mRNA_E-siliculosus-1a_F_contig1054.393.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1054.393.1 vs. uniprot
Match: D8LLS9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS9_ECTSI) HSP 1 Score: 669 bits (1726), Expect = 2.570e-235 Identity = 360/413 (87.17%), Postives = 365/413 (88.38%), Query Frame = 1 Query: 688 RFRFRYLKFPLYGLAALQIQYAWRNYQQNTIYDMSTREIVSAECLSSLERGSSLLREDGECSANRQQSEGMLTASLESCAAKTIQTCWRSRVSKSIYRYYRNVIDFRLGGDPRLLLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKVYTHQPVADIGAFAPRAYSEDAKDTPADRWNHPPMTGYPENPKAGQIRVGASYFGTAVKRTGPQGTKNWYRRQENNGWRPITIKALPSAEDDPVTIDTAKKHASRSGSGGESGDGLRPGXXXXXXXFHYSKLVREECRAARMKRRKRRWLMSMYSAGLAETAXXXXXXXXXEVEGAGTAANDDGGPFSHRFRAEQMQQRRERDGHHHSRGGMGGKDAPGWEGGGDWGMDWDWAGLHRQQGSTAAGRESEDDAALLVRWSKAL 1926 +FRFRYLKFPLYGLAALQIQYAWRNYQQNTIYDMSTREIVSAECLSSLERGSSLL+EDGECSANRQQS GMLTASLESCAAKTIQTCWRSRVSKSIYRYYRNVIDFRLGGDPRLLLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKVYTHQPVADIGAFAPRAYSEDAKDTPADRWNHPPMTGYPENPKAGQIRVGASYFGTAVKRTGPQGTKNWYRRQENNGWRPITIKAL SAEDDPVTIDTA+KHASRSGSGGE GDGLRPGXXXXXXXFHYSKL KRRWLMSMYSAGLAETA XXXXXXXX PFSH+ RA RGGMGGKDAPGWEGGGDWGMDWDW GLHRQQG+TAAGRESEDDAALLVRWSKAL Sbjct: 92 KFRFRYLKFPLYGLAALQIQYAWRNYQQNTIYDMSTREIVSAECLSSLERGSSLLQEDGECSANRQQSGGMLTASLESCAAKTIQTCWRSRVSKSIYRYYRNVIDFRLGGDPRLLLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKVYTHQPVADIGAFAPRAYSEDAKDTPADRWNHPPMTGYPENPKAGQIRVGASYFGTAVKRTGPQGTKNWYRRQENNGWRPITIKALSSAEDDPVTIDTARKHASRSGSGGEGGDGLRPGXXXXXXXFHYSKL-------------KRRWLMSMYSAGLAETATXXXXXXXXXXXXXXXXXXXXXXPFSHQSRAXXXXXXXXXXXXXXYRGGMGGKDAPGWEGGGDWGMDWDWEGLHRQQGNTAAGRESEDDAALLVRWSKAL 491
BLAST of mRNA_E-siliculosus-1a_F_contig1054.393.1 vs. uniprot
Match: A0A7S2RW27_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW27_9STRA) HSP 1 Score: 253 bits (647), Expect = 2.790e-73 Identity = 151/367 (41.14%), Postives = 194/367 (52.86%), Query Frame = 1 Query: 532 GSTRQLDKYLRHVAEDEAAHGSGXXXXXXEAGGGYSEWCGRRIQAWWRMVDARFRFRYLKFPLYGLAALQIQYAWRNYQQNTIYDMSTREIVSAECLSSLERGSSLLREDGECSANRQQSEGMLTASLESCAAKTIQTCWRSRVSKSIYRYYRNVIDFRLGGDPRLLLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKVYTHQPVADIGAFAPRAYSEDAKDTPADRWNHPPMTGYPENPK--AGQIRVGASYFGTAVKRTGPQGTKNWYRRQENNGWRPITIKALPSA--EDDPVTIDTAKKHASRSGSGGESGDGLRPGXXXXXXXFHYSKLVREECRAARMKRRKRRWLMSMYSAGLAE 1620 G T L KYL + EA G A GG++ WC R+QAWWRMV R L+ +Y +AALQIQ++WR YQQ M + S+ + E AA +IQ CWRS + +YRYYR++I FRL G+P +LLR INP EAALFD+A GVHVRFRLGG +FPP++YYKV+ +P+ D+GAFAPR Y+ + D +HP +GQIRVG SYFGT V GP+G NWYRR ENN WRPIT + L E P + T ++ A G FHYS++ R++ R K +KR+WLM MY GLA+ Sbjct: 29 GETPMLAKYLGFMRHYEA----GGFSLPAFASGGFAVWCAARLQAWWRMVHVRSNRAMLQHAVYQIAALQIQFSWREYQQERYLQMEDHRHATHAIARSIR-------------------------TPEDLAAISIQHCWRSHANTRVYRYYRDLIQFRLTGNPAMLLRTINPREAALFDKATGVHVRFRLGGSSFPPALYYKVFLSRPLCDVGAFAPRDYTGEKLPQARDLHSHPSRDDLNSASTVISGQIRVGGSYFGTVVD-MGPEGMDNWYRRVENNDWRPITYRVLRDVGGEAPPGAVSTEERLAMEQG-----------------VAFHYSRVKRQDEVRQRRKAKKRQWLMQMYKDGLAK 348
BLAST of mRNA_E-siliculosus-1a_F_contig1054.393.1 vs. uniprot
Match: A0A329S981_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S981_9STRA) HSP 1 Score: 223 bits (567), Expect = 5.010e-62 Identity = 145/451 (32.15%), Postives = 209/451 (46.34%), Query Frame = 1 Query: 274 PWRSVFARKPRSSRRAIVAAPWTSPVAAHHLAAVQIQRHVRGFIANRSVARHGTTNRAGGRNSRAKTEADTATRRRGSGRRRSRAGGSTRQLDKYLRHVAEDEAAHGSGXXXXXXEAGGGYSEWCGRRIQAWWRMVDARFRFRYLKFPLYGLAALQIQYAWRNYQQNTIYDMSTREIVSAECLSSLERGSSLLREDGECSANRQQSEGMLTASLESCAAKTIQTCWRSRVSKSIYRYYRNVIDFRLGGDPRLLLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKVYTHQPVADIGAFAPRAYSEDAKDTPADRWNHPPMTGYPENPKAGQIRVGASYFGTAVKRTGPQGTKNWYRRQENNGWRPITIKALPSAEDDPVTIDTAKKHASRSGSGGESGDGLRPGXXXXXXXFHYSKLVREECRAARMKRRKRRWLMSMYSAGLAETA 1626 PW S F RK ++ +R I+ PW P+AA +L+ + IQ+ VRG + + R T + ++R + A G G+ + +IQAW+RM R+R ++PLY +AALQ+QYAW+ + Q+ ++ SA NR AA IQT W+S + I+RYYR+++ FR GDP +LRAINP EA+L D + G VRFRLGG FPP+IYYK++T +PV D+GAF+P+ Y+ + P + G ++ IRVG SY+ R + T+ WYRR ENNGWRP+T K L A DP+ T + A FHYSK+VR++ R + +KR W+ +Y+ GL TA Sbjct: 48 PWESTFMRKSKAEKREIILRPWEYPMAAQNLSVILIQKRVRGMLCRAAKGRQQVTKKV---------------------------------KAAHVRSPMQQFVATGRSFSDER-----GFYTFVATKIQAWFRMQRLRWRGTLERYPLYHIAALQLQYAWKAHCQHKLHQQPAHGPNSAMT-----------------PVNR--------------AASCIQTAWKSYTHRRIFRYYRDLLTFRSTGDPARMLRAINPSEASLLDASMGAQVRFRLGGLAFPPTIYYKIFTRKPVCDLGAFSPKDYTVARQSAPVSHSHVKRRPG--QSVHTTYIRVGNSYYRA---RQQAEDTRLWYRRLENNGWRPVTAKVLAEANADPIAQATGSRRAVNG--------------------FHYSKVVRQQDRERARRHKKRLWMQKLYTQGLLTTA 404
BLAST of mRNA_E-siliculosus-1a_F_contig1054.393.1 vs. uniprot
Match: D0P3I4_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P3I4_PHYIT) HSP 1 Score: 221 bits (563), Expect = 1.630e-61 Identity = 152/461 (32.97%), Postives = 212/461 (45.99%), Query Frame = 1 Query: 262 QRGRPWRSVFARKPRSSRRAIVAAPWTSPVAAHHLAAVQIQRHVRGFIANRSVARHGTTNRAGGRNSRAKTEADTATRRRGSGRRRSRAGGSTRQLDKYLRHVAEDEAAHGSGXXXXXXEAGGGYSEWCGRRI------QAWWRMVDARFRFRYLKFPLYGLAALQIQYAWRNYQQNTIYDMSTREIVSAECLSSLERGSSLLREDGECSANRQQSEGMLTASLESCAAKTIQTCWRSRVSKSIYRYYRNVIDFRLGGDPRLLLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKVYTHQPVADIGAFAPRAYSEDAKDTPADRWNHPPMTGYPENPKAGQIRVGASYFGTAVKRTGPQGTKNWYRRQENNGWRPITIKALPSAEDDPVTIDTAKKHASRSGSGGESGDGLRPGXXXXXXXFHYSKLVREECRAARMKRRKRRWLMSMYSAGLAETA 1626 +RG PW S F RK + +R I++ PW P+AA +L+ + IQ+ VRG + RQ R+ AA GG +S+ G RI QAW+RM R+R ++PLY +AALQIQYAW+ + Q+ +Y + + SA + R D CAA IQT W+ + I+RYYR+++ FR GDP +LRAINP EA+L D + G VRFRLGG FPP+IYYK+YT +PV D+G+F+P+ Y+ + P + G ++ IRVG SY+ R + T+ WYRR ENNGWR +T K L A DP+ TA + FHYSKLVR++ R + +KR W+ +Y+ GL A Sbjct: 40 RRGAPWESTFLRKSKGEKREIISRPWEYPMAAQNLSVILIQKRVRGMLCR------------------------------------------GRQQVTMSRN-----AARARSPMQQFVAKGGSFSDERGFRIFVVTKLQAWFRMQRLRWRGTLERYPLYHIAALQIQYAWKTHCQHKLYQRQSGDPDSA-----------MTRVD--------------------CAALCIQTNWKIYTHRRIFRYYRDLLTFRSTGDPARMLRAINPSEASLLDASMGAQVRFRLGGLAFPPTIYYKIYTRKPVCDLGSFSPKNYTVARQSAPVSHSHVKCQPG--QSVHTTYIRVGNSYYRA---RQQSEDTRLWYRRLENNGWRSVTAKVLAEANADPIAQATATRQPING--------------------FHYSKLVRQQDRERVRRHKKRLWMQKLYAEGLLTAA 397
BLAST of mRNA_E-siliculosus-1a_F_contig1054.393.1 vs. uniprot
Match: A0A6A3NXA8_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NXA8_9STRA) HSP 1 Score: 220 bits (560), Expect = 1.780e-61 Identity = 145/446 (32.51%), Postives = 216/446 (48.43%), Query Frame = 1 Query: 295 RKPRSSRRAIVAAPWTSPVAAHHLAAVQIQRHVRGFIANRSVARHGTTNRAGGRNSRAKTEADTATRRRGSGRRRSRAGGSTRQLDKYLRHVAEDEAAHGSGXXXXXXEAGGGYSEWCGRRIQAWWRMVDARFRFRYLKFPLYGLAALQIQYAWRNYQQNTIYDMSTREIVSAECLSSLERGSSLLREDGECSANRQQSEGMLTASLE--SCAAKTIQTCWRSRVSKSIYRYYRNVIDFRLGGDPRLLLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKVYTHQPVADIGAFAPRAYSEDAKDTPADRWNHPPMTGYPENPKAGQIRVGASYFGTAVKRTGPQGTKNWYRRQENNGWRPITIKALPSAEDDPVTIDTAKKHASRSGSGGESGDGLRPGXXXXXXXFHYSKLVREECRAARMKRRKRRWLMSMYSAGLAETA 1626 RK R+ +R I+ PW P+AA +L+ + IQ+ VRG + R+++A A+ T++ +R + A G G+ + ++QAW+RM R+R +FPLY +AALQ+QYAW+ + Q+ +Y ++Q+ G +A++ +CAA IQ+ W+S + I+RYYR+++ FR GDP +LRAINP EA+L D + G VRFRLGG FPP+IYYK++T +PV D+GAF+P+ Y+ + P + T + IRVG SY+ R + T+ WYRR ENNGWRP+T K L A DP+ T +HA FHYSKLVR++ R + +KR W+ +Y+ GL A Sbjct: 2 RKSRAEKREIILRPWEYPMAAQNLSVILIQKRVRGMLCRMH------------RSAKAAPNGPAAS-----------VHDRTKKTKTRIRSPMQQFVASGGSFSDER-----GFRNFVATKLQAWFRMERQRWRGTLDRFPLYHIAALQLQYAWKAHYQHKLY--------------------------------QRQAHGARSAAMTPANCAALCIQSVWKSYTHRRIFRYYRDLLSFRSTGDPARMLRAINPSEASLLDASMGAQVRFRLGGLAFPPTIYYKIFTRKPVCDLGAFSPKDYTVARQAGPLSHSHEKRRTTF--------IRVGNSYYRA---RQHAEDTRLWYRRLENNGWRPVTAKVLAEANADPIAQATGGRHA--------------------VSGFHYSKLVRQQDRERARRHKKRLWMQKLYTQGLLTPA 356
BLAST of mRNA_E-siliculosus-1a_F_contig1054.393.1 vs. uniprot
Match: A0A662XTL0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XTL0_9STRA) HSP 1 Score: 215 bits (547), Expect = 1.890e-59 Identity = 151/432 (34.95%), Postives = 206/432 (47.69%), Query Frame = 1 Query: 334 PWTSPVAAHHLAAVQIQRHVRGFIANRSVARHGTTNRAGGRNSRAKTEADTATRRRGSGRRRSRAGGSTRQ-LDKYLRHVAEDEAAHGSGXXXXXXEAGGGYSEWCGRRIQAWWRMVDARFRFRYLKFPLYGLAALQIQYAWRNYQQNTIYDMSTREIVSAECLSSLERGSSLLREDGECSANRQQSEGMLTASLESCAAKTIQTCWRSRVSKSIYRYYRNVIDFRLGGDPRLLLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKVYTHQPVADIGAFAPRAYSEDAKDTPADRWNHPPMTGYPENPKAGQIRVGASYFGTAVKRTGPQGTKNWYRRQENNGWRPITIKALPSAEDDPVTIDTAKKHASRSGSGGESGDGLRPGXXXXXXXFHYSKLVREECRAARMKRRKRRWLMSMYSAGLAETA 1626 PW P+AA +LA + IQ+ VRG + A GT+ N R GG TR + +++ A G G+ + R+QAW+RM R+R +FPLY +AALQ+QY W+ + Q+ ++ TR SA LS AN AA +Q S + I+RYYR+++ FR GDP +LRAINPGEA L D + G VRFRLGG FPP+IYYK++T +PV D+GAF+P+ Y+ + P + G E+ A IRVG SY+ R Q T+ WYRR ENNGWRP+T K L A DP+ T + A G FHYSKLVR++ R + + +KR W+ +Y+ GL TA Sbjct: 20 PWEFPMAAQNLAVILIQKRVRGMLCRLRQA-SGTSKTVSTSN--------------------RRKGGRTRSPMQQFV--------ARGGSFSDER-----GFRAFAATRLQAWFRMQRQRWRATLARFPLYHIAALQLQYTWKAHYQHALFQRQTRGSGSAAPLSP---------------ANG--------------AALCLQXXXXSYTQRRIFRYYRDLLTFRSTGDPARMLRAINPGEAGLLDASMGAQVRFRLGGLVFPPTIYYKIFTRRPVCDLGAFSPKDYTLARQGAPVSHSHARRSRGQTES--ATFIRVGNSYYRA---RQQEQDTRLWYRRLENNGWRPVTAKVLAEANADPIAQATGGRRAVAPAGG-----------------FHYSKLVRQQDRESARRHKKRLWMQKLYTQGLLVTA 366
BLAST of mRNA_E-siliculosus-1a_F_contig1054.393.1 vs. uniprot
Match: A0A0N7L5N7_PLAHL (IQ motif, EF-hand binding site n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5N7_PLAHL) HSP 1 Score: 214 bits (544), Expect = 1.730e-58 Identity = 147/454 (32.38%), Postives = 216/454 (47.58%), Query Frame = 1 Query: 262 QRGRPWRSVFARKPRSSRRAIVAAPWTSPVAAHHLAAVQIQRHVRGFIANRSVARHGTTNRAGGRNSRAKTEADTATRRRGSGRRRSRAGGSTRQLDKYLRHVAEDEAAHGSGXXXXXXEAGGGYSEWCGRRIQAWWRMVDARFRFRYLKFPLYGLAALQIQYAWRNYQQNTIYDMSTREIVSAECLSSLERGSSLLREDGECSANRQQSEGMLTASLESCAAKTIQTCWRSRVSKSIYRYYRNVIDFRLGGDPRLLLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKVYTHQPVADIGAFAPRAYSEDAKDTPADRWNHPPMTGYPENPKAGQ---IRVGASYFGTAVKRTGPQGTKNWYRRQENNGWRPITIKALPSAEDDPVTIDTAKKHASRSGSGGESGDGLRPGXXXXXXXFHYSKLVREECRAARMKRRKRRWLMSMYSAGL 1614 +RG PW S F RK ++ + I+ PW P+AA +L+A+ IQ+ RG + + T +A +R GG+T D R + A+G G+ + +IQAW++M R+R ++PLY +AALQ+QYAW+ Y+Q + + R +SS+ R AA IQT W+S + I++YYR+++ FR GDP +LRAINP EA+L D + VRFRLGG TFPP++YYK++T +PV D+G F+P+ Y+ K +T + Q IRVG SY+ + + T+ WY R ENNGWRP+T K L A DP+T T ++ GG +HYSKLVR + R + +KR W+ +Y+ GL Sbjct: 40 RRGFPWESTFMRKSKAEKMEIIMKPWLYPMAAQNLSAILIQKRARGMLCRMHWSSGFLTFKAA---------------------QRLHEGGNT-MADTQFRSPIQQFVANGGNYFDES-----GFYTFVVTKIQAWFKMQRLRWRRVLDRYPLYHIAALQLQYAWKVYRQQKLNERQARSPTLWSAMSSVHR-----------------------------AALCIQTFWKSYSYRRIFQYYRDLLTFRGTGDPVQMLRAINPSEASLLDASMSAQVRFRLGGLTFPPTVYYKIFTRKPVCDLGVFSPKDYTISRKSAS--------VTHSQVKSRINQYLYIRVGNSYYRAQHQM---EDTRLWYSRLENNGWRPVTAKVLAEANADPITRTTGSRYT----IGGN---------------YHYSKLVRLQDRERTRRNKKRLWMQKLYAQGL 407
BLAST of mRNA_E-siliculosus-1a_F_contig1054.393.1 vs. uniprot
Match: A0A7S1UGA4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGA4_9STRA) HSP 1 Score: 213 bits (542), Expect = 5.010e-58 Identity = 176/456 (38.60%), Postives = 233/456 (51.10%), Query Frame = 1 Query: 280 RSVFARKPRSSRRAIVAAPWTSPVAAHHLAAVQIQRHVRGFIANRSVARHGTTNRAGGRNSRAKTEADTATRRRGSGRRRSRAGGSTRQLDKYLRHVAEDEAAHGSGXXXXXXEAGGGYSEWCGRRIQAWWRMVDAR-FRF---RYLK---FPLYGLAALQIQYAWRNYQQNTIYDMSTREIVSAECLSSLERGSSLLRED-GECSANRQQSEGMLTASLESCAAKTIQTCWRSRVSKSIYRYYRNVIDFRLGGDPRLLLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKVYTHQPVADIGAFAPRAYSE--DAKDTPADRWNHPPMTGYPENPKAGQIRVGASYFGTAVKRTGPQGTKNWYRRQENNGWRPITIKALPSAEDDPVTIDTAKKHASRSGSGGESGDGLRPGXXXXXXXFHYSKLVREECRAARMKRRKRRWLMSMYSAGLA 1617 R FA + R SRRA++ PW P+A+ HLA V IQ VRGF+A ++ R + R+ +S +K E+ G G G + L +YL + E G+ +C RIQA +R R RF R LK F +Y +AAL+IQ AWR + +N + S +SA+ L + E+ E A ++ S E AA IQ WR + IYRYYR++I F GDP+ LLRAINP EA LFD AAGV VRFRLGGY+FPP+IYYK++TH+PVAD+GAFAPR Y+ D D +A IRVG + + A R G + WYRR E NGWRP+T++ + DPV +T HA RS +P FH+S+L R+E + K +KRRWL MY GLA Sbjct: 6 RRGFAARSRVSRRAMLQRPWVYPIASFHLATVMIQAAVRGFVARATLDRR-LSRRSRSISSISKPESGP-----GDG------GEDSTLLARYLSLGSPVEGEKV------------GFVAFCATRIQASYRGHSLRRIRFEGQRILKLQGFSIYHIAALEIQVAWREHYKNRLMAGS----LSAKDLKARAXXXXXXXEEKAELDAIEER------RSREDEAAAKIQHLWRGMAATRIYRYYRDLIRFFFAGDPKELLRAINPAEAQLFDAAAGVFVRFRLGGYSFPPTIYYKIFTHRPVADVGAFAPRDYTRVNDVDDM---------------GDEACAIRVGETLY-EAKLRGGDADGQGWYRRVECNGWRPVTLQVIQDKGLDPVYKET---HA-RS----------KP--------FHWSRLQRQEDVLRKRKAKKRRWLQKMYMDGLA 389
BLAST of mRNA_E-siliculosus-1a_F_contig1054.393.1 vs. uniprot
Match: W2QR40_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QR40_PHYPN) HSP 1 Score: 211 bits (537), Expect = 1.070e-57 Identity = 149/465 (32.04%), Postives = 210/465 (45.16%), Query Frame = 1 Query: 262 QRGRPWRSVFARKPRSSRRA----------IVAAPWTSPVAAHHLAAVQIQRHVRGFIANRSVARHGTTNRAGGRNSRAKTEADTATRRRGSGRRRSRAGGSTRQLDKYLRHVAEDEAAHGSGXXXXXXEAGGGYSEWCGRRIQAWWRMVDARFRFRYLKFPLYGLAALQIQYAWRNYQQNTIYDMSTREIVSAECLSSLERGSSLLREDGECSANRQQSEGMLTASLESCAAKTIQTCWRSRVSKSIYRYYRNVIDFRLGGDPRLLLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKVYTHQPVADIGAFAPRAYSEDAKDTPADRWNHPPMTGYPENPKAGQIRVGASYFGTAVKRTGPQGTKNWYRRQENNGWRPITIKALPSAEDDPVTIDTAKKHASRSGSGGESGDGLRPGXXXXXXXFHYSKLVREECRAARMKRRKRRWLMSMYSAGLAETA 1626 +RG PW S F RK ++ +RA I+ PW P+AA +L+ + IQ+ VRG + + R + + GR RS + KY DE G+ + +IQAW+RM R+R ++PLY +AALQ+QYAW+ Y + +Y R I A ++ ++R AA I+RYYR+++ FR GDP +LRAINP EA+L D + G HVRFRLGG FPP+IYYK++T +PV D+GAF+P+ Y+ + P + T Y IRVG SY+ R + T+ WY R ENNGWRP+T K L A DP+ T + A FHYSKLVR++ R + +KR W+ +Y+ GL A Sbjct: 40 RRGSPWESTFMRKSKAEKRASSQEIGQISDIILRPWEYPMAAQNLSVILIQKRVRGMLCRSANGRQQVSKKMN------------------IGRARSPMQQFVTRGGKY-----SDER---------------GFRTFVATKIQAWFRMQRLRWRGTLERYPLYHIAALQLQYAWKTYSHHKMYQRQARSINPA--MTPIDR-----------------------------AAXXXXXXXXXXXXXXIFRYYRDLLTFRSTGDPARMLRAINPSEASLLDASMGAHVRFRLGGLAFPPTIYYKIFTRKPVCDLGAFSPKNYTVTRQSGPVSHSHAKRHTTY--------IRVGNSYYRA---RQQAENTRLWYCRLENNGWRPVTAKVLAEANADPIAQATGSRRA--------------------VDEFHYSKLVRQQDRERARRHKKRLWMQKLYTQGLLTAA 404
BLAST of mRNA_E-siliculosus-1a_F_contig1054.393.1 vs. uniprot
Match: W4GSH4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GSH4_9STRA) HSP 1 Score: 208 bits (530), Expect = 8.240e-57 Identity = 144/451 (31.93%), Postives = 211/451 (46.78%), Query Frame = 1 Query: 268 GRPWRSVFARKPRSSRRAIVAAPWTSPVAAHHLAAVQIQRHVRGFIANRSVARHGTTNRAGGRNSRAKTEADTATRRRGSGRRRSRAGGSTRQLDKYLRHVAEDEAAHGSGXXXXXXEAGGGYSEWCGRRIQAWWRMVDARFRFRYLKFPLYGLAALQIQYAWRNYQQNTIY--DMSTREIVSAECLSSLERGSSLLREDGECSANRQQSEGMLTASLESCAAKTIQTCWRSRVSKSIYRYYRNVIDFRLGGDPRLLLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKVYTHQPVADIGAFAPRAYSEDAKDTPADRWNHPPMTGYPENPKAGQ---IRVGASYFGTAVKRTGPQGTKNWYRRQENNGWRPITIKAL-PSAEDDPVTIDTAKKHASRSGSGGESGDGLRPGXXXXXXXFHYSKLVREECRAARMKRRKRRWLMSMY 1602 GRPW S+F RK R RR +V PW P+ A HLAA+ IQ+ VRG +A S+ G RSR +++ L H A H + +C R+QAW++M + R+R+ + P+Y +AA+QIQY WR + Q T+ D++ RE A IQ WR ++ IYRYYR++I+FR GDP ++LRAINP EA+L D + VRFRLGG FPP+IYYK++T V D+ AF+P+ Y+ + P + + P P G IRVG +Y+G T T WYRR +NNGWRP+T K + P+ + DP+T+ TA + + +H+ ++VR++ + K +KR+W+ +Y Sbjct: 48 GRPWESLFMRKSRRERRNLVKRPWDYPMGAQHLAAIVIQKRVRGLLARLSLQ----------------------------GLLRSR----KKKMKMGLMH--RFIALHNGNFEDKEH-----FRHFCASRLQAWYKMKNVRWRYHLDRHPMYHIAAMQIQYKWRMFFQRTLVHGDVTPRER----------------------------------------AVIRIQAAWRCYTNRRIYRYYRDLINFRNSGDPMVMLRAINPSEASLLDASTNAQVRFRLGGSAFPPTIYYKIFTRGAVCDMNAFSPKDYTTARQIGPRN------VNIRPSRPGVGVTKIIRVGNAYYGATQCGTN---TGGWYRRWDNNGWRPVTSKVIAPTTDIDPITVATANRPRA----------------------YHHLRVVRQQQVIRQRKEKKRQWMKQLY 388 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1054.393.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1054.393.1 >prot_E-siliculosus-1a_F_contig1054.393.1 ID=prot_E-siliculosus-1a_F_contig1054.393.1|Name=mRNA_E-siliculosus-1a_F_contig1054.393.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=642bp MLSPEEVRVRESLFSSVSSDQAWATCRSVSDGDGVGRDSYGCVPTAVEVPback to top mRNA from alignment at E-siliculosus-1a_F_contig1054:19838..26564- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1054.393.1 ID=mRNA_E-siliculosus-1a_F_contig1054.393.1|Name=mRNA_E-siliculosus-1a_F_contig1054.393.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6727bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1054:19838..26564- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1054:19838..26564- >mRNA_E-siliculosus-1a_F_contig1054.393.1 ID=mRNA_E-siliculosus-1a_F_contig1054.393.1|Name=mRNA_E-siliculosus-1a_F_contig1054.393.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3852bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1054:19838..26564- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |