Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 0 |
| Cds size | 237 |
| Model size | 237 |
| Exons | 1 |
| Ec32 ortholog | Ec-21_000690.1 |
| Ec32 ortholog description | hypothetical protein |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927558.2450438-CDS-E-siliculosus-1a_F_contig1056:27612..27849 | 1622927558.2450438-CDS-E-siliculosus-1a_F_contig1056:27612..27849 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1056 27613..27849 + |
| 1696318585.1605399-CDS-E-siliculosus-1a_F_contig1056:27612..27849 | 1696318585.1605399-CDS-E-siliculosus-1a_F_contig1056:27612..27849 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1056 27613..27849 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1056.405.1 >prot_E-siliculosus-1a_F_contig1056.405.1 ID=prot_E-siliculosus-1a_F_contig1056.405.1|Name=mRNA_E-siliculosus-1a_F_contig1056.405.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=79bp
STGYKNASPSALARELTTLRTMEKHHSSAAAPAPPMQPDADVGGGGDAGS
SGVCAITLDSLSAREEEVLGVVFGAGSAI back to topmRNA from alignment at E-siliculosus-1a_F_contig1056:27613..27849+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1056.405.1 ID=mRNA_E-siliculosus-1a_F_contig1056.405.1|Name=mRNA_E-siliculosus-1a_F_contig1056.405.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=237bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1056:27613..27849+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGTACAGGCTACAAGAACGCCAGTCCCTCCGCTCTCGCTAGGGAGCTAAC
AACCTTGAGGACGATGGAGAAACACCACAGCTCGGCAGCCGCGCCCGCAC
CTCCGATGCAGCCGGATGCCGATGTTGGTGGCGGCGGCGACGCCGGCAGC
AGCGGCGTATGCGCAATTACCCTGGACTCTTTGAGCGCGCGGGAAGAAGA
AGTCTTGGGGGTCGTCTTTGGTGCCGGGTCGGCAATC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1056:27613..27849+ >mRNA_E-siliculosus-1a_F_contig1056.405.1 ID=mRNA_E-siliculosus-1a_F_contig1056.405.1|Name=mRNA_E-siliculosus-1a_F_contig1056.405.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=474bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1056:27613..27849+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGTACAGGCTACAAGAACGCCAGTCCCTCCGCTCTCGCTAGGGAGCTAAC
AACCTTGAGGACGATGGAGAAACACCACAGCTCGGCAGCCGCGCCCGCAC
CTCCGATGCAGCCGGATGCCGATGTTGGTGGCGGCGGCGACGCCGGCAGC
AGCGGCGTATGCGCAATTACCCTGGACTCTTTGAGCGCGCGGGAAGAAGA
AGTCTTGGGGGTCGTCTTTGGTGCCGGGTCGGCAATCAGTACAGGCTACA
AGAACGCCAGTCCCTCCGCTCTCGCTAGGGAGCTAACAACCTTGAGGACG
ATGGAGAAACACCACAGCTCGGCAGCCGCGCCCGCACCTCCGATGCAGCC
GGATGCCGATGTTGGTGGCGGCGGCGACGCCGGCAGCAGCGGCGTATGCG
CAATTACCCTGGACTCTTTGAGCGCGCGGGAAGAAGAAGTCTTGGGGGTC
GTCTTTGGTGCCGGGTCGGCAATC back to top
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