mRNA_E-siliculosus-1a_F_contig1051.373.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1051.373.1 vs. uniprot
Match: D8LAX2_ECTSI (Peptide-methionine (R)-S-oxide reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAX2_ECTSI) HSP 1 Score: 327 bits (837), Expect = 8.530e-109 Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 1 Query: 190 MPDKYPAPDSFEVTKTDAEWAAELTPAEYSVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLDEDKVV 651
MPDKYPAPDSFEV KTDAEWAAELTPAEY+VIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGL+EDKVV
Sbjct: 1 MPDKYPAPDSFEVAKTDAEWAAELTPAEYNVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEEDKVV 154
BLAST of mRNA_E-siliculosus-1a_F_contig1051.373.1 vs. uniprot
Match: A0A0G4FGB5_9ALVE (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FGB5_9ALVE) HSP 1 Score: 231 bits (589), Expect = 1.580e-71 Identity = 106/145 (73.10%), Postives = 122/145 (84.14%), Query Frame = 1 Query: 217 SFEVTKTDAEWAAELTPAEYSVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLDEDKVV 651
+FEV K++AEW +LT AEY VIRNKGTER TGEYDKFYP+ +G+F CKAC +PLYSA++KF SGCGWPAFDKCFKG+VVT D + GM R+EI+C KCGGHLGHVFEGERMTSTNERHCVNSVSVKF P+P GL+E KVV
Sbjct: 2 NFEVKKSEAEWKEKLTAAEYQVIRNKGTERPGTGEYDKFYPK--QGYFKCKACDHPLYSAKAKFDSGCGWPAFDKCFKGSVVTERDASMGMVRIEIMCGKCGGHLGHVFEGERMTSTNERHCVNSVSVKFVDEPVPAGLEEAKVV 144
BLAST of mRNA_E-siliculosus-1a_F_contig1051.373.1 vs. uniprot
Match: A0A835YX10_9STRA (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX10_9STRA) HSP 1 Score: 226 bits (577), Expect = 1.300e-69 Identity = 102/151 (67.55%), Postives = 121/151 (80.13%), Query Frame = 1 Query: 199 KYPAPDSFEVTKTDAEWAAELTPAEYSVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLDEDKVV 651
K+PAP + V K+ EW ++LTP EY V+ NK TERA +GEYDKFYP+ EG F CKAC NPLYSAE+KF SGCGWPAFDKC+ G+VVT DN++G +RVEI+CAKCGGHLGHVFEGERMT TNERHCVNS SV F KG P+ ++E KV+
Sbjct: 3 KFPAPSQYPVAKSAEEWKSKLTPKEYGVLFNKDTERAGSGEYDKFYPKADEGHFACKACNNPLYSAEAKFNSGCGWPAFDKCYHGSVVTEVDNSWG-RRVEILCAKCGGHLGHVFEGERMTPTNERHCVNSASVTFIKGEAPKDVEESKVL 152
BLAST of mRNA_E-siliculosus-1a_F_contig1051.373.1 vs. uniprot
Match: F2URT4_SALR5 (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2URT4_SALR5) HSP 1 Score: 224 bits (572), Expect = 7.820e-69 Identity = 99/142 (69.72%), Postives = 115/142 (80.99%), Query Frame = 1 Query: 226 VTKTDAEWAAELTPAEYSVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLDEDKVV 651
V KTD EW + L+ EY ++R KGTERA +GEYDKFYP+K EG F C+ C NPLYSA +KF SGCGWPAFDKC+KGAV T+ DN++GM+RVEIVC CGGHLGHVFEGERMT TNERHCVNSVS++F KG P G DE+KV
Sbjct: 11 VKKTDQEWKSLLSREEYRILREKGTERAGSGEYDKFYPKKGEGHFACRGCGNPLYSAAAKFNSGCGWPAFDKCYKGAVTTHVDNSFGMRRVEIVCGACGGHLGHVFEGERMTDTNERHCVNSVSIRFVKGVEPSGADEEKVT 152
BLAST of mRNA_E-siliculosus-1a_F_contig1051.373.1 vs. uniprot
Match: A0A2R5GP06_9STRA (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GP06_9STRA) HSP 1 Score: 223 bits (567), Expect = 8.240e-68 Identity = 97/140 (69.29%), Postives = 113/140 (80.71%), Query Frame = 1 Query: 220 FEVTKTDAEWAAELTPAEYSVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLDE 639
FEV K++ EW AEL P EY V+R KGTERA TGEYDKFYP EG+F C+ACKNPLY+A +KF SGCGWPAFDKC K ++V D ++GM+RVEI+CAKCGGHLGHVF GE +T TNERHCVNSVSVKF KGP+P +E
Sbjct: 10 FEVRKSEEEWRAELRPQEYHVLREKGTERAYTGEYDKFYPAADEGYFACRACKNPLYTAAAKFDSGCGWPAFDKCIKDSMVVEVDTSFGMKRVEIMCAKCGGHLGHVFHGEGLTPTNERHCVNSVSVKFMKGPVPSSSEE 149
BLAST of mRNA_E-siliculosus-1a_F_contig1051.373.1 vs. uniprot
Match: A0A7S2RXD0_9STRA (Peptide-methionine (R)-S-oxide reductase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RXD0_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.840e-64 Identity = 95/149 (63.76%), Postives = 117/149 (78.52%), Query Frame = 1 Query: 214 DSFEVTKTDAEWAAELTPAEYSVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLDEDKVV*SK 660
D F V KT+AEW +L+ EY+VIR KGTER TGEYD+ +P+ +G+F C+ACKNPLY+A+SKFK+GCGWPAF+ C K ++VTN DN GMQRVEIVC CGGHLGHVF GER T TNERHCVNS+SVK+ K P+P G E +V+ +K
Sbjct: 6 DKFGVDKTEAEWKKQLSKEEYAVIRQKGTERPFTGEYDQMFPD--DGYFACRACKNPLYTAKSKFKAGCGWPAFEACIKDSIVTNVDNTNGMQRVEIVCGDCGGHLGHVFHGERATETNERHCVNSISVKYIKEPLPAGKQEVEVLAAK 152
BLAST of mRNA_E-siliculosus-1a_F_contig1051.373.1 vs. uniprot
Match: A0A0L0FJ82_9EUKA (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FJ82_9EUKA) HSP 1 Score: 209 bits (533), Expect = 3.130e-62 Identity = 91/145 (62.76%), Postives = 112/145 (77.24%), Query Frame = 1 Query: 217 SFEVTKTDAEWAAELTPAEYSVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLDEDKVV 651
SF ++KTDAEW + L+ EY VIRNKGTE TGEY+K YP+ EG F C+ACKNP+YSA +KF SGCGWPAFDKC++G++ T D G++R+EI+C++CGGHLGHVFEGE+ T TNERHCVNSVS+KF KG E E KV
Sbjct: 64 SFPISKTDAEWKSSLSAQEYDVIRNKGTEAPGTGEYNKLYPKADEGHFACRACKNPIYSATAKFDSGCGWPAFDKCYEGSITTEIDQTMGLKRIEIMCSQCGGHLGHVFEGEKFTDTNERHCVNSVSIKFVKGKPAEEKAEVKVA 208
BLAST of mRNA_E-siliculosus-1a_F_contig1051.373.1 vs. uniprot
Match: A0A0M0J6J4_9EUKA (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J6J4_9EUKA) HSP 1 Score: 208 bits (529), Expect = 4.380e-62 Identity = 95/145 (65.52%), Postives = 113/145 (77.93%), Query Frame = 1 Query: 217 SFEVTKTDAEWAAELTPAEYSVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLDEDKVV 651
+++VTK+DAEW EL+ E+ ++R KGTER TG+YDKFYP+ EG FVC C PLYSA +KF SGCGWPAFDK +GAVVT TD + GM RVEI+C CGGHLGHVFEGERMT TNERHCVNS+SVK+ P+PEG E KV+
Sbjct: 13 TYKVTKSDAEWQKELSREEFYILREKGTERPRTGQYDKFYPK--EGHFVCAGCGTPLYSAAAKFDSGCGWPAFDKIVEGAVVTQTDRSMGMVRVEIMCGNCGGHLGHVFEGERMTPTNERHCVNSISVKYVDEPLPEGKREAKVL 155
BLAST of mRNA_E-siliculosus-1a_F_contig1051.373.1 vs. uniprot
Match: A0A0G4EFY5_VITBC (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFY5_VITBC) HSP 1 Score: 206 bits (525), Expect = 9.630e-62 Identity = 93/144 (64.58%), Postives = 110/144 (76.39%), Query Frame = 1 Query: 220 FEVTKTDAEWAAELTPAEYSVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLDEDKVV 651
FE+ K EW ELTP +Y +IR KGTER TGEY+KFYP+ EG+F C AC NPLYSA++KF SGCGWPAFDKC+K +V T TD+++GM R+EI+CA CGGHLGHVF GER T TNERHCVNSVSVK+ KG L+E K
Sbjct: 17 FEINKPPEEWKKELTPEQYHIIREKGTERPGTGEYNKFYPD--EGYFACAACGNPLYSAKAKFDSGCGWPAFDKCYKESVYTETDSSFGMIRIEIMCANCGGHLGHVFTGERFTDTNERHCVNSVSVKYVKGAPSPPLEEAKCT 158
BLAST of mRNA_E-siliculosus-1a_F_contig1051.373.1 vs. uniprot
Match: A0A6T7Y0U2_9CHLO (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A6T7Y0U2_9CHLO) HSP 1 Score: 208 bits (530), Expect = 1.940e-61 Identity = 96/142 (67.61%), Postives = 110/142 (77.46%), Query Frame = 1 Query: 226 VTKTDAEWAAELTPAEYSVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLDEDKVV 651
V K+++EW +EL+ EY V+R KGTER TGEYDKFYP G+F C C NPLYSAESKF SGCGWPAFDKC+ G+V T D+ GM+R+EI+CAKC GHLGHVFEGERMT TNERHCVNSVS KF +G P LDEDKV
Sbjct: 57 VEKSESEWKSELSDMEYYVLRQKGTERPRTGEYDKFYPT--TGYFKCAGCGNPLYSAESKFNSGCGWPAFDKCYVGSVKTEIDSTMGMRRIEIMCAKCDGHLGHVFEGERMTPTNERHCVNSVSTKFVEGEPPVPLDEDKVA 196 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1051.373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1051.373.1 >prot_E-siliculosus-1a_F_contig1051.373.1 ID=prot_E-siliculosus-1a_F_contig1051.373.1|Name=mRNA_E-siliculosus-1a_F_contig1051.373.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=155bp MPDKYPAPDSFEVTKTDAEWAAELTPAEYSVIRNKGTERATTGEYDKFYPback to top mRNA from alignment at E-siliculosus-1a_F_contig1051:32823..36385+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1051.373.1 ID=mRNA_E-siliculosus-1a_F_contig1051.373.1|Name=mRNA_E-siliculosus-1a_F_contig1051.373.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3563bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1051:32823..36385+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1051:32823..36385+ >mRNA_E-siliculosus-1a_F_contig1051.373.1 ID=mRNA_E-siliculosus-1a_F_contig1051.373.1|Name=mRNA_E-siliculosus-1a_F_contig1051.373.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=930bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1051:32823..36385+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |