Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 1014 |
| Model size | 1807 |
| Exons | 3 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1059.421.1 >prot_E-siliculosus-1a_F_contig1059.421.1 ID=prot_E-siliculosus-1a_F_contig1059.421.1|Name=mRNA_E-siliculosus-1a_F_contig1059.421.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=338bp
MTEIDTSISTFSSDYDAAQDDAVELMELALESQGDGNENGDALVEDDAGN
PAGEYHAPAEPLLGHTRCKLSYDGSVLPDTHGADFCPSGVDANTWKGTLS
FVHKEVRAFNLSRGRRHLLLFCLKSWATVVVWYLVNIQFFGLIYEILESA
VTFNVVLDSGIYFTVFYLTEWAVFSMPGAVIGYLGRSFEAQLYTKLKERV
FGASQDIDGSSVRLVLRFAKGSHHPPNRNFMAYVLANLFCPEVTRMGAGH
RYDLHMLPWDIKELKAITVRCPRCEEVCDADPRQVHFRCMRCLACSSLAL
PALAPDEYGSPETRRVPRWTSAPSRLRFRPAPSSTVV* back to topmRNA from alignment at E-siliculosus-1a_F_contig1059:20564..28055- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1059.421.1 ID=mRNA_E-siliculosus-1a_F_contig1059.421.1|Name=mRNA_E-siliculosus-1a_F_contig1059.421.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7492bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1059:20564..28055- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCAGCACCTCTTCGTCCCTTCCTCTCTTCGTCCTATCTTCGTCCTACCTT
CGTCTCTCTTTGCTCTCTTTAGCTTTTGGCTGGGAGGGACGCATTGTTCG
ACTGGAAGGGTAAAGCGGGGCACTACTGCGAGGTTGGCGGGCCCATCAGA
GACACAGTGTTTTTCCTAGAAGAAGGTAAATGGCGCGGATTTCCGGATAG
AGTTCATACTGTTGCCACTGCTCACAGCGGGCTGGAAAAAGCAGCCCGTT
CACACCCCACTCGGAAAATCTCAGGTAGCGCGCCTCAAAGGACCGCGAAA
GGTGGTTGCGTATTTCACGTACAGCAATACATCAATAACCTACCAGCATC
CTGATTTTCGATCCTGAATGTTTTCGATCGGTGTGCGGTGCAACATGCTG
CTATAGTCTATATATAACAGCGCAGGCACGGCAGGTATTTTTCCGGTCGT
ATAAGTGCGCCGGTTGCATGTTGCATGTCGATGTCTACACATGCCGGTTG
CCCAGTGCATAAATGCGTTGCTTATGTTCGCTCACTATTCACGGATGGAT
GTGTAGCTTCTTTCGAGAAAGCTATGCTTCCTCGCCCTCGTACACGTATG
CCGGTGGGAATCTCTCGACCGTCGTGTACGCGGATTCACATACATCAGCA
TACATCGGGACAAATGTGTCCGGAGTTCAGGCGGAGGAAATAATAAAACA
CTGCATACCCGGGAACCCGTACCAGGAACACCAAGGATGTGCTGCCCTCT
CCAGACAACTCTTTTTTGTGGCGCGATATTCTCGTCTCCTGCATCTTGAC
GCGTCCCGAGTAGATAAAACAGCAAGGGGTTTTACGTGTTCACCGCTGTG
TGTGCTTGAAATAAAGTATTATATCACATAATTTGCGGTGCTTACGCTTA
GGTGGAAGCGCCAGATTTCCGTATCCGCATGGGCTGCTGGTAGGCCAGTT
TCCCTCTTCACTTTCTGGCTGCATTCTCCGCAAACAGTTCGGAATCTCTC
CCCACGTGTGTCGCTACTTTACGGTACTCGAGTGCCAAGTCTCTCTCTAC
AACCTTTTTTCCTCTACCTCCCTCTCCCGGTGCCGGGCATACACCCGCTC
GGTAGCCGCGCGCACACTATTGATGGAAAGCTGGTAGTATTTATGTATGT
GGTTGGTGCATCATGTTTTTTTTATATTTTCTAGGCCTGTCGTCGACAGA
CAGGCTACATCGCGATTTAGATACGCGATATTCCTAACTCTATTTTCAGT
ATAGTATTGCCCGCAGAGGAGTTCTGCGGGCCGGTCCCAGTTTCTCTCGA
TTGATGTGGTATTATCTATGATTTACCTCACTATCTTTCTCATCATCAAT
CAGTGATATCACGCGGGGTCTTTATAGCATCGTACACACCCCATCCAGAA
GTCCATTTTCACTTCGAAAAGAGGCGGTGATGACAATAATATTATTATGA
TGGACTTGTGATGGATCATTTGTTGTCAAAATCTCTAAGAAAGATTGAAC
GGCAGCCACCTCTGGCGCTTGCAGCGCCTCCGGCGGCCGCGCCTGGTACT
ACTGCTGTAGGGATGACACCTGACCTGCACATTCCTGCTTGCGCGGGGGG
AGGAAATTAATAAGAATCATCAAACTAATATAAATACTTGTGATAGGTTT
TGGTTCATCGGCAGGGAGGGCTGTAAATGACGCACCAATCAGTTCTTGAC
AGTCGGCGGCCACCTCTGGCGGCCGCGCCTGGAACGTGCGGGAGAAGAAA
GGAAGAGGTCCAGGAACTGCCATCTTCAGCCAGCTACTGGTAGTAGCACT
GATGATCATGCTACTGGGAATGTATGTTGTAATAATTTCCAGTGATGGCA
GTTTCCGGGTACCAGAAATTTCCGGTAACAAGGTTCAGGGGTCGATACCC
TGGAAATTCCCGGAAATTTCTAGGTTTCTGGGGGGGGTGGTTCTGGGGGG
AGGTCTTGTTTCACATCTGCTGTACCCCCTCTCCACCCACAGCAGCACAC
AGCAGACAGACCCAGACCACACTCTACCCACACAGCAGCAATATACGCGC
ATGTTGGTTCTCTATCTGTCTTCTTCTCGTTGACAAATTTTTTAAATCCT
TCTTTTTCCGGACCGCCTTCTTCGCGGGAAATTCAGCATAATAAGGAAAT
AGAACAGGGAGGAGGTGGTACGCAGACCCTATTCCCTAACCCTAACCCTA
GCTAACCCAATTCCCCGATTGTTACAGCATACAACAACGAACGGCTTGCA
ACGTGGTGAGCAAAATATCAAAAATATGCGTTGTATACCACCCCGGGGAT
AGGACATTTTCGTCCCCGACCAGAGCGGAAATTTCCGGTCGGTACCTCCA
AAAGCTCATTTGCGGTCATTTCCGGTCGGTACCCTAAATAATCCCGGAAA
CTGCCATCACTGATAATTTCGAATGGCGGCCACCCAGGACGCCTCCGGCG
CCTCCGGTGGCCGCGCCTTGAACGGGGAGAAAAATGCCGAGAAAAGATCA
ACAGCAGCAGCAGAAATGATTCTATTTATTTATTTCCACCCACTTTGTTC
CACCGACGACGAAGAAATGTTGTTGTTATTGCGTTTCGTTCGAACATGCG
GAGGGTCTCGTCTCGTCCTCTGTGATAAGTGATGCATGTGATGGTCACGG
AATGCAGACCTCCTCATACGCTAGGCGGCAGAAAACAGCCTTATTCTTCG
CGTGATTGAGCATCGTACAGCGCACTTCGTTTACAGGTGCTCCGTATGTT
CCAACAGCGATCTACCGTCGTATTGTAGCTAACAGTGCTGGCGTCGATGA
GTATGAAGGTCGTTTGTGTCCTATCAAAGTGGCATGTTCGTCGCTTTCGA
CTTGATTTTGGAACGAAACGACGGGAGTTGAGCCCAAACGAGGAGGCGTT
ACAAGGGCGGAGCCCAAATACGGACCTTGCACGTGGTTCGCCCACAGGAC
CCAGTTTTGATTAAAACTGGGAAAACTGGGAATGTTAACAAAAATCGACA
GCGAAAATATCAGGCAATCGCCTTTCGAGGACAGGCATAATATTTTCTAG
ATATTACACGGCGAACGGAGATGTCATTGTGAATCAATCACCATCACTTT
TCCTACCTTTTTCTCATCACGACGACCATCATGCAGGAGGAGCTGACTTG
TAAACATAACAATATCGACATCTTCCCATGATGAGCATTTCGCCTTCACG
AGGTTATTGTACAATGCCATACCGTCTCATATGAAACGCGCATGAGGCCA
GAAAACTTCCCAAAGAGGGATCCAACGATAATCAATCACGTACATAGCCT
TTCGTTACTTCCAGGTCGCAGGTTAGGTAAAACGCGACTTGATCATCACA
CACGGCCCACAACCACAAAATATCCAACCCAATCCAAGATGATGACACGA
GTGCGCGGCGGGTAGCGGAATCAATCGATATTACCACCCCGATTCTTCGC
ACCACTCTATACACCAAGACCCATCACCGAGCAAACTACTATCTATCCTC
TCTGAGTGCAGCACCTCCCTCGACGTTGAACAGTGTCTGCCTTTTGGCGA
AACATTTGAAATCGAGAGCAAGCTCATCCTTGTTCACTGTATAGCTTCTT
CTTCTTTCCAACTGTTCCAGACATGTTCTGTGGACCCTTATCCCAATTTT
GGAGGACACTACCACGATCCCTGTCTCCCCCCCGCTTTTGTTCAGCATCA
AGCTGGTGCGTTGGCGCGGACGGTAGAACCCTTTAGACGCGGCGTTGCGG
CTGAGGATTGCCGCGTTGTCACGCAAGCAACTCGATCAGAGTGCGCCCGT
CGAGGTGAACACCAGTGTCTTGCGGTGCTCTAGACAATGGCTTTGTACGC
GGTCGTCGACCCTTTTTAAGTTTGTTTCAGTACCACCCTTCTCTCGTCGA
TTTGTTCTCGCCAGGGTTGAGTTGCTCCTCAAACATTAGTTTGGCGAGGT
GCGTACGGTCTGTCTCAGAGAAGTACCTGAATCCGGCGGGCATTCGTCAA
ACGGGTCGACCGCATCCTCGCGCCACCTCAGAAGAAGTTCTTGAGCTGCG
CGCCCTTCCTCGGTACCACGGAGGGTAGTGTGGCGGGCCTCGATCCCGGG
CACTGCAGTTGTAAGGGAGTAGAAAGGGGAAGCCAAGCATAAGTGGGGCC
TCTTCGGCATCTTTAGCCTAAAAACAATTTTTCGACGAGAGTTCAAGGGG
AAAAGTTCAAAGGGGGGTCCACGCGGTAAACTGGTCATTAAGTTGTTCAA
GCACCCTCGAAGCAGTTACACAGAATCAAGGAAGTGAAAGCATCACAAAT
AAAATAATTCATTCGCCGCTGTTATCCGTGTCCAAGGAAGTAAGCACAAA
ACGCCGAACACCCTTCGCAGGATGCAGAGCACCCTTCATGCGACTCGCCG
AATACCTCACGGCCCTTCGCGCTTGGTGATGTGCGAGTCTAGTCCGGTGA
GAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCAAGGTCAATGGTC
TAACGACTACGGCATGCACGATTATTAGTACACCCCCCCTCCCTGACCTT
TTTTTTTTGGCGGTAACCATGATGGTGGTCGAGTAGATCATGTTGTGAGG
GGTGGAGAACCCTCACTCCGCGCAAGGGGGATGATCGCACCACGTTGTGT
TAAAATGGTCAAGCGTCCTCGAGGTAGTTACACAGTGCTTCTAACTGTCT
CCGGAAGTGAAAGCACCAGAAAAAAAATTAAGTCATCCGCAGCTGTCATC
CGTACGCAAGGAAGTAAGCACAAGATGCCGAACACCCTTAGCAGGATGCA
GCGCACCCTCCATGCGACTCGCCGAATACCTCACGGCGCTTCGCGCTTGG
TGATGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTGCTCCGTCCCAGCTT
TGTAGGGATGCGAGGTCAATGGTCTAACGACTACGGCATGCACGACTATG
AGTACACCCCCCCCCCCCCCCCCTGACCTACACTTGTGTTGAAGCACACG
TGCCGTTTGCAAAATATTGCGGACGGTGGCGGCTTCTGTCGCAACAAAAT
AATGTCGCCGTGCGCTAGTCCAGAGAATCAACCGCTACGGTTGGTGATGG
GTGGTGGCCTGATGGAGCCGAAAAGGCGGGTCCCTGGTACAAGATACTCC
GTAGTTATGTTGAGTTTTCTGGAAAATTGGAAGAGCTCCCGATATGAGTG
TCGATGTTACCTCCGGACTACTGAAAAGTGGTAGGGACACTGCTGCGTCT
CAAAGGGATACGAGCCCAATGATCAAATGATTGGGGAAAGCAACAGCATC
AAAAGCCCAACATTACCACGTCCACCCCACCCACCCCCCTGAGTCACTTA
CCCACACAAACACCTCGCTCCGAATGACATTTCTATTCACAGACTACGCG
ATTCTCCGAGAGCGAACCCCGAATACAAGCACACACGCGCCATGACTGAA
CCCTCGAGCCTAAGAACCCCACAGCAGTTCGCCGGTGCTCTTTCGGTTGG
TATGCTAAACCAAACACGCTGAATAACAAGGTCGCTGAATGCTCCCTCCG
TGCGCTCTTCGTGTGGTTGTCAGTGCTGCTCGAGAAGACGATGACGGAAA
TTGATACTTCGATTAGCACTTTTTCAAGCGATTATGACGCGGCGCAGGAC
GACGCTGTCGAATTGATGGAACTGGCTCTCGAGTCCCAGGGCGACGGCAA
CGAGAACGGAGATGCACTCGTCGAAGATGATGCCGGCAATCCCGCAGGTA
ATTCCAAACAAGCTAGTTGCATTCGAAACCGACACCTTCATGCATGGCAT
GCTGATGCATTCAGGCGCACAATGAACAAAAAAAAAAAAAAAAGCGTGGA
CGATCAACCCATCACAGCACCCACTCTTTGCAGGCGATGCAATCATGTCA
TCAACTGTGAAACCTACACAGTCTATCTACATGATACGTATTCTGGTACC
CTTTATTATTGCTCTCCGCCAAATGCTAACCGCTCTCCCCCCTCCTGTCA
TCCCGTTGATCGTGCACCGATGCCGCCGTACCAGGCGAATACCATGCCCC
TGCCGAACCTCTATTAGGTCACACTAGATGCAAGCTGAGCTACGACGGTT
CCGTCCTTCCTGACACACACGGGGCCGATTTCTGCCCATCTGGGGTTGAT
GCCAACACTTGGAAGGGGACGCTTTCCTTCGTTCATAAAGAAGTGCGGGC
ATTTAACTTGTCGCGAGGACGGAGGCACCTATTATTGTTTTGCTTGAAGA
GTTGGGCAACCGTGGTGGTGTGGTATCTCGTCAACATCCAATTCTTTGGA
CTCATCTACGAAATATTGGAATCGGCGGTGACTTTCAACGTAGTTCTGGA
TTCGGGTATATACTTCACCGTCTTCTACTTGACAGAGTGGGCTGTCTTTT
CCATGCCAGGTGCCGTTATCGGTTACCTGGGGAGATCATTCGAAGCTCAG
CTGTACACCAAACTTAAGGAGCGTGTCTTCGGCGCGTCACAAGACATTGA
CGGGTCTTCCGTACGCCTTGTTTTGAGGTTTGCGAAGGGCTCTCACCACC
CTCCCAATCGGAATTTCATGGCCTACGTCCTTGCCAACCTCTTCTGCCCG
GAAGTTACAAGAATGGGCGCGGGCCATCGATACGATCTGCACATGCTGCC
GTGGGACATCAAAGAGCTGAAAGCCATTACCGTGCGGTGTCCGAGATGTG
AGGAGGTGTGCGACGCGGACCCTCGCCAAGTTCATTTCCGCTGTATGCGA
TGCCTGGCGTGTTCGTCTTTGGCTCTGCCCGCTCTCGCGCCGGATGAATA
CGGTTCACCAGAAACTAGGCGTGTTCCTCGATGGACTAGTGCCCCGTCCC
GACTCCGATTTCGACCTGCTCCAAGTTCGACCGTCGTGTAGTCGTTTTTT
TCTTTTTGGTGTCGGTGTGCAACCTTGATGTCTGATGCTTCAACCCCTGG
ACTATTACAGTAGATTTTGTCGGTGTATCTTGGGGGCGTAGCCTCTAGCT
AGACATCTCGATAGAAAGCGAGTGTGAGTCGAATGTTGTAGGGAGTGCCG
ATGGGGGTGGGATTCGCAGTCGGAGGTAGAGTAGAAGGCATTCGCATTCG
CAGTCGGAGGTAGAGTAGAAGGGTGGAAGGAAATGAGTGTTGCAGTGGCG
GTTTGGAGAGAGAAAGGTCGGGAAGCGGTTGGATTCAGAGCGAACAAGCG
GACGGTTGCCTTGGTTGACTGTTGAAAAACCACGCCGCTGACACTTTTGC
GCCAAAGCATGCGCGGGACAGCTTAAAAACGACGGACTTTGGTTCGATGA
CGGCGGGTTTTTCCTTGGTTTGATTTGCCTCTCTTGATCAAGGATCCGCT
GGAATGGCGTGAAAAGTAAGATTGCTGTTGCGATGGTGGTTCGGTACCGT
ATGAGCCAACTTGCTCCTACGTGGGGACATGTAGCGTACGCGCAGCGCTT
CTTCATTAGACGGATTATTGAACGACTTGGCGACAAAAAACG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1059:20564..28055- >mRNA_E-siliculosus-1a_F_contig1059.421.1 ID=mRNA_E-siliculosus-1a_F_contig1059.421.1|Name=mRNA_E-siliculosus-1a_F_contig1059.421.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2028bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1059:20564..28055- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACGGAAATTGATACTTCGATTAGCACTTTTTCAAGCGATTATGACGC
GGCGCAGGACGACGCTGTCGAATTGATGGAACTGGCTCTCGAGTCCCAGG
GCGACGGCAACGAGAACGGAGATGCACTCGTCGAAGATGATGCCGGCAAT
CCCGCAGATGACGGAAATTGATACTTCGATTAGCACTTTTTCAAGCGATT
ATGACGCGGCGCAGGACGACGCTGTCGAATTGATGGAACTGGCTCTCGAG
TCCCAGGGCGACGGCAACGAGAACGGAGATGCACTCGTCGAAGATGATGC
CGGCAATCCCGCAGGCGAATACCATGCCCCTGCCGAACCTCTATTAGGTC
ACACTAGATGCAAGCTGAGCTACGACGGTTCCGTCCTTCCTGACACACAC
GGGGCCGATTTCTGCCCATCTGGGGTTGATGCCAACACTTGGAAGGGGAC
GCTTTCCTTCGTTCATAAAGAAGTGCGGGCATTTAACTTGTCGCGAGGAC
GGAGGCACCTATTATTGTTTTGCTTGAAGAGTTGGGCAACCGTGGTGGTG
TGGTATCTCGTCAACATCCAATTCTTTGGACTCATCTACGAAATATTGGA
ATCGGCGGTGACTTTCAACGTAGTTCTGGATTCGGGTATATACTTCACCG
TCTTCTACTTGACAGAGTGGGCTGTCTTTTCCATGCCAGGTGCCGTTATC
GGTTACCTGGGGAGATCATTCGAAGCTCAGCTGTACACCAAACTTAAGGA
GCGTGTCTTCGGCGCGTCACAAGACATTGACGGGTCTTCCGTACGCCTTG
TTTTGAGGTTTGCGAAGGGCTCTCACCACCCTCCCAATCGGAATTTCATG
GCCTACGTCCTTGCCAACCTCTTCTGCCCGGAAGTTACAAGAATGGGCGC
GGGCCATCGATACGATCTGCACATGCTGCCGTGGGACATCAAAGAGCTGA
AAGCCATTACCGTGCGGTGTCCGAGATGTGAGGAGGTGTGCGACGCGGAC
CCTCGCCAAGTTCATTTCCGCTGTATGCGATGCCTGGCGTGTTCGTCTTT
GGCTCTGCCCGCTCTCGCGCCGGATGAATACGGTTCACCAGAAACTAGGC
GTGTTCCTCGATGGACTAGTGCCCCGTCCCGACTCCGATTTCGACCTGCT
CCAAGTTCGACCGTCGTGTAGGCGAATACCATGCCCCTGCCGAACCTCTA
TTAGGTCACACTAGATGCAAGCTGAGCTACGACGGTTCCGTCCTTCCTGA
CACACACGGGGCCGATTTCTGCCCATCTGGGGTTGATGCCAACACTTGGA
AGGGGACGCTTTCCTTCGTTCATAAAGAAGTGCGGGCATTTAACTTGTCG
CGAGGACGGAGGCACCTATTATTGTTTTGCTTGAAGAGTTGGGCAACCGT
GGTGGTGTGGTATCTCGTCAACATCCAATTCTTTGGACTCATCTACGAAA
TATTGGAATCGGCGGTGACTTTCAACGTAGTTCTGGATTCGGGTATATAC
TTCACCGTCTTCTACTTGACAGAGTGGGCTGTCTTTTCCATGCCAGGTGC
CGTTATCGGTTACCTGGGGAGATCATTCGAAGCTCAGCTGTACACCAAAC
TTAAGGAGCGTGTCTTCGGCGCGTCACAAGACATTGACGGGTCTTCCGTA
CGCCTTGTTTTGAGGTTTGCGAAGGGCTCTCACCACCCTCCCAATCGGAA
TTTCATGGCCTACGTCCTTGCCAACCTCTTCTGCCCGGAAGTTACAAGAA
TGGGCGCGGGCCATCGATACGATCTGCACATGCTGCCGTGGGACATCAAA
GAGCTGAAAGCCATTACCGTGCGGTGTCCGAGATGTGAGGAGGTGTGCGA
CGCGGACCCTCGCCAAGTTCATTTCCGCTGTATGCGATGCCTGGCGTGTT
CGTCTTTGGCTCTGCCCGCTCTCGCGCCGGATGAATACGGTTCACCAGAA
ACTAGGCGTGTTCCTCGATGGACTAGTGCCCCGTCCCGACTCCGATTTCG
ACCTGCTCCAAGTTCGACCGTCGTGTAG back to top
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