mRNA_E-siliculosus-1a_F_contig10618.440.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10618.440.1 vs. uniprot
Match: A0A6H5JBT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT9_9PHAE) HSP 1 Score: 129 bits (325), Expect = 1.680e-33 Identity = 63/74 (85.14%), Postives = 65/74 (87.84%), Query Frame = 1 Query: 1 ELIGVDFGGRGLGVADLSADDCAGEEVIPTAPSDADCYSAESPIDVEGSTGAELTFCHCKWKEEGDNGENVSKY 222
EL GVDFGGR LGVADLSADDCAG+ VIPTAPSDADCYS ESPIDVEGSTGAELTFCHCKW E GENV+KY
Sbjct: 141 ELSGVDFGGRSLGVADLSADDCAGDGVIPTAPSDADCYSGESPIDVEGSTGAELTFCHCKWNE----GENVAKY 210 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10618.440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10618.440.1 >prot_E-siliculosus-1a_F_contig10618.440.1 ID=prot_E-siliculosus-1a_F_contig10618.440.1|Name=mRNA_E-siliculosus-1a_F_contig10618.440.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=74bp ELIGVDFGGRGLGVADLSADDCAGEEVIPTAPSDADCYSAESPIDVEGSTback to top mRNA from alignment at E-siliculosus-1a_F_contig10618:1129..2130- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10618.440.1 ID=mRNA_E-siliculosus-1a_F_contig10618.440.1|Name=mRNA_E-siliculosus-1a_F_contig10618.440.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1002bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10618:1129..2130- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10618:1129..2130- >mRNA_E-siliculosus-1a_F_contig10618.440.1 ID=mRNA_E-siliculosus-1a_F_contig10618.440.1|Name=mRNA_E-siliculosus-1a_F_contig10618.440.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=444bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10618:1129..2130- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |