mRNA_E-siliculosus-1a_F_contig1057.411.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1057.411.1 vs. uniprot
Match: D8LN51_ECTSI (Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN51_ECTSI) HSP 1 Score: 1723 bits (4463), Expect = 0.000e+0 Identity = 1063/1491 (71.29%), Postives = 1080/1491 (72.43%), Query Frame = 1 Query: 52 MSSMTISPRLQAKEIARREQAEHQKNRSQSGRRXXXTAQSAPPAEEEAAAKRPRTSTPKARPPAPSKAGSIRHARPAKQLGGETPPEGNK-VGSKKGTANRAPGSAKTNSXXXXXXXXXXXXXXXXXXX---EQREKKGWSRGKLAPCGKRAQVSERAASTGARKVAAKKASMSSPPAGQGNXXXXXXXXXXXXRGAAPHKGKLPPQSNLGRAFGKGPSAKQRKLFKLSKSLLPLGIWPSSGESEAFDIAPEWKASLLKRYENPPPYRKLKANLYEDSSLKGLVPVDEIPLCNCRPEDGCDASCINRLLLMECPPGRCPTLRGASKHCKNNAIQTKTFPATEVFRTFEGRGWGLRLAEERGAEAGTLLHEYLGEVIMMDECRRRLRKVGRKGVEGSSGDFYFASLDGNLVLDGGPMGGEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLGGFVERQKCLCGEPQCSGFIGGELVAVKAEEWQRRASKVMNQAKPQLDVVRELFHEGRELGYELSGEGGXXXXXXXXXXXNSISAAGSGPTRYQGREMECLSILLREGDEWLEELSHVMEGTTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVLPRRASTRAGRGERKPRDA--DXXXXXXXXKVGDGEESNPDAPRVVDLVQLEKVVQRAPTGLQIPEAVKAKKTVARASHVAQTVWALLDAASKHGLQGIRVPEERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGMVGRLAEKDKGRRGGRGAVGGXXXXXXXXGSEGDHDAMMTEVSGXXXXXXXXXXPAGAESNGDATIEVRGDGSTADGSSSSSDEPNGGDGGQQLVPLEGPCGSRDDEAEPAADAGTPGGETDXXXXXXXXXXXXXXXXXCSPDCGEELAATVVGTAAVSRADGDNNGSLEQGAVKPAAGLSPRVAVATRSGGKRKPSAALXXXXXXXXXXXXXXXXXXXXXXXLADGSSPAPPPKPKMSQVCQAIRSCRGLAHVFIPGASELEKLVAPAEAWAKEACDMLKIKVSDPAKDDQATGGAAAXXXXKVKDCXXXXXXXXXXERGKWARLGLEGSAMTALEEKLQDVAEFSLAREQREEEVEKERLQREKEDAXXXXXQARLEKLARLKALSKRRNARRGVGGVSTNTAERGGGAAGXXXXXXXXXXXSREEAVRAREARRSPRIVSLGSSGAPSTADPATAQKEEEEGEGIGD----AEEAGWTKEDEEALHCLCRLPADAARFRTLMTCDLCSSWFHPSCVRLKELPKRSLRGDRHHQAPALAFVCPMCEHRRGGVSNFACPPSPGFYIGRRMHRPGLSELETLMRHADSLPVDGVDGQAYLNYMVDQVVGWRDRCEDAVKEFQAYIQGGDTAGATAMREGTPXXXXX-SAGLVLASAGRRLGVEASLVERLGRLVCEGALIEVVDVHKEDTMLRRALWTLTASLCFPQAAACLRLGQEPG 4491
MSSMTISPRLQAKEIARREQAEHQKNRSQSG XX TAQS PPAEEEAAAKRPRTSTPKARPPAPSKAGSIRHARPAKQLGGETPPEG K VG KG A R PGSAKTNS XXXXXXXXXXXXXXXX EQRE+KG SRG+ APCGKRAQ SERAASTGARKVAAKKASMSSPPA +GN RGAAP KG LPPQSNLG AFGKGPSAKQRKLFKLSKSLLPLGIWPSSGESEAFDIAPEWKASLLKRYENPPPYRKLKANLYEDSSLKGLVPVDEIPLCNCRPEDGCDASCINRLLLMEC PGRCPTLRGASK+C NNAIQTKTFPATEVFRTFEGRGWGLRLAEERGAEAGTLLHEYLGEVIMMDECRRRLRKVGRKGVEGSSGDFYFASLDGNLVLDGGPMGGEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLGGFVERQKCLCGEPQCSGFIGGELVAVKAEEWQRRASKVMNQAKPQL+VVRELFHEGRELGYELS EGG EG EE + E+ RR STRAGRGERKPRDA D KVG+GEESNP APRVVDL+QLEKVVQ PTGLQIPEAVKAKKTV E R GA+ G A V +A PA G G T XXXXXXXXXXXXXXXXX +NG+LEQGAVKPAAGL PRV VATRSGGKRKPSAAL LADGS PA PPKPKMSQVCQAIRSCRGLAHVFIPGASELEKLVAPAEAWAKEACDMLKIKVSDP+ DD ATGGAAA KVKDC ERGKWARLGLEGSAMTALEEKLQDVAEFSLAREQREEE EKERLQREKEDAXXXXX ARLEKLARLKALSKRRNA RGV GVST+TAERGGGAAG XXXX SREEAVRAREARRSPRIVSLGSSGAPSTADPAT QKEE EGEGIGD AEEAGWTKEDEEALHCLCRLPADAARFRTLMTCDLCSSWFHPSCVRLKELPKRSL RHH+APALAFVCPMCEHRRGGVSNFACPPSPGFYIGRRMHRPGLSELE LMRHADSLPVDGVDGQAYLNYMVDQVVGWRDRCEDAVKEFQAYIQGGDTA ATAMREGTPXXXXX SAGLVLASAGRRLG EASLVERLGRLVCEG LIEVVDVHKEDTMLRRALWTLTASLC P+AAACLRLGQEPG
Sbjct: 1 MSSMTISPRLQAKEIARREQAEHQKNRSQSGXXXXRTAQSPPPAEEEAAAKRPRTSTPKARPPAPSKAGSIRHARPAKQLGGETPPEGKKKVGPMKGAAIRPPGSAKTNSSRAXXXXXXXXXXXXXXXXDGPEQRERKGQSRGEPAPCGKRAQASERAASTGARKVAAKKASMSSPPAARGNGSSSKG------RGAAPRKGNLPPQSNLGIAFGKGPSAKQRKLFKLSKSLLPLGIWPSSGESEAFDIAPEWKASLLKRYENPPPYRKLKANLYEDSSLKGLVPVDEIPLCNCRPEDGCDASCINRLLLMECAPGRCPTLRGASKYCNNNAIQTKTFPATEVFRTFEGRGWGLRLAEERGAEAGTLLHEYLGEVIMMDECRRRLRKVGRKGVEGSSGDFYFASLDGNLVLDGGPMGGEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLGGFVERQKCLCGEPQCSGFIGGELVAVKAEEWQRRASKVMNQAKPQLEVVRELFHEGRELGYELSDEGGG------------------------------------EGSVGFEETA--------------------------------VHPPPAAGELPRRRTSTRAGRGERKPRDAHDDDDDHVGGGKVGEGEESNPGAPRVVDLIQLEKVVQTVPTGLQIPEAVKAKKTVG---------------------------ESR--------------------------------------------------------------------------------------------------GADGVGPARRRV--------------------------------------QARPAGHQGA--GRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSSNGNLEQGAVKPAAGLPPRVTVATRSGGKRKPSAALSAAGVAERKQLVTPAATATKSS-LADGS-PALPPKPKMSQVCQAIRSCRGLAHVFIPGASELEKLVAPAEAWAKEACDMLKIKVSDPSTDDSATGGAAAAGG-KVKDCDRGRDGEK--ERGKWARLGLEGSAMTALEEKLQDVAEFSLAREQREEEAEKERLQREKEDAXXXXXXARLEKLARLKALSKRRNAPRGVRGVSTSTAERGGGAAGDDVXXXXAEGGSREEAVRAREARRSPRIVSLGSSGAPSTADPATGQKEEGEGEGIGDEAEEAEEAGWTKEDEEALHCLCRLPADAARFRTLMTCDLCSSWFHPSCVRLKELPKRSLLDGRHHEAPALAFVCPMCEHRRGGVSNFACPPSPGFYIGRRMHRPGLSELEALMRHADSLPVDGVDGQAYLNYMVDQVVGWRDRCEDAVKEFQAYIQGGDTAEATAMREGTPXXXXXXSAGLVLASAGRRLGFEASLVERLGRLVCEGVLIEVVDVHKEDTMLRRALWTLTASLCLPRAAACLRLGQEPG 1247
BLAST of mRNA_E-siliculosus-1a_F_contig1057.411.1 vs. uniprot
Match: A0A6H5JSL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL4_9PHAE) HSP 1 Score: 1361 bits (3522), Expect = 0.000e+0 Identity = 839/1124 (74.64%), Postives = 866/1124 (77.05%), Query Frame = 1 Query: 1285 MGGEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLGGFVERQKCLCGEPQCSGFIGGELVAVKAEEWQRRASKVMNQAKPQLDVVRELFHEGRELGYELSGEGGXXXXXXXXXXXNSISAAGSGPTRYQGREMECLSILLREGDEWLEELSHVMEGTTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EVLPRRASTRAGRGERKPRDA-DXXXXXXXXKVGDGEESNPDAPRVVDLVQLEKVVQRAPTGLQIPEAVKAKKTVARASHVAQTVWALLDAASKHGLQGIRVPEERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KAGMVGRLAEKDKGRRGGRGAVGGXXXXXXXXGSEGDHDAMMTEVSGXXXXXXXXXXPAGAESNGDATIEVRGDGSTADGSSSSSD-----EPNGGDGGQQLVPLEGPCGSRDDEAEPAADAGTPGGETDXXXXXXXXXXXXXXXXXCSPDCGEELAATVVGTAAVSRADGDNNGSLEQGAVKPAAGLSPRVAVATRSGGKRKPSAALXXXXXXXXXXXXXXXXXXXXXXXLADGSSPAPPPKPKMSQVCQAIRSCRGLAHVFIPGASELEKLVAPAEAWAKEACDMLKIKVS--------------DPAKDDQATGGAAAXXXXKVKDCXXXXXXXXXXERGKWARLGLEGSAMTALEEKLQDVAEFSLAREQREEEVEKERLQREKEDAXXXXXQARLEKLARLKALSKRRNARRGVGGVSTNTAERGGGAAGXXXXXXXXXXXSREEAVRAREARRSPRIVSLGSSGAPSTADPATAQKEEEEGEGIGDAEEAGWTKEDEEALHCLCRLPADAARFRTLMTCDLCSSWFHPSCVRLK--------------------------------ELPKRSLRGDRHHQAPALAFVCPMCEHRRGGVSNFACPPSPGFYIGRRMHRPGLSELETLMRHADSLPVDGVDGQAYLNYMVDQVVGWRDRCEDAVKEFQAYIQGGDTAGATAMREGTPXXXXXSAGLVLASAGRRLGVEASLVERLGRLVCEGALIEVVDVHKEDTMLRRALWTLTASLCFPQAAACLRLGQEPG 4491
MG EARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTL GFVERQKCLCGEPQCSGFIGGE RRASKVMNQAKPQL+VVRELFHEGRELGYELS +GG XXXX AAGSGPT Y+GREMECLSI+LREGDEWLEEL+ VMEGTTIAXXXXXXXXXXX E+ RRASTRAGRGERKPRDA DXXXXXXXXKVG+GEESNPDAPRVVDLVQLEKVVQ +PTGLQIPEAVKAKKT+ARASHVAQTVW LLDAASK+GL+ IRVPEERQ XXXXXXXXXXXX KA +VGRL EKDK XXXXXXXX SEGDHDAMM E+ G PAGA+SN DAT+EVRGDGSTADGS EPNGGDGGQQLVPLEG CGSRDDEAEPAADAGTPGG TD XXXXX SPDCGE LAATV TAA RADGDNNG+LEQGA KPAAGLSPRVAVATRSGGKRKPSAAL +ADGS PA PPKPKMSQVCQAIRSCRGLA+VFIPGA ELEKLVAPAEAWAKEACDMLKIK S DP+ DD ATGGAAA KVKDC ++ KWARLGLEGSAMTALEEKLQDVAEFSLAREQREEEVEKERLQREKEDAXXXXXQARLEKLARLKALSKRRNA R VGG ST TAERGGGAAG SREEAVRARE RRSPRIVSLGSSGAPSTADPATA+KEE EGEGIGDAEEAGWTKEDEEALHCLCRLPADAARFRTLMTCDLCSSWFHPSCVRLK ELPKRSLRG HHQAPALAFVCPMCEHRRGGVSNFACPPSPGFYIGRRMHRPGLSELETLMR+ADSLPVDGVDGQAYLNYMV QVVGWRDRCEDAVK+FQAYIQGGDTA ATAM+ GTP SAGLVLASAGRRLG EASLVERLGRLVCEGALIEVVDVHKEDTMLRRALWTLTASLCFP+A +CLRLGQEPG
Sbjct: 1 MGSEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLEGFVERQKCLCGEPQCSGFIGGE----------RRASKVMNQAKPQLEVVRELFHEGRELGYELSDKGGGEGEAGDXXXXXXXXAAGSGPTHYKGREMECLSIMLREGDEWLEELARVMEGTTIAXXXXXXXXXXXRKYGTGAVGVEETAVQPPPAAGELPRRRASTRAGRGERKPRDAYDXXXXXXXXKVGEGEESNPDAPRVVDLVQLEKVVQASPTGLQIPEAVKAKKTLARASHVAQTVWTLLDAASKNGLKSIRVPEERQPPXXXXXXXXXXXXPQLATSNPASGGACPSVPAAASSSSKAAIVGRLDEKDKXXXXXXXXXXXXXXXXXXXXSEGDHDAMMPEIGGGGSGITGAAAPAGAKSNDDATMEVRGDGSTADGSXXXXXXXXXXEPNGGDGGQQLVPLEGRCGSRDDEAEPAADAGTPGGGTDDSPVVATGACSGXXXXXSSPDCGEVLAATVAATAADWRADGDNNGNLEQGADKPAAGLSPRVAVATRSGGKRKPSAALSVAGVALRKRLVPPAATATTSS-MADGS-PALPPKPKMSQVCQAIRSCRGLANVFIPGAPELEKLVAPAEAWAKEACDMLKIKASRMNSTGTSNDEEVLDPSTDDPATGGAAAAGG-KVKDCDRDREGEK--DKSKWARLGLEGSAMTALEEKLQDVAEFSLAREQREEEVEKERLQREKEDAXXXXXQARLEKLARLKALSKRRNAPRAVGGASTITAERGGGAAGDAVGGGSGGRASREEAVRARETRRSPRIVSLGSSGAPSTADPATARKEEAEGEGIGDAEEAGWTKEDEEALHCLCRLPADAARFRTLMTCDLCSSWFHPSCVRLKDEKARHHVCLERSQAAPQLTPRPATSLETAVQELPKRSLRGGYHHQAPALAFVCPMCEHRRGGVSNFACPPSPGFYIGRRMHRPGLSELETLMRNADSLPVDGVDGQAYLNYMVVQVVGWRDRCEDAVKDFQAYIQGGDTAEATAMKGGTPTPPTPSAGLVLASAGRRLGFEASLVERLGRLVCEGALIEVVDVHKEDTMLRRALWTLTASLCFPKATSCLRLGQEPG 1109
BLAST of mRNA_E-siliculosus-1a_F_contig1057.411.1 vs. uniprot
Match: A0A6H5JWD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD3_9PHAE) HSP 1 Score: 309 bits (791), Expect = 3.590e-92 Identity = 209/284 (73.59%), Postives = 214/284 (75.35%), Query Frame = 1 Query: 109 QAEHQKNRSQSGRRXXXTAQSAPPAEEEAAAKRPRTSTPKARPPAPSKAGSIRHARPAKQLGGETPPEGNK-VGSKKGTANRAPGSAKTNSXXXXXXXXXXXXXXXXXXX-EQREKKGWSRGKLAPCGKRAQVSERAASTGARKVAAKKASMSSPPAGQGNXXXXXXXXXXXXRGAAPHKGKLPPQSNLGRAFGKGPSAKQRKLFKLSKSLLPLGIWPSSGESEAFDIAPEWKASLLKRYENPPPYRKLKANLYEDSSLKGLVPVDEIPLCNCRPEDGCDASCI 954
QAEHQKNRSQS XXX AKRPRTSTPKARPPAPSKAGSIRHARPAKQLGGETP GNK VGSKKG ANR PGSAKT+SXXXXXXXXXXXXXXXXXX EQRE+KG SRGK PCGKRAQVS+RAASTGARK SNLG+AFGKGPSAKQRKLFKLSKSLLPLGIWPSS ES AFDIAPEWKASLLKRYENPPPYRKLKANLYEDSSLKGLVPVDEIPLCNCRPEDGCDA+CI
Sbjct: 24 QAEHQKNRSQSXXXXXXXXXXXXXXXXXXXAKRPRTSTPKARPPAPSKAGSIRHARPAKQLGGETPQAGNKKVGSKKGAANRTPGSAKTDSXXXXXXXXXXXXXXXXXXCPEQRERKGRSRGKPEPCGKRAQVSKRAASTGARK------------------------------------------SNLGKAFGKGPSAKQRKLFKLSKSLLPLGIWPSSSESGAFDIAPEWKASLLKRYENPPPYRKLKANLYEDSSLKGLVPVDEIPLCNCRPEDGCDANCI 265
BLAST of mRNA_E-siliculosus-1a_F_contig1057.411.1 vs. uniprot
Match: A0A835Z6U8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6U8_9STRA) HSP 1 Score: 325 bits (832), Expect = 1.860e-86 Identity = 173/379 (45.65%), Postives = 221/379 (58.31%), Query Frame = 1 Query: 721 LSKSLLPLGIWPSSGESEAFDIAPEWKASLLKRYENPPPYRKLKANLYEDSSLKGLVPVDEIPLCNCRPEDGCDASCINRLLLMECPPGRCPTLRGAS---KHCKNNAIQTKTFPATEVFRTFEGRGWGLRLAEE-RGAEAGTLLHEYLGEVIMMDECRRRLRKVGRKGVEGSSGDFYFASLDGNLVLDGGPMGGEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLGGFVERQKCLCGEPQCSGFIGGELVAVKAEEW---------------QRRASKVMNQAKPQLDVVRELFHEGRELGYELSGEGGXXXXXXXXXXXNSISAAGSGPTRYQGREMECLSILLREGDEWLEELSHVME 1800
L L LGIWP +E + + L+ P Y+K++ N Y D++LKGLV E C C P C C+NR L+ EC PGRCPTLRG + ++C+N+AIQ + +P TE FRT +GRGWGLRL AGTLL EY+GEVI +DEC+RRL+++G++G GDFYFASLDG L+LD GPMG EARFANHSC+PNC +QKWSV+GETRVV+ A R + GEELTYNY+ADTL G V RQ+CLCG P+C G IGG L + + RA +V+ Q P+ L EGR LG +AA +GRE+ECL++L REG+ WL V +
Sbjct: 101 LGSGALALGIWPDDSMAEPYLPPLDMLKERLRELLPEPDYKKIRTNQYPDAALKGLVAAKECSTCCCEPGGHCLDDCLNRRLMQECLPGRCPTLRGLTDGRRYCENSAIQERRYPPTEAFRTSDGRGWGLRLCTTAEPVTAGTLLKEYVGEVISVDECKRRLKQLGKRG---KRGDFYFASLDGQLILDAGPMGNEARFANHSCAPNCELQKWSVMGETRVVMAAKRTLQPGEELTYNYRADTLDGCVTRQRCLCGAPRCPGLIGGTLRSAXXXXXXXXXXXXXXXXXXXXRERAVRVLRQRLPRFSEAAALLEEGRALG---------------------AAAA-------RGRELECLAVLEREGEAWLRAREGVFD 448
BLAST of mRNA_E-siliculosus-1a_F_contig1057.411.1 vs. uniprot
Match: A0A4D9DD50_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DD50_9STRA) HSP 1 Score: 278 bits (712), Expect = 2.860e-72 Identity = 160/336 (47.62%), Postives = 198/336 (58.93%), Query Frame = 1 Query: 646 KLPPQSNLGRAFGKGPS--AKQRKLFKLSKSLLPLGIWPSSGESEAFDIAPEWKASLLKRYENPPPYRKLKANLYEDSSLKGLVP--VDEIPLCNCRPE-DGCDASCINRLLLMECPPGRCPTLRGASKHCKNNAIQTKTFPATEVFRTFEGRGWGLRLAEERGAEAGTLLHEYLGEVIMMDECRRRLRKVGRKGVEGSSGDFYFASLDGNLVLDGGPMGGEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLGGFVERQKCLCGEPQCSGFIGG--ELVAVKAEEWQRRASKVMNQAKPQLDVVRELFHEGRELGYEL 1632
+L Q LG+A K + A L+ S LP P + FD+ EW L + E PP YR L+ NLY SL+ DE+PLC+CRP+ GCD C+NR L MECP GRCP+LR +C+N IQ FPATEVFRT +GRGW LR EE E GTLL EY GEV+ M+E + R+R + + D+YFA+L+G LVLD GPMG EARFANHSC+PNC++QKW GE ++LVAAR + GEE+TYNYQ DTL G +Q C CG CSG IG E E W+ RA+ + P L+ V L EG E G EL
Sbjct: 98 QLKKQGKLGKATRKAKTRTADSPTSHSLAFSPLPCPAMPPA----EFDLPEEW--IRLVQSEPPPKYRLLRQNLYSHPSLRPRTAGREDEVPLCSCRPDAGGCDHRCMNRQLFMECPVGRCPSLRDGELYCENMVIQQGQFPATEVFRT-QGRGWALRTREE--VEKGTLLIEYRGEVVTMEEAQTRMRSMS------AGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRMGAGEEVTYNYQVDTLAGMFGQQACRCGAKNCSGLIGKRPEGKGEDWEGWKERAAACLAMRAPSLEAVEALVQEGEE-GVEL 417
BLAST of mRNA_E-siliculosus-1a_F_contig1057.411.1 vs. uniprot
Match: A0A7R9U2M8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2M8_9STRA) HSP 1 Score: 200 bits (509), Expect = 2.380e-54 Identity = 108/243 (44.44%), Postives = 142/243 (58.44%), Query Frame = 1 Query: 934 GCDASCINRLLLMECPPGRC----PTLRGASK-------HCKNNAIQTKTFPATEVFRTFEGRGWGLRLAEERGAEAGTLLHEYLGEVIMMDECRRRLRKVGRKGVEGSSGDFYFASLDGNLVLDGGPMGGEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLGGFVERQKCLCGEPQCSGFIGGELVAVKAEEWQRRASKVMNQAKPQLDVVRELFHEGRELGYE 1629
G + C+NR L MECP G C P L + +C N A+Q + FPAT+V+ T + G+GLR E AGT++ EYLGEVI +ECR RL G + D+YFASL G VLD GPMG +ARFANHSCSPNC +Q W+VLGE RV LVA RDI E L YNY++D L G V Q C CG C G IGG + ++W+ A++ + + +L+ ++ L +LG +
Sbjct: 8 GPKSDCVNRRLFMECPSGACCSLGPALSSGNSQPDTRRANCGNVALQVRQFPATDVYWT-KTCGFGLRALE--AFPAGTIVEEYLGEVITTEECRTRL------GTYTENQDYYFASLTGPYVLDAGPMGSKARFANHSCSPNCALQVWNVLGEPRVALVAIRDIRANEHLCYNYRSDDLNGEVSLQSCRCGSLNCCGVIGGRVEESDLQKWETDATRCLGLQRAKLESLQALIAHAEQLGVD 241
BLAST of mRNA_E-siliculosus-1a_F_contig1057.411.1 vs. uniprot
Match: W7TZX2_9STRA (Histone-lysine n-h3 lysine-36 and h4 lysine-20 specific n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZX2_9STRA) HSP 1 Score: 175 bits (443), Expect = 7.460e-47 Identity = 86/151 (56.95%), Postives = 104/151 (68.87%), Query Frame = 1 Query: 1036 IQTKTFPATEVFRTFEGRGWGLRLAEERGAEAGTLLHEYLGEVIMMDECRRRLRKVGRKGVEGSSGDFYFASLDGNLVLDGGPMGGEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLGGFVERQKCLCGEPQC 1488
IQ FPATEVFRT +GRGW LR EE E GTLL EY GEV+ M+E + R+R + + D+YFA+L+G LVLD GPMG EARFANHSC+PNC++QKW GE ++LVAAR + GEE+TYNYQ DTL G +Q C CG C
Sbjct: 3 IQQGKFPATEVFRT-QGRGWALRTREE--VEKGTLLIEYRGEVVTMEEAQTRMRSMS------AGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNC 144
BLAST of mRNA_E-siliculosus-1a_F_contig1057.411.1 vs. uniprot
Match: A0A8B9L714_ASTMX (Nuclear receptor binding SET domain protein 3 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9L714_ASTMX) HSP 1 Score: 185 bits (470), Expect = 1.110e-45 Identity = 100/249 (40.16%), Postives = 139/249 (55.82%), Query Frame = 1 Query: 829 PPPYRKLKANLYEDSSLKGLVPVDEIPLCNCRPED----GCDASCINRLLLMECPPGRCPTLRGASKHCKNNAIQTKTFPATEVFRTFEGRGWGLRLAEERGAEAGTLLHEYLGEVIMMDECRRRLRKVGRKGVEGSSGDFYFASLDGNLVLDGGPMGGEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLGGFVERQKCLCGEPQCSGFIGGELVAVKAEEWQRRASKVMN 1563
PPPY+ +KAN + + E+P CNCRP D G D+ C+NR+L EC P CP A++ C N + + +P TEV +T GRGWGL+ ++ + G + EY+GE+I ++ECR+R+ + + +FY +L + V+D GP G +RF NHSCSPNC QKW+V G+ R+ L DI+ ELT+NY D LG R C CG CSGF+G V K+ R KV N
Sbjct: 219 PPPYKLIKANKPVGKVQVHVADLSEVPRCNCRPTDERPCGQDSQCLNRMLQYECHPQVCP----AAERCLNQSFSKRVYPDTEVIKT-SGRGWGLKTKQD--LKKGDFIMEYVGELIDLEECRQRISHANKNHIT----NFYMLTLTKDRVIDAGPKGNLSRFMNHSCSPNCETQKWTVNGDIRIGLFTLCDIAADTELTFNYNLDCLGN--GRTSCHCGAENCSGFLG---VRPKSAVVMEREEKVKN 451
BLAST of mRNA_E-siliculosus-1a_F_contig1057.411.1 vs. uniprot
Match: A0A8M1KMV9_CLUHA (histone-lysine N-methyltransferase NSD3 n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A8M1KMV9_CLUHA) HSP 1 Score: 189 bits (480), Expect = 1.360e-44 Identity = 113/279 (40.50%), Postives = 154/279 (55.20%), Query Frame = 1 Query: 829 PPPYRKLKANLYEDSSLKGLVPVDEIPLCNCRPED----GCDASCINRLLLMECPPGRCPTLRGASKHCKNNAIQTKTFPATEVFRTFEGRGWGLRLAEERGAEAGTLLHEYLGEVIMMDECRRRLRKVGRKGVEGSSGDFYFASLDGNLVLDGGPMGGEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLGGFVERQKCLCGEPQCSGFIGGE--LVAVKAEEWQRRASKVMNQAKPQLDVVRELFHEGRELGYELSGEGG 1647
PPPY+ +K+N + + EIP CNCRP D G D C+NR+L EC P CP+ ++ C N + + +P TEVF+T + RGWGL+ ++ + G + EY+GE+I +ECR+R+R+ V +FY +L + +D GP G ARF NHSCSPNC QKW+V GE R+ L DI ELT+NY D LG R C CG CSGF+G + V V +E + R SK+ KP+ R+L EG+E GEGG
Sbjct: 1258 PPPYKLIKSNKPVGKVQVHVADLTEIPRCNCRPSDERPCGQDTQCLNRVLQYECHPQACPS----AERCHNQSFSRRHYPDTEVFKTHD-RGWGLKTRQD--LKKGDFVMEYVGELIDSEECRQRIRQAHENHVT----NFYMLTLTKDRFIDAGPKGNVARFINHSCSPNCETQKWTVDGEVRIGLFTLCDIPADAELTFNYNLDCLGN--GRTSCHCGAENCSGFLGVQPKSVVVMEKEEKVRNSKL----KPR---KRKLKPEGQEYCCFCCGEGG 1516
BLAST of mRNA_E-siliculosus-1a_F_contig1057.411.1 vs. uniprot
Match: UPI0014032F31 (histone-lysine N-methyltransferase NSD2-like n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014032F31) HSP 1 Score: 189 bits (480), Expect = 1.740e-44 Identity = 101/260 (38.85%), Postives = 143/260 (55.00%), Query Frame = 1 Query: 829 PPPYRKLKANLYEDSSLKGLVPVDEIPLCNCRPED----GCDASCINRLLLMECPPGRCPTLRGASKHCKNNAIQTKTFPATEVFRTFEGRGWGLRLAEERGAEAGTLLHEYLGEVIMMDECRRRLRKVGRKGVEGSSGDFYFASLDGNLVLDGGPMGGEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLGGFVERQKCLCGEPQCSGFIGGELVAVKAEEWQRRASKVMNQAKPQLDVVRE 1596
PPPY+ +K N + EIP CNC+P D G D+ C+NR+LL EC P CP A C N + +P E+FR+ E +GWGLR + + G ++EY+GE+I +ECR R++ + +FY ++D + ++D GP G +RF NHSC PNC QKW+V G+TRV L A DI G ELT+NY D LG E+ C+CG P CSGF+G V K+ ++ + + K + D V +
Sbjct: 1515 PPPYKHVKVNKPVGRVQIYAADLSEIPRCNCKPADESPCGLDSECLNRMLLYECHPTVCP----AGHRCHNQCFNKRIYPDAEIFRS-ENKGWGLRA--KANIKKGEFVNEYVGELIDEEECRARIKHAHEHHLT----NFYMLTIDKDRIIDAGPKGNFSRFMNHSCQPNCETQKWTVNGDTRVGLFAVSDIPCGTELTFNYNLDCLGN--EKTVCMCGAPNCSGFLG---VRPKSAVVDKKPKRKYRKRKVRADKVHD 1758 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1057.411.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1057.411.1 >prot_E-siliculosus-1a_F_contig1057.411.1 ID=prot_E-siliculosus-1a_F_contig1057.411.1|Name=mRNA_E-siliculosus-1a_F_contig1057.411.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1497bp SVQACTCVSPWAHDLANMSSMTISPRLQAKEIARREQAEHQKNRSQSGRRback to top mRNA from alignment at E-siliculosus-1a_F_contig1057:19194..37986+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1057.411.1 ID=mRNA_E-siliculosus-1a_F_contig1057.411.1|Name=mRNA_E-siliculosus-1a_F_contig1057.411.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=18793bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1057:19194..37986+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1057:19194..37986+ >mRNA_E-siliculosus-1a_F_contig1057.411.1 ID=mRNA_E-siliculosus-1a_F_contig1057.411.1|Name=mRNA_E-siliculosus-1a_F_contig1057.411.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=8982bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1057:19194..37986+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |