mRNA_E-siliculosus-1a_F_contig1052.378.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1052.378.1 vs. uniprot
Match: D8LG42_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG42_ECTSI) HSP 1 Score: 309 bits (792), Expect = 9.100e-104 Identity = 150/156 (96.15%), Postives = 156/156 (100.00%), Query Frame = 1 Query: 175 MFELQQSPTRLDEATNSVVAGTDRVKLFKGAEQALLELSTQERFSDTQVAVASSTSRKESAMACLRLFQVSPGVTANDVLSYREIYPDNKGTHFKSLQKASGIAYKDMLFFDDCNWGDNCRDVEWACPGVVTTKTPNGLTPEKWAEGLAKFAETKR 642
MFELQQSPTRLDEATNSVVAGTDRV+LFKGAEQALLELSTQ+RFSDT+VAVASSTSRK+SAMACLRLFQVSPGVTANDVLSYREIYPDNKGTHFKSL+KASGIAY+DMLFFDDCNWGDNCRDVEWACPGVVTTKTPNGLTPEKWAEGLAKFAETKR
Sbjct: 1 MFELQQSPTRLDEATNSVVAGTDRVRLFKGAEQALLELSTQDRFSDTRVAVASSTSRKKSAMACLRLFQVSPGVTANDVLSYREIYPDNKGTHFKSLRKASGIAYEDMLFFDDCNWGDNCRDVEWACPGVVTTKTPNGLTPEKWAEGLAKFAETKR 156
BLAST of mRNA_E-siliculosus-1a_F_contig1052.378.1 vs. uniprot
Match: A0A7S0TRT1_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TRT1_HEMAN) HSP 1 Score: 199 bits (507), Expect = 6.460e-60 Identity = 91/173 (52.60%), Postives = 126/173 (72.83%), Query Frame = 1 Query: 121 AVPKLVVFDCDMCLWEPEMFELQQSPTRLDEATNSVVAGTDRVKLFKGAEQALLELSTQERFSDTQVAVASSTSRKESAMACLRLFQVSPGVTANDVLSYREIYPDNKGTHFKSLQKASGIAYKDMLFFDDCNWGDNCRDVEWACPGVVTTKTPNGLTPEKWAEGLAKFAETK 639
AVP LVV D DMC W+PEMF+L +P++ + + NSV AG D++K+F GA A+ ++ + F T++AVASST+ + A AC+R+F++ GV +DV+ Y EI+ +K HFK+L+K+SGI Y+DMLFFDDC +G+NC DVE CPGVVT TPNG+ +W EGLAKFA+ K
Sbjct: 25 AVPLLVVLDLDMCCWDPEMFQLSGAPSKWNPSDNSVTAGRDKIKMFPGAIAAIRDIHSNPAFKGTKLAVASSTTEPDYARACMRMFEIDKGVKMHDVVKYSEIFCASKTNHFKNLKKSSGIEYQDMLFFDDCTYGNNCADVERGCPGVVTLATPNGMQEREWREGLAKFAKAK 197
BLAST of mRNA_E-siliculosus-1a_F_contig1052.378.1 vs. uniprot
Match: A0A836C7Z3_9STRA (Magnesium-dependent phosphatase-1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Z3_9STRA) HSP 1 Score: 186 bits (472), Expect = 3.120e-55 Identity = 90/160 (56.25%), Postives = 115/160 (71.88%), Query Frame = 1 Query: 175 MFELQQSPTRLDEATNSVVAGTDRVKLFKGAEQALLELSTQERFSDTQVAVASSTSRKESAMACLRLFQVSPGVTANDVLSYREIYPDNKGTHFKSLQKASGIAYKDMLFFDDCNWGDNCRDVEWACPGVVTTKTPNGLTPEKWAEGLAKFAETKR*RRA 654
MFEL +P D TN+V AG D VKLF GA AL EL ++ERF DT VA ASSTS ++ AM CL++F+V PGV DV++ +EIYP +K HF++LQ A+G+ Y +MLF+DDCNWG+NC +VE CPGVVT KTP+GLT +KW + L K+A T R A
Sbjct: 1 MFELGGAPKTWDSKTNTVKAGRDTVKLFPGAVVALRELRSEERFKDTLVAAASSTSHRDYAMRCLQMFEVEPGVKMRDVITLKEIYPSSKVKHFRALQAATGLRYDEMLFWDDCNWGNNCAEVERGCPGVVTMKTPDGLTVDKWRQALDKYARTAAARAA 160
BLAST of mRNA_E-siliculosus-1a_F_contig1052.378.1 vs. uniprot
Match: A0A8J5XGL3_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XGL3_DIALT) HSP 1 Score: 147 bits (370), Expect = 2.200e-39 Identity = 80/175 (45.71%), Postives = 106/175 (60.57%), Query Frame = 1 Query: 124 VPKLVVFDCDMCLWEPEMFELQQSPTRLDEATNSVVAGTDRVKLFKGAEQALLEL--STQERFSDTQVAVASSTSRKESAMACLRLFQVSP--GVTANDVLS-YREIYPDNKGT-HFKSLQKASGIAYKDMLFFDDCNWGDNCRDVEWACPGVVTTKTPNGLTPEKWAEGLAKFA 630
VPKL++FD D CLW PEMFEL PT D A V AG+D V+LF GA + + T R++ +VAVASST+ A ACL V G T DV+ YREI+P +KG H SL + + + + +M+F+DDC +GDNC DV C G+V +TP GLT ++ +GL FA
Sbjct: 25 VPKLLIFDLDACLWTPEMFELDGKPTVFDAARGGVRAGSDVVRLFPGALAVVRRIWADTDGRYAGCRVAVASSTTHPAYAHACLDALVVDADSGTTLGDVVGLYREIHPGSKGDLHIPSLSEQTSVPFSEMVFWDDCTYGDNCADVAGKCAGIVCVRTPRGLTEREFEQGLDAFA 199
BLAST of mRNA_E-siliculosus-1a_F_contig1052.378.1 vs. uniprot
Match: A0A7S3V195_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V195_9STRA) HSP 1 Score: 140 bits (354), Expect = 4.920e-37 Identity = 85/212 (40.09%), Postives = 117/212 (55.19%), Query Frame = 1 Query: 97 MAEKAEKEAVPKLVVFDCDMCLWEPEMFELQQSPTRLDEATNSVVAGTDR------------VKLFKGAEQALLELSTQERFSDTQVAVASSTSRK---ESAMACLRLFQVSPGVTANDVLSYREIYPD----------------NKGTHFKSLQKASGIAYKDMLFFDDCNWGDNCRDVEWACPGVVTTKTPNGLTPEKWAEGLAKFAETK 639
MA++ E P L+V DCDMCLWEPEM+EL + P +EA + G + V+LF GA + L + +F T++AVASS AM + + +V PG+T ++L +P NK THF+ L+K +GI + +MLF+DDCNWGDNC VE CPGVVT KTPNG+T +++ GL KFA+ K
Sbjct: 1 MAQQQE----PSLLVLDCDMCLWEPEMYELSREP---EEAVYGDLGGRGKGVVGAKASEHEVVRLFPGALKCL-QAFADGKFKSTRLAVASSADTPLAVRCAMKSMSMLEVLPGLTIRELLGRG--FPQGFSGNIQVGRSGKLSSNKTTHFRELKKETGILFDEMLFYDDCNWGDNCLVVERGCPGVVTQKTPNGMTEKEFRLGLEKFAKAK 202
BLAST of mRNA_E-siliculosus-1a_F_contig1052.378.1 vs. uniprot
Match: A0A2P6VC56_9CHLO (Magnesium-dependent phosphatase-1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VC56_9CHLO) HSP 1 Score: 128 bits (321), Expect = 1.690e-32 Identity = 72/178 (40.45%), Postives = 102/178 (57.30%), Query Frame = 1 Query: 121 AVPKLVVFDCDMCLWEPEMFELQQ-SPTRLDEATNSVVAGTDR----VKLFKGAEQALLELSTQERFSDTQVAVASSTSRKESAMACLRLFQVSPGVTANDVLSYREIYPDNKGTHFKSLQKASGIAYKDMLFFDDCNWGDNCRDVEWACPGVVTTKTPNGLTPEKWAEGLAKFAETK 639
A+PKL+ FD D LWEPEM++L +P R DR V L A + L EL+T +++D Q+A S T + A CL+L ++ G++ +D+ + EIYP +K THF+ + + +GIAYKDMLF+DD W N D A GVV P GLT + W +GLA+FA +
Sbjct: 2 ALPKLIAFDLDATLWEPEMYQLSGGAPFRPGRCDRGRPVAVDRRGEEVGLIGDAWRILHELATDGKWADVQIAYVSRTDEPQWAAECLQLLKLDSGLSLHDLAHHHEIYPGSKRTHFRRIHERTGIAYKDMLFWDDMQW--NTEDC--AALGVVAIYAPRGLTADAWHKGLAEFARRR 175
BLAST of mRNA_E-siliculosus-1a_F_contig1052.378.1 vs. uniprot
Match: A0A6S9KH66_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KH66_HETAK) HSP 1 Score: 124 bits (311), Expect = 4.640e-31 Identity = 68/171 (39.77%), Postives = 94/171 (54.97%), Query Frame = 1 Query: 121 AVPKLVVFDCDMCLWEPEMFELQQSPTRLDEATNSVVAGTDRVKLFKGAEQALLELSTQERFSDTQVAVASSTSRKESAMACLRLFQVSPGVTANDVLSYREIYPDNKGTHFKSLQKASGIAYKDMLFFDDCNWGDNCRDVEWACPGVVTTKTPNGLTPEKWAEGLAKFAE 633
AVPKL+VFD D +W+PEM++L +P T+ V LF L + E F++T++ AS T E A C+ L V G+ + ++ EIYP K HF+ LQK S + Y+DMLFFDDC+W NCRDV + GV PNGL+ ++ E L FA+
Sbjct: 2 AVPKLIVFDLDFTMWDPEMYQLDGAPFSYRNGKVYDRRNTE-VDLFPDVRNILQRIHFSEEFAETKIGSASRTEYPEWAYECMSLIDVCDGMKMREFFTFNEIYPGTKTKHFRKLQKDSQVDYEDMLFFDDCSW--NCRDV--SALGVTAFNCPNGLSEREFNEALDIFAQ 167
BLAST of mRNA_E-siliculosus-1a_F_contig1052.378.1 vs. uniprot
Match: A0A7S2JQW7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JQW7_9STRA) HSP 1 Score: 125 bits (315), Expect = 5.740e-31 Identity = 71/172 (41.28%), Postives = 96/172 (55.81%), Query Frame = 1 Query: 124 VPKLVVFDCDMCLWEPEMFELQQ-SPT-----RLDEATNSVVAGTD-----RVKLFKGAEQALLELSTQERFSDTQVAVASSTSRKESAMACLRLFQVSPGVTANDVLSYREI-----YPDNKGTHFKSLQKASGIAYKDMLFFDDCNWGDNCRDVEWACPGVVTTKTPNGL 591
+P ++VFD D CLW PEM+ L+ PT + + +V G VKLF GA AL+EL+T ++ D +A ASS+ + ACL +V PG T + Y +I K THFK L + SG+AY +MLFFDDCNWGD+ D+E C GVV +TP G+
Sbjct: 58 LPTMIVFDLDDCLWSPEMYTLRYPGPTIPVKGKAEGCDEDIVIGMQCPNGPTVKLFNGARSALVELATDPKYKDVIIAAASSSEEPTFSKACLDNIEVLPGKTMRSMFQYSQIGRTGKLSSRKTTHFKELHQDSGVAYNEMLFFDDCNWGDHVGDLE-NCFGVVGQRTPRGM 228
BLAST of mRNA_E-siliculosus-1a_F_contig1052.378.1 vs. uniprot
Match: Q23FY3_TETTS (Acid phosphatase n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q23FY3_TETTS) HSP 1 Score: 124 bits (312), Expect = 9.630e-31 Identity = 71/199 (35.68%), Postives = 103/199 (51.76%), Query Frame = 1 Query: 115 KEAVPKLVVFDCDMCLWEPEMFELQQSPTR--------LDEATNSVVAGTDRVKLFKGAEQALLELSTQERFSDTQVAVASSTSRK---ESAMACLRLFQVSPGVTANDVLSYREIYPDN-----------------KGTHFKSLQKASGIAYKDMLFFDDCNWGDNCRDVEWACPGVVTTKTPNGLTPEKWAEGLAKF 627
K +PKL+VFD DMCLW PE + L + P++ + E V G+ +KLF L + ++ + ++A+ASS + A L + ++ PGVT V+ ++ + DN +HF L K +GIAY DM+FFDDCNW DNC+ VE CPGVVT +TPNGL +W + L +
Sbjct: 6 KRILPKLIVFDLDMCLWSPETYVLDEQPSKKIIGKLGNIGEGVIGVQCGSQTLKLFPDVITILQDFYNN-KYPEVKLAIASSADTPFAVQIAKNALNMLEILPGVTIRQVI--QKGWQDNFDGHIQIGRTPPLSSRKSKSHFPLLLKNTGIAYTDMIFFDDCNWDDNCKHVELDCPGVVTQRTPNGLQLHEWNKALDNY 201
BLAST of mRNA_E-siliculosus-1a_F_contig1052.378.1 vs. uniprot
Match: A0A1E7FY89_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FY89_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.340e-30 Identity = 73/191 (38.22%), Postives = 106/191 (55.50%), Query Frame = 1 Query: 124 VPKLVVFDCDMCLWEPEMFELQQSPTRLDEATNSVVAGTD-------------RVKLFKGAEQALLELSTQERFSDTQVAVASSTSRKESAMACLRLFQVSPGVTANDVLSYREI------YPDNKGTHFKSLQKASGIAYKDMLFFDDCNWGDNCRDVEWACPGVVTTKTPNGLTPEKWAEGLAKFAETK 639
+P ++VFD D CLW PEM EL P + N + G V L+ GA + L EL+T + D Q+A ASS+ + ACL ++ PG+ D+++Y +I PD K THF+ L + SGI Y +MLFFDDCNWGD+C V A GV++ +TP+GL +++ GL+K+ + K
Sbjct: 9 LPSMIVFDLDDCLWTPEMHELPGLP-EIPIHGNLIPKGVVGLQVPRYGNRDNCTVTLYDGARKILYELATNPIYKDVQLATASSSLEPSYSYACLDGIEILPGLVIGDMMNYNQIGRTGNLSPD-KITHFQQLHEESGIPYNEMLFFDDCNWGDHCERVTKAF-GVISQRTPHGLQWKEFETGLSKYQQQK 196 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1052.378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1052.378.1 >prot_E-siliculosus-1a_F_contig1052.378.1 ID=prot_E-siliculosus-1a_F_contig1052.378.1|Name=mRNA_E-siliculosus-1a_F_contig1052.378.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=215bp MQRWTHFKRGPLSLSHRYRHYCRNPAILERGEMAEKAEKEAVPKLVVFDCback to top mRNA from alignment at E-siliculosus-1a_F_contig1052:25613..29534- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1052.378.1 ID=mRNA_E-siliculosus-1a_F_contig1052.378.1|Name=mRNA_E-siliculosus-1a_F_contig1052.378.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3922bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1052:25613..29534- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1052:25613..29534- >mRNA_E-siliculosus-1a_F_contig1052.378.1 ID=mRNA_E-siliculosus-1a_F_contig1052.378.1|Name=mRNA_E-siliculosus-1a_F_contig1052.378.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1290bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1052:25613..29534- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |