKVFVLIHKMDLVPEAQRDAVFEQRKEMILSRTGQIPTVCFGTSIWDETLYRAWSSIVYSLIPNMQDLEHHLNVFCSICNADEVVLFERATFLVIANATHTTHRDMHRFEKISNIIKQFKLSCSKTQAQFQGMEVRNSNFTAYMDFFTTNTYIMVIMSDGSIQAATTQLNIKAARPVFERYV 296
BLAST of mRNA_E-siliculosus-1a_F_contig1063.445.1 vs. uniprot
Match: W7TTY0_9STRA (Ras-related gtp-binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTY0_9STRA) HSP 1 Score: 395 bits (1016), Expect = 2.080e-126 Identity = 198/300 (66.00%), Postives = 238/300 (79.33%), Query Frame = 2 Query: 239 MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGDMVLNLWDCGGQDSFYETYFNYQQEFIFRSVEVLIYVFDVMSDDVAGDLERYRGVLEAVDRNSSDARVFVLIHKMDLVTEEDREVVFLNRKQVISDVSGG---VELTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLDNFCDICGADEVVLFERETFLVIAHATQVRHPDVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVVTTSPLVEKATTELNIKAAKKHFERLL 1129
MGKKKVLLMGKS SGKTSMRS IFANY A+DT+RL PTLDVEH HVRFLG++VLNLWDCGGQD+FYE+YF+ Q++ IFRSVEVLIYVFDV S D DL + GVLEA+D+ S DA++FVLIHKMDLV EEDRE VFL+R+++I ++ +TFF TSIWDETLYKAWS IVY L+PN++ LE L++ C+ICGADE+VLFER TFLVIAHAT H DVHRFEKISNI+KQFKLS KT +F GM V NS FT +I FT NTYIMV+ + + +TT++N+KAA+ FE +
Sbjct: 1 MGKKKVLLMGKSGSGKTSMRSFIFANYMARDTMRLSPTLDVEHHHVRFLGNLVLNLWDCGGQDAFYESYFDSQRDLIFRSVEVLIYVFDVESADTEKDLSHFMGVLEAIDQYSPDAKLFVLIHKMDLVAEEDRESVFLDRQKMILGLATSRFNFTVTFFKTSIWDETLYKAWSGIVYQLVPNVKALEEQLNSLCEICGADEMVLFERATFLVIAHATHAAHSDVHRFEKISNIIKQFKLSCGKTQAQFHGMEVGNSAFTAYIDLFTSNTYIMVILSDSRIHTSTTQINVKAARAAFEAFV 300
BLAST of mRNA_E-siliculosus-1a_F_contig1063.445.1 vs. uniprot
Match: A0A7S2V5Y6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5Y6_9STRA) HSP 1 Score: 394 bits (1012), Expect = 9.630e-126 Identity = 204/304 (67.11%), Postives = 240/304 (78.95%), Query Frame = 2 Query: 239 MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGDMVLNLWDCGGQDSFYETYFNYQQEFIFRSVEVLIYVFDVMSDDVAGDLERYRGVLEAVDRNSSDARVFVLIHKMDLVTEEDREVVFLNRKQVISDVSG--GVELTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLDNFCDICGADEVVLFERETFLVIAHATQVRHPDVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVV-----TTSPLVEKATTELNIKAAKKHFERLL 1129
M KKKVLLMGKS SGKTSMRSIIFANY A+DT+RL PTLDVEH HVRFLG++VLNLWDCGGQD+FYE+YF+ Q++ IFR VEV+IYVFD+ S ++ DL ++GVLEA+++NS DAR+FVLIHKMDLV EE+R+VVF +RK ++ S G +TFF TSIWDETLYKAWSSIVYSLIPN+++LE HL FC IC ADEVVLFE TFLVI+HAT H DVHRFEKISNI+KQFKLS SKT +F GM V NS FT FI T NTYIMVV + A T+LNI+AA+KHFER +
Sbjct: 1 MAKKKVLLMGKSGSGKTSMRSIIFANYLARDTMRLSPTLDVEHCHVRFLGNLVLNLWDCGGQDAFYESYFDSQRDLIFRGVEVVIYVFDIESAELDKDLHHFQGVLEAIEQNSPDARMFVLIHKMDLVAEEERDVVFEDRKALVLQHSRDMGSLMTFFRTSIWDETLYKAWSSIVYSLIPNIDILERHLKEFCKICDADEVVLFESATFLVISHATATDHYDVHRFEKISNIIKQFKLSCSKTLAQFRGMEVCNSRFTAFIDLLTTNTYIMVVLGDQGSNGGAAATAATQLNIQAARKHFERFI 304
BLAST of mRNA_E-siliculosus-1a_F_contig1063.445.1 vs. uniprot
Match: F0VZ80_9STRA (Rasrelated GTPbinding protein putative n=14 Tax=Oomycota TaxID=4762 RepID=F0VZ80_9STRA) HSP 1 Score: 393 bits (1009), Expect = 2.160e-125 Identity = 194/295 (65.76%), Postives = 236/295 (80.00%), Query Frame = 2 Query: 245 KKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGDMVLNLWDCGGQDSFYETYFNYQQEFIFRSVEVLIYVFDVMSDDVAGDLERYRGVLEAVDRNSSDARVFVLIHKMDLVTEEDREVVFLNRKQVISDVSGGVELTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLDNFCDICGADEVVLFERETFLVIAHATQVRHPDVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVVTTSPLVEKATTELNIKAAKKHFERLL 1129
KKKVLLMGKS SGKTSMRSIIFANY A+DT+RLGPTLDVEHSHVRFLG++VLNLWDCGGQD+FYE YF Q++ IFRSVE+LIYVFD+ S ++ D+ + G LEA+D+NSS+A+VFVLIHKMDLV EE R+ + +K++I +G + F TSIWDETLY+AWSSIVYSLIPN++ LE HLD FC IC ADEVVLFER TFLVI+HA H D+HRFEKISNI+KQFKLS SKT +F+GM V+NSNFT +I FT NTYIM++ + ++ A LNIK+A+ FER +
Sbjct: 2 KKKVLLMGKSGSGKTSMRSIIFANYLARDTMRLGPTLDVEHSHVRFLGNLVLNLWDCGGQDAFYENYFESQRDHIFRSVELLIYVFDIESREIDKDMAHFEGCLEAIDQNSSNAKVFVLIHKMDLVPEEKRQRILEQKKEMILTRTGSLPTICFGTSIWDETLYRAWSSIVYSLIPNIQDLEKHLDGFCTICDADEVVLFERATFLVISHAAHANHRDIHRFEKISNIIKQFKLSCSKTQAQFQGMEVRNSNFTAYIDFFTTNTYIMIIVSDQQIQPAGIHLNIKSARPLFERYV 296
BLAST of mRNA_E-siliculosus-1a_F_contig1063.445.1 vs. uniprot
Match: A0A6V1W998_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1W998_HETAK) HSP 1 Score: 390 bits (1002), Expect = 2.670e-124 Identity = 195/301 (64.78%), Postives = 235/301 (78.07%), Query Frame = 2 Query: 239 MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGDMVLNLWDCGGQDSFYETYFNYQQEFIFRSVEVLIYVFDVMSDDVAGDLERYRGVLEAVDRNSSDARVFVLIHKMDLVTEEDREVVFLNRKQVISDVSGGV--ELTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLDNFCDICGADEVVLFERETFLVIAHATQVRHPDVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVVTTSPLVEKATTELNIKAAKKHFERLLVK 1135
M KKKV+LMGKS SGKTSMRSIIFANY A+DT+RL PTLDVEHS VRFLG +VLNLWDCGGQD+FYE+YF+ Q++ IFR VEVLIYVFD+ S ++ D Y GVLEA+++NS DA+VF+L+HKMDLV EE+R+ VF R+++I+ SG LT F TSIWDETLYKAWSSIVYSLIPN+ +LE HL +FC++CGADEVVLFE TFLVI+HAT H D HRFEK+SNI+KQFKLS SKT F GM V+NS F + TENTY+MVV P V T LNI+ A++HFE+ + K
Sbjct: 1 MTKKKVILMGKSGSGKTSMRSIIFANYLARDTMRLSPTLDVEHSDVRFLGGLVLNLWDCGGQDAFYESYFDSQRDLIFRGVEVLIYVFDIESAELEKDFAHYEGVLEAMEQNSPDAKVFILVHKMDLVAEEERDAVFDGRRRLIAGRSGDFAPRLTCFATSIWDETLYKAWSSIVYSLIPNVALLERHLRDFCEVCGADEVVLFESATFLVISHATTQEHYDPHRFEKVSNIIKQFKLSCSKTHASFRGMEVRNSRFAAHVDALTENTYVMVVQGDPAVRTDATRLNIEVARRHFEKFIPK 301
BLAST of mRNA_E-siliculosus-1a_F_contig1063.445.1 vs. uniprot
Match: A0A7S2VWM1_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWM1_9STRA) HSP 1 Score: 382 bits (982), Expect = 2.350e-121 Identity = 191/298 (64.09%), Postives = 235/298 (78.86%), Query Frame = 2 Query: 245 KKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGDMVLNLWDCGGQDSFYETYFNYQQEFIFRSVEVLIYVFDVMSDDVAGDLERYRGVLEAVDRNSSDARVFVLIHKMDLVTEEDREVVFLNRKQVISDVSGGVELTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLDNFCDICGADEVVLFERETFLVIAHATQVRHP-----DVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVVTTSPLVEKATTELNIKAAKKHFER 1123
KKKVLLMGK+ SGKTSMRSIIFANY A+DT+RL PTLDVEH HVRFLG++VLNLWDCGGQD+FYE+YF +E IFRSVE+LIYVFD+ S+D D + + GVLEA++ NS DAR+FVL+HKMDLV + +R ++F +R+++I S G+ L F TSIWDETLYKAWS IV +LIPN+++L+S LDNFC I ADEVVLFER TFLVIAH +Q + D HRFEKISNIVKQFKLS KT +F+G+ V+NS F+ FI FT NTYIMV+ + P +E A T +NIK AK+HFE+
Sbjct: 2 KKKVLLMGKAHSGKTSMRSIIFANYLARDTMRLSPTLDVEHHHVRFLGNLVLNLWDCGGQDAFYESYFERDRETIFRSVELLIYVFDIESEDPEKDFDHFSGVLEAIEENSPDARIFVLVHKMDLVHDSERSMIFEDRRRIIEAHSRGLSLECFATSIWDETLYKAWSEIVTNLIPNIQLLKSQLDNFCRISDADEVVLFERATFLVIAHTSQTDNSQHTNFDAHRFEKISNIVKQFKLSCGKTQAQFQGLQVQNSQFSAFIDAFTANTYIMVIVSDPEIETAATLINIKNAKQHFEK 299
BLAST of mRNA_E-siliculosus-1a_F_contig1063.445.1 vs. uniprot
Match: D2UXE0_NAEGR (Predicted protein n=3 Tax=Naegleria TaxID=5761 RepID=D2UXE0_NAEGR) HSP 1 Score: 380 bits (975), Expect = 3.820e-120 Identity = 185/295 (62.71%), Postives = 234/295 (79.32%), Query Frame = 2 Query: 245 KKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGDMVLNLWDCGGQDSFYETYFNYQQEFIFRSVEVLIYVFDVMSDDVAGDLERYRGVLEAVDRNSSDARVFVLIHKMDLVTEEDREVVFLNRKQVISDVSGGVELTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLDNFCDICGADEVVLFERETFLVIAHATQVRHPDVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVVTTSPLVEKATTELNIKAAKKHFERLL 1129
KKKVLLMGKS SGKTSMRSIIFANY A+DT+RLG T+DVEHSHV+FLG++VLNLWDCGGQ++F ETY Q++ IFR+VEVLIYVFDV S ++ DL Y LEA+ +NS +A++F LIHKMDLV E+ R+ +F ++Q + +S +++T F TSIWDETLYKAWS+IVYSLIPN++ +E++LDNF ICGADEVVLFER TFLVI+H+T HPDVHRFEKISNI+KQFK+S SK +F+ M VKNS F+ +I FT NTYIMV+ + ++ +NI+ AKKHFE+ L
Sbjct: 2 KKKVLLMGKSGSGKTSMRSIIFANYIARDTMRLGATIDVEHSHVKFLGNLVLNLWDCGGQEAFMETYLESQRDHIFRNVEVLIYVFDVESKELTKDLAYYHDCLEAIMQNSKNAKIFCLIHKMDLVPEDQRDKIFRKKEQELRQLSSPMKVTCFRTSIWDETLYKAWSTIVYSLIPNIQSIEANLDNFTKICGADEVVLFERATFLVISHSTSHEHPDVHRFEKISNIIKQFKISCSKAQSQFQSMEVKNSQFSAYIEGFTPNTYIMVILSDTSIQSEAVHMNIRVAKKHFEKYL 296
BLAST of mRNA_E-siliculosus-1a_F_contig1063.445.1 vs. uniprot
Match: A0A7S1B8J4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8J4_9STRA) HSP 1 Score: 377 bits (968), Expect = 2.890e-119 Identity = 189/303 (62.38%), Postives = 238/303 (78.55%), Query Frame = 2 Query: 239 MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGDMVLNLWDCGGQDSFYETYFNYQQEFIFRSVEVLIYVFDVMSDDVAGDLERYRGVLEAVDRNSSDARVFVLIHKMDLVTEEDREVVFLNRKQVISDVSGGV-ELTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLDNFCDICGADEVVLFERETFLVIAHATQVRHP-----DVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVVTTSPLVEKATTELNIKAAKKHFERLL 1129
M KKKVLLMGK+ SGKTSMRSIIFAN+ A+DT+RL PTLDVEH HVRFLGD+VLNLWDCGGQD+F+E+YF +E IFRSVE+LIYVFD+ SD+ D + + GVLEA++ NS DAR+FVL+HKMDLV E+RE++F +RK++I + S G+ L F TSIWDETLYKAWS IV +LIPN+ +L++HLD+FC I ADEVVLFE+ TFLVI+ A+ + D HRFEKISNI+KQFKLS SKT +F+GM V+NSNF +I FT NTYIMV+ + ++ ATT +NI+ A+ HFER +
Sbjct: 1 MAKKKVLLMGKAHSGKTSMRSIIFANFLARDTMRLSPTLDVEHHHVRFLGDLVLNLWDCGGQDAFFESYFERDRETIFRSVEILIYVFDIESDEPEKDFDHFAGVLEAIEENSPDARIFVLVHKMDLVAPEERELIFQDRKRLIEEHSRGIGSLQCFGTSIWDETLYKAWSQIVTNLIPNITLLKAHLDDFCRISDADEVVLFEKATFLVISQASSSQKQSSDNFDTHRFEKISNIIKQFKLSCSKTQAQFQGMEVRNSNFAAYIDAFTANTYIMVIISDSSIQTATTLINIRNARGHFERFI 303 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1063.445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1063.445.1 >prot_E-siliculosus-1a_F_contig1063.445.1 ID=prot_E-siliculosus-1a_F_contig1063.445.1|Name=mRNA_E-siliculosus-1a_F_contig1063.445.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=320bp MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGback to top mRNA from alignment at E-siliculosus-1a_F_contig1063:3105..10836+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1063.445.1 ID=mRNA_E-siliculosus-1a_F_contig1063.445.1|Name=mRNA_E-siliculosus-1a_F_contig1063.445.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7732bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1063:3105..10836+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1063:3105..10836+ >mRNA_E-siliculosus-1a_F_contig1063.445.1 ID=mRNA_E-siliculosus-1a_F_contig1063.445.1|Name=mRNA_E-siliculosus-1a_F_contig1063.445.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1920bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1063:3105..10836+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |