mRNA_E-siliculosus-1a_F_contig1060.432.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1060.432.1 vs. uniprot
Match: D7FXZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ3_ECTSI) HSP 1 Score: 1085 bits (2807), Expect = 0.000e+0 Identity = 640/1065 (60.09%), Postives = 707/1065 (66.38%), Query Frame = 1 Query: 1 RATPRQS-AQKKLRLSPKDASRSRLKKDLHKNVSFFVEKLQEICDVWTEKLKKNFEPFAVDDTTVEILLANKQFAAIMEDLANKSRKRKERGDEAIRDNIRALWKNLSSSATVASSEGWPFRRVLLGALCGPNTTYNEVQEFVGGSLSRGAFKEATARRHETDTTGNLHDLVSDRKLRSDRLEARCPNALAWILERIVFHTQPSPCLVKTEHDYEAGNHRRSEADNSLVCVNPARCKTESVR*LMGTKLQLYQTVMKDLAEAFASQKVEVPSISRPSFESVIPFYVVEQSLRSCICVHCYKAKFVTKGLCELWPTLHQGSTLGSECDCECELCKDGGCAEYLPYRSSKVVHSMADFSDKLMCPKEQLYRSEDGTLVDAHKAIFVSGHCLLCKQKQDRFFDCPKHKGGADRLLNPAAGPAQVGAPPPGEVRWKNFTTVDDKGQATSAPQXXXXXXXXXXXXXXXXDFDPLGGSKRRTRRAVAEKTGTVDEFMAELKDNRASFGKHRRSYKTQRGQHLRRRSSPLRKEK-CFASSTSRNDSRSESRTKFSH--SIGTRRLPRSFRARSSSRLMDVSGHTPSRSSA--TTWLKITPG--CSSSCPSY*TKTSLP----C------CGRLGRNP*HAAPSGPIIAPSSSSAGSTSAG*PTPR*WGSTRTASPPESGCTW--NITTLEHATERTYRTRREE*RRRT*GGWYST*CGELPARETCARNWRRRWTSFFGSPMPRRARRSGSNARGGKEERSSCSSQRRGSARSQTNRRRRPFY*RRTPTR*WG--------DATSSSVPQMCHLTYGKPPAHQRRKSRFPDARLSA*LRLPIRPAFS*PTRFLASE------CCRDRKPENCALIRKGIMSGPQEFSRRANRNADIVSAKERDLETLFGWMPSQLPFGSIAL*RVDPSEHRGQDIVPVVVARKAACPWTPRVAADGMFGHGDTIVWVVDLPQSNERSEHVEYLVPKSF*GVKFRAVPLACIAGLGQGILGYMDYTQGSQISGSSETFVLREGVVEKARSTVVLLSTNPLAAFESFQPVPLSDDDQTRPP*SP 3093 RATPR S A KKLRL+P+DASRSR+KK L NVS FV LQ+ C WTE+L KNFEP AV+D TV+ LLANK A MEDLA+ SRK KERG+EAIRDNIRALWK LSSS TVASSEGW FRRVLLGALCGPNTTY EV EFVGGSLS AF EA RR TDTT LHDL+SDRKLRSDRLE CP ALAWI+ERI+FHTQPSPCLVKTEHDY+ GNHRRSEADNSLVCV PARCKTESVR LMGTKLQLYQTVMKDL +AFA++KVEVPSISRPSF+ +IPFYVVEQSLRSCICVHCYKAK VTKGLC+LWPTLHQGST GS+CDCECELCKDGGCAEYLPY SSK VHSMADFSD LMCPKEQLY SEDGTL DAHKA+ VSGHCLLCKQKQ+RFFDCPK+KG ADR LNPAAGPAQVGAPPPGEVRWKNFTTVDD GQATSAP DFDPLGGSKRRTRRAVAEKTGTVDEFMAELKD+RASFGKHRRSYKTQR ++ + E C R + + H T P + R+ S S A W++ + P+ K C C + + H + G G PT G G N++ E + Y R W +L + A N+ R+ + + + R N R G E+ + G QT F + P G SS V + +S + +S + + A P L ++ CRD KPENC LIRKGIMSGPQEFSRRANRN DIVSAKE DLE L GWMPSQLPFGSIAL RVD SEH GQDIVPVVVARKAACPWTPRVA DGMF HGDTIVWVVDLPQ+ R + VEYLVP+S GVKFRAVPLACIAGLGQG+LGYM++ Q SQ S SSETFVLREGVVE ARSTVVLLS NPLAAFESFQPVPLS +D+TR P P Sbjct: 47 RATPRHSSAAKKLRLTPQDASRSRMKKVLDHNVSVFVNSLQDACAAWTERLNKNFEPVAVEDATVDALLANKDLTAFMEDLASSSRKHKERGNEAIRDNIRALWKRLSSSETVASSEGWQFRRVLLGALCGPNTTYKEVHEFVGGSLSHRAFNEAQIRRDATDTTSILHDLISDRKLRSDRLEVSCPKALAWIVERIIFHTQPSPCLVKTEHDYDTGNHRRSEADNSLVCVYPARCKTESVRYLMGTKLQLYQTVMKDLDQAFAAEKVEVPSISRPSFDKIIPFYVVEQSLRSCICVHCYKAKLVTKGLCDLWPTLHQGSTPGSKCDCECELCKDGGCAEYLPYGSSKAVHSMADFSDMLMCPKEQLYCSEDGTLEDAHKAVCVSGHCLLCKQKQERFFDCPKNKGNADRQLNPAAGPAQVGAPPPGEVRWKNFTTVDDNGQATSAPLQRRRAPNSTAGGEDDEDFDPLGGSKRRTRRAVAEKTGTVDEFMAELKDHRASFGKHRRSYKTQRAAFTEKKLTIEEGEVLCIVDFQERLQVGEQDEVQSQHWDREATTIFPCPIFFKVDGRVWAYSFQILSDDMAQDNAWVQFVMSKLLNEDIPALLRKIGAKPMTRCTIWTDNCAKQFKCRFHFG-----WVADAQIMGLDKDGEPT----GIRVHMEHHYFGACHGKNVSDAEGGMTKEYVRRMILNMM-----WRVASSRDLCEKLEKALNFFLRFANGEETEAFWKDR----NGREGGTEQLLVTKTWIGEDSDQTQET--TFLLTKNPNTMMGRRYIFIGASDVSSDVRKAA-------------RSSAKEIEVSGCQTISMTAATDTPGVLLTNQFSCYCAVCRDSKPENCPLIRKGIMSGPQEFSRRANRNTDIVSAKEDDLEELSGWMPSQLPFGSIALLRVDTSEHDGQDIVPVVVARKAACPWTPRVAVDGMFDHGDTIVWVVDLPQAIVRGKEVEYLVPRSISGVKFRAVPLACIAGLGQGVLGYMEHPQCSQSSLSSETFVLREGVVENARSTVVLLSRNPLAAFESFQPVPLSVEDETRAPVEP 1078
BLAST of mRNA_E-siliculosus-1a_F_contig1060.432.1 vs. uniprot
Match: D7G3S2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S2_ECTSI) HSP 1 Score: 367 bits (941), Expect = 5.520e-109 Identity = 189/421 (44.89%), Postives = 253/421 (60.10%), Query Frame = 1 Query: 295 IRALWKNLSSSATVASSEGWPFRRVLLGALCGPNTTYNEVQEFVGGSLSRGAFKEATARRHETDTTGNLHDLVSDRKLRSDRLEARCPNALAWILERIVFHTQPSPCLVKTEHDY-EAGNHRRSEADNSLVCVNPARCKTESVR*LMGTKLQLYQTVMKDLAEAFASQKVEVPSISRPSFESVIPFYVVEQSLRSCICVHCYKAKFVTKGLCELWPTLHQGSTLGSECDCECELCKDGGCAEYLPYRSSKVVHSMADFSDKLMCPKEQLYRSEDGTLVDAHKAIFVSGHCLLCKQKQDRFFDCPKHKGGADRLLNPAAGPAQVGAPP------PGEVRWKNFTTVDDKGQATSAPQXXXXXXXXXXXXXXXXDFDP-LGGSKRRTRRAVAEKTGTVDEFMAELKDNRASFGKHRRSYKTQR 1533 IR W ++ VA+ G+ RR +LGA+ G Y EF+GG+LSR +F EA RR G++ L RK+RSD L+ + P A + + I+ TQPSP L KT HDY + G+H RS+ADNSLVCV+P +C+T V + GT+ LY M DL AF++ + E+ SISR SF+ ++PFYVVEQS+RSC+CVHCYKAK +T L +LWPTLH G GS C C C C DG C +LP+ + K VH M D SD L+C K +YR ++G V AH+++ VSGHC C++KQ FF CP+H+G DR +A A +GA P PG V+W FT+VD +G+AT A + D++P + R ++AVA KTGTVD+F E KD + HRR Y QR Sbjct: 4 IRETWAKINQPHVVAAEAGYNARRTILGAIAGEKVKYKHANEFLGGTLSRKSFNEAKERRLTALEDGDVSALAGKRKMRSDNLQEKYPMACCRVEQSILERTQPSPNLTKTNHDYRQRGDHIRSDADNSLVCVHPEKCETHRVHYMTGTQQHLYHQCMDDLQVAFSAGRAEIASISRSSFDKMVPFYVVEQSIRSCLCVHCYKAKLITVALYQLWPTLHHGDNSGSGCTCNCGFCSDGACRTFLPFATEKSVHGMGDLSDLLLCEKVFIYRGQNGKDVKAHRSVCVSGHCPTCQRKQAAFFGCPRHQGTTDRRFPSSA--ATLGACPSAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDG----DWEPRVASDTSRPKKAVATKTGTVDDFTKEFKDIFRRYIPHRRQYHNQR 418
BLAST of mRNA_E-siliculosus-1a_F_contig1060.432.1 vs. uniprot
Match: D7FWS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS2_ECTSI) HSP 1 Score: 356 bits (913), Expect = 3.250e-104 Identity = 195/432 (45.14%), Postives = 256/432 (59.26%), Query Frame = 1 Query: 256 KRKERGDEAIRDNIRALWKNLSSSATVASSEGWPFRRVLLGALCGPNTTYNEVQEFVGGSLSRGAFKEATARRHETDTTGNLHDLVSDRKLRSDRLEARCPNALAWILERIVFHTQPSPCLVKTEHDYEAGNHRRSEADNSLVCVNPARCKTESVR*LMGTKLQLYQTVMKDLAEAFASQKVEVPSISRPSFESVIPFYVVEQSLRSCICVHCYKAKFVTKGLCELWPTLHQGSTLGSECDCECELCKD-GGCAEYLPYRSSKVVHSMADFSDKLMCPKEQLYRSE-DGTLVDAHKAIFVSGHCLLCKQKQDRFFDCPKHKGGADRLLNPAAGPAQV----GAPPPGEVRWKNFTTVDDKGQATSAPQXXXXXXXXXXXXXXXXDFDPLGGSKRRTRRAVAEKTGTVDEFMAELKDNRASFGKHRRSYKTQR 1533 K K+ A+ +R +W +S S+ VAS+ G+ RR ++G + P ++ + F+GG+L +K+A RR E + + RK RSD LE P A+A + E I TQPSPC KT+HD GNH RS+ADNSLVCV P C+T + +MGT+LQLY + M+DL AF VEV SIS+ SFE +IPFYVVEQS RSC+CVHCYKAK T L ++WPTLH G T G+ C C C+LC GGC E+LPY S K V SM SDKLMC K LY + +G + AH ++ VSG+C CK++QDRFF CP+++GG DR L PA+ + G G V W F TVD+ G+A + XXXXXXX K+ V K GTVDEF E+++ + + KHRR + QR Sbjct: 121 KAKKNEHHAVVQAVRDVWSIVSGSSVVASAGGYSLRRTMVGIIGSPRVSFEAAKSFLGGTLKEKTYKKARERREEALKNNDFGKMAGKRKQRSDNLEDLYPFAMARVRESIEERTQPSPCETKTKHDRAKGNHIRSDADNSLVCVRPELCQTHGISYMMGTQLQLYNSCMEDLQAAFEQGHVEVGSISKKSFEDIIPFYVVEQSPRSCLCVHCYKAKLATVSLVKMWPTLHHGETTGAACSCTCDLCSSAGGCKEFLPYSSPKEVSSMGKLSDKLMCDKIFLYTATGNGKAISAHSSVCVSGNCPRCKERQDRFFGCPRNRGGIDRDLGPASTSSSTIHPAGRTSGGTVEWSMFDTVDEAGRAVGPSRRRGANAGGDXXXXXXXXXXXXXXPKK----GVVVKRGTVDEFFEEVREIQGVYRKHRRQFHHQR 548
BLAST of mRNA_E-siliculosus-1a_F_contig1060.432.1 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE) HSP 1 Score: 268 bits (685), Expect = 4.750e-70 Identity = 142/297 (47.81%), Postives = 179/297 (60.27%), Query Frame = 3 Query: 1587 IVDFQERLQVGEQDEVQSQHWDQEATTIFPCPIFFKVDGRVWAYSFQILSDDMAQDNAWVQFVMSKLLNEDIPALLRKVGAKPMTRCTIWTDNCAKQFKCRFHFGWVADAQIMGLDKDGEPTGIRVHMEHHYFGACHGKNVSDAEGGMTKENVRRMVLNMMWRVASSRDLCKKLEKALDFFLRFANAEESEAFWKQRKGREGGTEQLLVTKTWI-------GEESDEPQETTFLLTKNPNTMMGRRYIFIGASDVSSDVRKAARSSAKEIEVSGCQTISMTAATDTPGVLMTNQISC 2456 + DFQE+L++ EQDEVQSQHW E TIFPCPI K GR DNAWVQ VM K++ E +PAL+RK+GA M R +TDNCAKQFKCRFHFGW+A ++M D +G T + VH+EHHYFG+CHG + SD+EG TK R+ ++N W V R L L +++DF L EE F R GG +QLLVTKT I G E F + PNT++GR+YIF A D+ VR A+RS +K I+V GCQ IS AT+TPGV+ T +SC Sbjct: 455 VFDFQEQLKLMEQDEVQSQHWQHERVTIFPCPIHCKWKGR---------------DNAWVQHVMFKIMTEHVPALMRKLGAPAMVRAIFFTDNCAKQFKCRFHFGWLASHEVMIRDNNGGSTNVPVHVEHHYFGSCHGNSGSDSEGANTKSTTRQNIINQTWVVQGPRHLSTLLGESMDFILEEPTEEEEMIFEASRTSSRGG-DQLLVTKTCIIGTEEGVGGRKQMQGEEDFSGHEEPNTLLGRKYIFQAAGDIPPAVRSASRSESKAIKVEGCQVISKIVATETPGVVATYTLSC 735
BLAST of mRNA_E-siliculosus-1a_F_contig1060.432.1 vs. uniprot
Match: A0A6H5JXK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK3_9PHAE) HSP 1 Score: 225 bits (573), Expect = 1.340e-61 Identity = 130/307 (42.35%), Postives = 164/307 (53.42%), Query Frame = 3 Query: 1596 FQERLQVGEQDEVQSQHWDQEATTIFPCPIFFKVDGRVWAYSFQILSDDMAQDNAWVQFVMSKLLNEDIPALLRKVGAK---PMTRCTIWTDNCAKQFKCRFHFGWVADAQIMGLDKDGEPTGIRVHMEHHYFGACHGK-----------------------------NVSDAEGGMTKENVRRMVLNMMWRVASSRDLCKKLEKALDFFLRFANAEESEAFWKQRKGREGGTEQLLVTKTWIGEESDEPQETTFLLTKNPNTMMGRRYIFIGASDVSSDVRKAARSSAKEIEVSGCQTISMTAATD 2420 QE+LQ+ EQDEVQ QHW E TIFPCPI+FK GRVWAYSFQ+LSD ++VGA M R +TDNCAKQFKCRFHFGW+A +++ D +G T + VH+EHH+FG+CHGK + SD +G TK + ++N W V R LC L +A+DF L EE F GG +QLL+TK W GE S + TFL+TK PNT++GR+YIF A D+ VR A+RS +K I+V GCQ IS D Sbjct: 33 LQEKLQLMEQDEVQLQHWQHENVTIFPCPIYFKWKGRVWAYSFQVLSDYRKSG--------------------QRVGAACAPTMMRAIFFTDNCAKQFKCRFHFGWLASHEVIIRDNNGGSTNVPVHVEHHHFGSCHGKRDDXFAITTAGLPTYQCMWSITTLGAATGSGSDIKGANTKGTTTQNIINQTWVVQGPRHLCTLLGEAMDFILEEPTEEEEMIFEASSTSSRGG-DQLLMTKLWGGE-SRCKERKTFLVTKKPNTLLGRKYIFQAAGDILPAVRSASRSESKAIKVEGCQAISKILCKD 317
BLAST of mRNA_E-siliculosus-1a_F_contig1060.432.1 vs. uniprot
Match: A0A6H5KFD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD4_9PHAE) HSP 1 Score: 225 bits (574), Expect = 2.900e-59 Identity = 122/253 (48.22%), Postives = 153/253 (60.47%), Query Frame = 3 Query: 1683 IFFKVDGRVWAYSFQILSDDMAQDNAWVQFVMSKLLNEDIPALLRKVGAKPMTRCTIWTDNCAKQFKCRFHFGWVADAQIMGLDKDGEPTGIRVHMEHHYFGACHGKNVSDAEGGMTKENVRRMVLNMMWRVASSRDLCKKLEKALDFFLRFANAEESEAFWKQRKGREGGTEQLLVTKTWIGEESDEPQETTFLLTKNPNTMMGRRYIFIGASDVSSDVRKAARSSAKEIEVSGCQTISMTAATDTPGVLMT 2441 I+FK GRVWA SFQ+LSDD QDNAW Q VM KL+ E +P L+RK+GA M R +TDNCAK+FKCR HFGW+A +++ D +GE T + VH EHHYFG+CHGK+V S R LC L +++DF L EE F R GG +QLLVT W G ES + TFL+TK PNT++GR++IF A D+ VR A+RS K I+V GCQ S AT+TPGV+ T Sbjct: 120 IYFKWKGRVWANSFQVLSDDRTQDNAWAQDVMFKLMTEHVPVLMRKLGAPAMVRAIFFTDNCAKRFKCRLHFGWLASHEVIIRDINGESTNVPVHAEHHYFGSCHGKSVQ-----------------------SPRHLCTLLGESVDFILEEPTKEEM-TFEASRTSSSGG-DQLLVTTVW-GSESRCKEGKTFLVTKKPNTLLGRKHIFQAAGDILHAVRSASRSELKAIKVEGCQANSKIVATETPGVVAT 346
BLAST of mRNA_E-siliculosus-1a_F_contig1060.432.1 vs. uniprot
Match: A0A6H5L1G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G9_9PHAE) HSP 1 Score: 209 bits (531), Expect = 3.500e-54 Identity = 128/327 (39.14%), Postives = 161/327 (49.24%), Query Frame = 3 Query: 1557 LTIEEGEVLCIVDFQERLQVGEQDEVQSQHWDQEATTIFPCPIFFKVDGRVWAYSFQILSDDMAQDNAWVQFVMSKLLNEDIPALLRKVGAKPMTRCTIWTDNCAKQFKCRFHFGWVADAQIMGLDKDGEPTGIRVHMEHHYFGACHGKNVSDAEGGMTKENVRRMVLNMMWRVASSRDLCKKLEKALDFFLRFANAEESEAFWKQRKGREGGTEQLLVTKTWIGEESDEPQETTFLLTKNPNTMMGRRYIFIGASDVSSDVRKAARSSAKEIEVSGCQTISMTAATDTPGVLMTNQISC**VLP*PQARKLRSHSKGHHVGPTRVF 2537 LT+EEG V+ + DFQE+ Q+ EQDEVQSQHW ++ TIF CPI+ K R+WAYS+Q+LSDD QDNAW A P +TDNCAKQFKCRFHFGW+A ++M D GE T + VH+EHHYFG+CHGK+V R LC L +++DF L EE F R G +QLL+TK + R++I A D+ VR A+RS +K I V GCQ I AT+TPGV+ T +SC L H V P VF Sbjct: 16 LTLEEGTVVYVFDFQEQRQLMEQDEVQSQHWQHDSVTIFRCPIYLKWKARMWAYSYQVLSDDRTQDNAW---------------------ALPPWCELFFTDNCAKQFKCRFHFGWLASYEVMIRDNHGESTNVPVHVEHHYFGSCHGKSVQ-----------------------GPRHLCTLLGESMDFILEEPTEEEEIIFEASRTSSRRG-DQLLMTK------------------------IIRKFILQAAGDILPAVRSASRSESKAIRVEGCQPICKIVATETPGVVATYTLSC-----------LNFHDGPWSVAPIGVF 262
BLAST of mRNA_E-siliculosus-1a_F_contig1060.432.1 vs. uniprot
Match: A0A6H5JLV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLV8_9PHAE) HSP 1 Score: 126 bits (316), Expect = 4.980e-29 Identity = 72/173 (41.62%), Postives = 99/173 (57.23%), Query Frame = 1 Query: 268 RGDEAIRDNIRALWKNLSSSATVASSEGWPFRRVLLGALCGPNTTYNEVQEFVGGSLSRGAFKEATARRHETDTTGNLHDLVSDRKLRSDRLEARCPNALAWILERIVFHTQPSPCLVKTEHDY-EAGNHRRSEADNSLVCVNPARCKTESVR*LMGTKLQLYQTVMKDLAEA 783 R D+ + + I +W N++ VA+ G+ RR +LGA+ + Y+ EFVGGSLSR AF EA A R G++ L K RSD L+ + P A + HTQP P L KT HDY + G+H RS+ADNSLVCV+P +C+T V + GT+ L++ M DL A Sbjct: 44 RNDKPV-EAITEIWANVNQPHVVATLPGYKARRAILGAIASNHVKYSTACEFVGGSLSRAAFNEAKAPRETALADGDMSKLSGTSKERSDNLQKKSPMACGRE-QSFAEHTQPFPNLTKTNHDYRQRGDHIRSDADNSLVCVHPEKCETHPVYYITGTRDHLFRQCMDDLQAA 214
BLAST of mRNA_E-siliculosus-1a_F_contig1060.432.1 vs. uniprot
Match: A0A6H5JZH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH6_9PHAE) HSP 1 Score: 106 bits (264), Expect = 2.460e-21 Identity = 86/259 (33.20%), Postives = 121/259 (46.72%), Query Frame = 1 Query: 2485 ENCALIRKGIMSGPQEFSRRANRNADIVSAKERDLETLFGWMPSQLPFGSIAL*RVDPSEHRGQDIVPVVVARKAACPWTPRVAADGMFGHGDTIVWVVDLPQSNERSEHVEYLVPKSF*GVKFRAVPLACIAGLGQGILGYMDYTQGSQISGSSETFVLREGVVEKARSTVVLLSTNPLAAFESFQPVPLSDDDQTRPP*SPECLQMIQ*LSSCSRARVQVAADLCGKMGRSF-ARSLLIARQI*SHVVISTSCSGRE 3258 E C L R+GIM P E+SRR + N D + +ER +E +F + LP+GS+AL PS+ T A DGMF GD +VW+ D + VEY VP + RAVPL +AGLGQGI GYM+ + + + + +R VV+ ARS +V +S P AF +P + D+ R P + S RVQ + G F + S R+ ++ I+ SCSG E Sbjct: 61 EKCNLFREGIMEAPAEWSRRRS-NDDEETTRERKMELMFTRTRNPLPYGSVAL-MCAPSDR------------------TSSFAKDGMFSEGDGMVWIHDFFR---HVRGVEYDVPNVLPVDENRAVPLTSLAGLGQGIEGYMEEVSRASRTSLTTRYRMRRDVVDSARSNLVFMSKRPQDAFVDCRPAKMRKIDRRRAHVQPSLFEACN-----SGERVQSSTTGEGYSVERFESDSGKGCRRPPTNDAIALSCSGLE 291
BLAST of mRNA_E-siliculosus-1a_F_contig1060.432.1 vs. uniprot
Match: A0A6H5JLY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY1_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 3.070e-8 Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 1 Query: 838 VIPFYVVEQSLRSCICVHCYKAKFVTKGLCELWPTLHQ 951 ++PFYVVE SLRSC+CVHCY+AK +T C+LW TL Q Sbjct: 1 MVPFYVVEHSLRSCLCVHCYRAKLITVAPCQLWSTLSQ 38 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1060.432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 10 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1060.432.1 >prot_E-siliculosus-1a_F_contig1060.432.1 ID=prot_E-siliculosus-1a_F_contig1060.432.1|Name=mRNA_E-siliculosus-1a_F_contig1060.432.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=354bp MGTKLQLYQTVMKDLAEAFASQKVEVPSISRPSFESVIPFYVVEQSLRSCback to top mRNA from alignment at E-siliculosus-1a_F_contig1060:31070..36861+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1060.432.1 ID=mRNA_E-siliculosus-1a_F_contig1060.432.1|Name=mRNA_E-siliculosus-1a_F_contig1060.432.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5792bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1060:31070..36861+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1060:31070..36861+ >mRNA_E-siliculosus-1a_F_contig1060.432.1 ID=mRNA_E-siliculosus-1a_F_contig1060.432.1|Name=mRNA_E-siliculosus-1a_F_contig1060.432.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2124bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1060:31070..36861+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |