mRNA_E-siliculosus-1a_F_contig1051.371.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1051.371.1 vs. uniprot
Match: A0A6H5JPP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP0_9PHAE) HSP 1 Score: 2441 bits (6326), Expect = 0.000e+0 Identity = 1338/1634 (81.88%), Postives = 1380/1634 (84.46%), Query Frame = 2 Query: 332 MLGTVIAPHPRSSNWGFGVVGASGVTGGPDIAADRGVEATLVEEDGGEEWASYAAGDSSIMDVPGFTTATKALTYRALSAVHPDGLNGLTIESIREGCPFAQEPDSPQADDFWDHSLSNAIISLGPPDEASGMSARDIYDVLDGVGTILTCCPGLLLDPGDAGASAXXXXXXXXXXXXSGTRPAVRTCGLLGVSIEGTSGLAAPAGE-DLNGSERGNVGFELTVIFSSVLRAARLPSVALDALHGAAGLTMTDRQRAAWETERALVWLQLGRVGEAVVGLKSALGWDAGDLRVLQPLGAALVAQGSVAEAGFHYLREAVEVQKSRIATVFKQIVRSQGLDPSILETKNRKEVLVTQRNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMATLEGWLGRQEPPVEDPPETARRHGHRATTSTSSNGGGDFEMPLSSCSFGALNYPDVAFDSLPLLAFADHRYPRRNRGGLEADDADSRRSPAGGXXXXXXXXXEGVPPRGVSGEVDGDAWRKPGLATAAAAAGKGLDENGGDDADTVSLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVIGSTESRSANLVFNHTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGIGSIDYYVVPEPLVADAWLGDGELRTARDSTCGGEELDEEEEDHFLFWERPAGPDGSRSDGGMKHRGVRHGSDATASDGGSDSGRRRNDAWQGRRDPPRSFVFPEPPTRDFAGPPLDPCDDDGNGEEPRNAFRCRNGLPPRAGGSGPATGAVEPDKKVGQTSGAAAGSGLGVEAGGGRAGSAGRSGMRLK---------VGMAAXXXXXXXXXXXXXXXXXXXXINLYGIFTDDGDLVEYESLVATLKERGKGREELERIVSALLEEQALLDEQEEGGDANGDEGGWWPEHDRERGDDSVSVATENQHGQHYPYGGDVETSARIHQRAGSRAARDDAQNGAKKSPASSRQEEILRRHVVGPGRLIIGGEEVDVGYSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVYEDGLFVDEYGRVFDXXXXXXXXXXXXXXXXXXXXXXXXXXXVYEGVLYDDDDVEGDAGGVYFFRNGDKPLDDDGGFADDVYFREHYDGDDRGCDRNSGDWPRPWANVHYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLARLADASEMRRRHLLPEMSYLAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEETTAEALRTEGEFYQHDHLQYASPPLWTEKLRSRLAARLGENIWRVHLLPPVDSWDYFAILGVADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARYVQALASDLGLPASCCAAATLTHYVDLAARLCLDEEWADEVSDILYAVRDWVYLTPEAPREKTHERRPPQPQPDQFSVGDHSQSAREGCGGADGADPPRAVRRGGRCSAWARGRRHVQEWAGFLWRVSRPGVPAEFPVDLRQEGGATRNHYCSARRRSNACG 5203
MLGTVIAPHPRSSN G G+VGASG+TG P + DR VE+TL EE GGEEW SYAAGDSS MD PGFTTATKALTYRALSA HPDGLNGLTIESIRE CPFAQEPDSP+ADDFWDHSLSNAIISLGPPDEASGMSARDIYDVLDGVGTILTCCPGLLLDPGDAGASAXXXXXXXXXXXX TR A+RTCGLLGVSIEGTSGLAAPAG+ DLNGSERGNVGFELTVIFSSVLRAARLPSVALDALHGAAGLTMTDRQRAAWETERALVWLQLGRVGEAVVGLKSALGWDAGDLRVLQPLGAALVAQGSVAE GFHYLREA E+QKSRIATVF+QIVR+QGLDPSILETKNRK RNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMATLEGWL RQEP VEDPP+ AR G DFE PLSSCSFGALNYPDVAFDSLPLLAFADHRYPRRNRGGLEADDA SRRSP GG EGVPPRGVSGEVDGDAWR PGL +AGKGLDENGGDDAD +SLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFE IALWGHAPTLGIGSIDYYVVPEPLVADAWLGD EL+TARDSTC GE LD+EEED FLFWERPAGPDGS +DGGMKHRGVRHGSDATA+DGG SGRRRNDAWQGRRDPPRSF FPEPPTRDF PPLDPCDDDGNGEE RNAFR RNGLPPRAGGSGPATGAV+P+KKVG+TSGAA A XXXXXXXXXXXXINLYGIFTDDGDLV+YESLVATLK RGKGRE+LERIVSALL+EQALLDEQE+GGDAN EGGWWPE DR+RGDDSV ATENQHGQHYP GGDVE SARIHQRA SRAARDDAQ+GAKKSPA RQE+ILRRHV+GPGR IIGGEEVDVG+SNG QG+YEDGLFVDEYGRVFD XXXXXXXXXXXXXXXXXXXXXXXX VYEGVLYDDDDVEGD GGVYFFRNGDKPL DDGGFADD YF+ +YDGDDRGCDR+SGDWPRPWA YAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLARLADASE+RRRHLLPEMS LAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEET AEALRTEGEFYQHDHLQYASPP+WTEKLRSRLAARLGENIWRVHLLPPVDSWDYFA+LGVADVVLDPFPVGNL+AAVDAFALGTPVVTLPSRQRAGARYVQALASDLGLPASCCAAATL+HYVDLAARLCLDEEWADEVSDILYAVR+WVYLTPEAPREK H+R PPQP PDQ GDHSQ AR+GCGGADG DPPRAVRRGGRCSAWARGRRH+QEWAGFLWRVSRPGVPAEF VDLRQEGGATRNHYCSA RRSNACG
Sbjct: 1 MLGTVIAPHPRSSNCGSGIVGASGITGAPGLVTDRVVESTLGEEGGGEEWESYAAGDSSTMDAPGFTTATKALTYRALSAGHPDGLNGLTIESIRESCPFAQEPDSPEADDFWDHSLSNAIISLGPPDEASGMSARDIYDVLDGVGTILTCCPGLLLDPGDAGASAXXXXXXXXXXXXXXTRSALRTCGLLGVSIEGTSGLAAPAGKADLNGSERGNVGFELTVIFSSVLRAARLPSVALDALHGAAGLTMTDRQRAAWETERALVWLQLGRVGEAVVGLKSALGWDAGDLRVLQPLGAALVAQGSVAE-GFHYLREAAELQKSRIATVFEQIVRNQGLDPSILETKNRK------RNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMATLEGWLRRQEPLVEDPPQPARXXXXXXXXXXXXXG--DFETPLSSCSFGALNYPDVAFDSLPLLAFADHRYPRRNRGGLEADDAGSRRSPEGGGGTGDGDKDEGVPPRGVSGEVDGDAWRMPGLV--GRSAGKGLDENGGDDADRLSLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFE-----------------------------------------------------------------------IALWGHAPTLGIGSIDYYVVPEPLVADAWLGDDELQTARDSTCEGEVLDDEEEDDFLFWERPAGPDGSGNDGGMKHRGVRHGSDATANDGGGGSGRRRNDAWQGRRDPPRSFGFPEPPTRDFGPPPLDPCDDDGNGEERRNAFRGRNGLPPRAGGSGPATGAVDPEKKVGETSGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAEMEGGEDDYXXXXXXXXXXXXINLYGIFTDDGDLVDYESLVATLKARGKGREKLERIVSALLDEQALLDEQEQGGDANEGEGGWWPEEDRQRGDDSV--ATENQHGQHYPNGGDVEMSARIHQRARSRAARDDAQDGAKKSPARLRQEDILRRHVIGPGRSIIGGEEVDVGHSNGDGSGDDGDNTFGGGAAYAGDFDEDDDD-QGMYEDGLFVDEYGRVFDGEXXXXXXXXXXXXXXXXXXXXXXXXGVYEGVLYDDDDVEGDGGGVYFFRNGDKPLGDDGGFADDDYFQGYYDGDDRGCDRSSGDWPRPWAGFDYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLARLADASEIRRRHLLPEMSSLAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEETPAEALRTEGEFYQHDHLQYASPPVWTEKLRSRLAARLGENIWRVHLLPPVDSWDYFAMLGVADVVLDPFPVGNLYAAVDAFALGTPVVTLPSRQRAGARYVQALASDLGLPASCCAAATLSHYVDLAARLCLDEEWADEVSDILYAVREWVYLTPEAPREKPHKRGPPQPPPDQLFGGDHSQRARQGCGGADGGDPPRAVRRGGRCSAWARGRRHLQEWAGFLWRVSRPGVPAEFSVDLRQEGGATRNHYCSAGRRSNACG 1549
BLAST of mRNA_E-siliculosus-1a_F_contig1051.371.1 vs. uniprot
Match: D8LAX0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX0_ECTSI) HSP 1 Score: 2263 bits (5864), Expect = 0.000e+0 Identity = 1217/1389 (87.62%), Postives = 1242/1389 (89.42%), Query Frame = 2 Query: 1079 MTDRQRAAWETERALVWLQLGRVGEAVVGLKSALGWDAGDLRVLQPLGAALVAQGSVAEAGFHYLREAVEVQKSRIATVFKQIVRSQGLDPSILETKNRKEVLVTQRNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMATLEGWLGRQEPPVEDPPETARRHGHRATTSTSSNGGG-DFEMPLSSCSFGALNYPDVAFDSLPLLAFADHRYPRRNRGGLEADDADSRRSPAGGXXXXXXXXXEGVPPRGVSGEVDGDAWRKPGLATAAAAAGKGLDENGGDDADTVSLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVIGSTESRSANLVFNHTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGIGSIDYYVVPEPLVADAWLGDGELRTARDSTCGGEELDEEEEDHFLFWERPAGPDGSRSDGGMKHRGVRHGSDATASDGGSD---SGRRRNDAWQGRRDPPRSFVFPEPPTRDFAGPPLDPCDDDGNGEEPRNAFRCRNGLPPRAGGSGPATGAVEPDKKVGQTSGAAAGSGLG--------VEAGGGRAGSAGRSGMRLKVGMAAXXXXXXXXXXXXXXXXXXXXINLYGIFTDDGDLVEYESLVATLKERGKGREELERIVSALLEEQALLDEQEE-GGDANGDEGGWWPEHDRERGDDSVSVATENQHGQHYPYGGDVETSARIHQRAGSRAARDDAQNGAKKSPASSRQEEILRRHVVGPGRLIIGGEEVDVGYSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVYEDGLFVDEYGRVFDXXXXXXXXXXXXXXXXXXXXXXXXXXXVYEGVLYDDDDVEGDAGGVYFFRNGDKPLDDDGGFADDVYFREHY-DGDDRGCDRNSGDWPRPWANVHYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLARLADASEMRRRHLLPEMSYLAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEETTAEALRTEGEFYQHDHLQYASPPLWTEKLRSRLAARLGENIWRVHLLPPVDSWDYFAILGVADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARYVQALASDLGLPASCCAAATLTHYVDLAARLCLDEEWADEVSDILYAVRDWVYLTPEAPREKTHERRPPQPQPDQFSVGDHSQSAREGCGGADGADPPRAVRRGGRCSAWARGRRHVQEWAGFLWRVSRPGVPAEFPVDLRQEGGATRNHYCSARRRSNACG 5203
MTDRQRAAWETERALVWLQLGRVGEAVVGLKSALGWDAGDLRVLQPLGAALVAQGSVAE GF YLREA E+QKSRIATVF+QIVR+QGLDPS+LETKNRKEVLVTQRNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMA LEGWL RQEP DFE PLS+CSFGALNYPDVAFDSLPLLAFADHRYPRRNRGG EA DAD RRSPAGG EGVPPRGVSGEVDGDAWRKPGLA +A KGLDENG DDAD +SLYG IGRLF RLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHV+GSTESRSANLVFN TASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGIGSIDYYVVPEPLVADAWLGD EL+ ARDSTC GE +D+EEED FLFWERPAGPDGS SDGGMKHRGVRHGSDATASDGG SGR RNDAWQGRRDPPRSFVFPEPPTRD+AGPPLDP DDDGNGEEPRNAFRCRNGLPPRAGGSGPATGAV+P+KKVGQTSGAA VEAGGGRAGSAGRSGMRLKVGMAA XXXXXXXX+NLYGIFTDDGDLVEYESLVATLKERGKGREELERIVSALL+EQALLDEQEE GGDANGDEGGWWPE RERGDDSV AT+NQHGQHYPYGGDVE SARIHQ A SRAARDDAQNGA KSPA SRQEEILRRHV+GPGRLIIGGEEVDVGYSNG QGVYEDGLFVDEYGRVFDXXXXXXXXXXXXXXXXXXXXXXXXXX VYEGVLYDDDDVEGD GGVYFFRNGDKPL DDGGFADD YF+EHY DG DRGCDR+SGDWPRPWA V YAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLARLADASEMRRRHLLPEMSYLAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEETTAEALRTEGEFYQHDHLQYASPPLWTEKLRSRLAAR+GENIWRVHLLPPVDSWDYFAILGVADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARYVQALASDLGLPASCCAAATL+HYVDLAARLCLDEEWADEVSDILYAVRDWVYLTPEAPREK H+RRPPQPQ D+FSV DHSQSAREGCGGADGADPPRAVRRGGR SAWARGRRHVQEWAGFLWRVSRPGVPAEFPVDLRQEGGATR+ YCSA RR NACG
Sbjct: 1 MTDRQRAAWETERALVWLQLGRVGEAVVGLKSALGWDAGDLRVLQPLGAALVAQGSVAE-GFRYLREAAELQKSRIATVFEQIVRNQGLDPSVLETKNRKEVLVTQRNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMAALEGWLRRQEPXXXXXXXXXXXXXXXXXXXXXXXXXXXDFETPLSTCSFGALNYPDVAFDSLPLLAFADHRYPRRNRGGFEAVDADYRRSPAGGGGDKD----EGVPPRGVSGEVDGDAWRKPGLA--GRSAWKGLDENGEDDADRMSLYGPIGRLFGRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGIGSIDYYVVPEPLVADAWLGDDELQKARDSTCEGEAIDDEEEDDFLFWERPAGPDGSGSDGGMKHRGVRHGSDATASDGGGGGGVSGRHRNDAWQGRRDPPRSFVFPEPPTRDYAGPPLDPFDDDGNGEEPRNAFRCRNGLPPRAGGSGPATGAVDPEKKVGQTSGAAXXXXXXXXXXXXXXVEAGGGRAGSAGRSGMRLKVGMAAAAEMEGAEEDYDXXXXXXXXMNLYGIFTDDGDLVEYESLVATLKERGKGREELERIVSALLDEQALLDEQEEEGGDANGDEGGWWPEEGRERGDDSV--ATKNQHGQHYPYGGDVERSARIHQHARSRAARDDAQNGAAKSPARSRQEEILRRHVIGPGRLIIGGEEVDVGYSNGGGGDGDNIFGGRGTYADDFDEDDDD---QGVYEDGLFVDEYGRVFDXXXXXXXXXXXXXXXXXXXXXXXXXXGVYEGVLYDDDDVEGDGGGVYFFRNGDKPLGDDGGFADDDYFQEHYYDGGDRGCDRSSGDWPRPWAGVDYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLARLADASEMRRRHLLPEMSYLAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEETTAEALRTEGEFYQHDHLQYASPPLWTEKLRSRLAARVGENIWRVHLLPPVDSWDYFAILGVADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARYVQALASDLGLPASCCAAATLSHYVDLAARLCLDEEWADEVSDILYAVRDWVYLTPEAPREKPHDRRPPQPQADRFSVDDHSQSAREGCGGADGADPPRAVRRGGRYSAWARGRRHVQEWAGFLWRVSRPGVPAEFPVDLRQEGGATRSQYCSAGRRPNACG 1377
BLAST of mRNA_E-siliculosus-1a_F_contig1051.371.1 vs. uniprot
Match: D8LAW9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW9_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 5.940e-16 Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = -1 Query: 601 MSLALMPEASSGGPRLMIALLRLWSQKSSAWGESGSWAKGQPSRMLSM 744
MSLALMPEASSGGPRLMIALLRLWSQKSSAWGESGSWAKGQ SRMLSM
Sbjct: 1 MSLALMPEASSGGPRLMIALLRLWSQKSSAWGESGSWAKGQLSRMLSM 48
BLAST of mRNA_E-siliculosus-1a_F_contig1051.371.1 vs. uniprot
Match: UPI00029A743C (TIGR03032 family protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00029A743C) HSP 1 Score: 87.8 bits (216), Expect = 1.870e-13 Identity = 65/205 (31.71%), Postives = 97/205 (47.32%), Query Frame = 2 Query: 4136 ANVHYAETVEEQVVFLESLGAFVQPPGWGGRLGSG-RLARLADASEMRRRHLLPEMSYLAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEETTAEALRTEGEFYQHDHLQYASPPLWTEKLRSRLAARLGENIWRVHLLPPVDSWDYFAILGVADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARYVQALASDLG 4747
A+ HY E ++V L++LG + + P + SG +L R A LP L + P ++ FHP FD + +LE P +VV+ +A WT++L+ R A L + RV LP V +F +L +ADVVLDPFP G +++ +A ++G P+VTLPS G R AL +G
Sbjct: 726 ADEHYTE----RLVQLQTLGTYYERP-----VNSGVKLERTAFG--------LPAGKRLYLCPQTLFKFHPLFDRVLKGILEADPDAELVVLEGRVSA----------------------WTDRLKQRWATALPDASRRVRFLPTVPREQFFQLLNLADVVLDPFPFGGGNSSYEALSMGVPIVTLPSEYLCG-RITHALYQKIG 890
BLAST of mRNA_E-siliculosus-1a_F_contig1051.371.1 vs. uniprot
Match: A0A7V2AL82_9PROT (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2AL82_9PROT) HSP 1 Score: 86.7 bits (213), Expect = 2.820e-13 Identity = 56/180 (31.11%), Postives = 85/180 (47.22%), Query Frame = 2 Query: 2129 VSLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVIGSTESRSANLVFNHTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGIGSIDYYVVPEPLVAD 2668
V + I ++ +LCP L W A PE++ E + R+ F+S F NH K + R F+VI+ + T S D + I + +L N A+ + +AH R D++ + D DA TY+LA+ R+APVQ+ WGH + GI ++DYYV L D
Sbjct: 300 VPVVCKITEMYAKLCPRL-----TWT-----ADHCQPESEA----ERSEKYRIGFLSHHFHNHTIGKLNRGFIEHFDRNRFDVIV--FRTGSIDDSGSQAIEKAADKVVHLPENLDAAQRLVAHERLDLLFYPDTGMDAFTYYLAYARLAPVQVTSWGHPISTGIANMDYYVSSHDLETD 463
BLAST of mRNA_E-siliculosus-1a_F_contig1051.371.1 vs. uniprot
Match: A0A3N5MR68_9PROT (Protein O-GlcNAc transferase (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5MR68_9PROT) HSP 1 Score: 86.3 bits (212), Expect = 3.100e-13 Identity = 68/230 (29.57%), Postives = 107/230 (46.52%), Query Frame = 2 Query: 4136 ANVHYAETVEEQVVFLESLG--AFVQPPGWGGRLGSGRLARLADASEMRRRHLLPEMSYLAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEETTAEALRTEGEFYQHDHLQYASPPLWTEKLRSRLAARLGENIWRVHLLPPVDSWDYFAILGVADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARYVQALASDLGLPASCCAAATLTHYVDLAARLCLD 4819
A HY+E ++ L LG A+ P RL D+ + R + LP ++L + P ++ FHP+FD +G +L P +V++ EG+F P W E LR R A L + + RV LP D+ +L V DV+LD ++ +++AFA GTPVVTLP+ + G R+ + + +G+ C A YV +A ++ D
Sbjct: 333 AQTHYSE----KLFLLHDLGTLAYYHRP------------RLPDSLKKREAYGLPADAHLYICPQTLFKFHPDFDAMLGNILRADPDGRLVLI-----------EGKF-----------PHWGELLRQRFARTLPDVLGRVLWLPVQKGDDFINLLAVCDVMLDTPHFNGMNTSLEAFAAGTPVVTLPTLLQRG-RHTFGMYAKMGIDD--CIARDPQDYVKIAVQIGTD 521
BLAST of mRNA_E-siliculosus-1a_F_contig1051.371.1 vs. uniprot
Match: A0A090AA90_9GAMM (TPR repeat-containing protein n=1 Tax=Thioploca ingrica TaxID=40754 RepID=A0A090AA90_9GAMM) HSP 1 Score: 85.9 bits (211), Expect = 4.420e-13 Identity = 57/180 (31.67%), Postives = 85/180 (47.22%), Query Frame = 2 Query: 4289 LPEMSYLAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEETTAEALRTEGEFYQHDHLQYASPPLWTEKLRSRLAARLGENIWRVHLLPPVDSWDYFAILGVADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARYVQALASDLGLPASCCAAATLTHYVDLAARLCLDEEW 4828
L E +L + P ++ FHP+FD + +L R P V++V F+QH WTE L+ R + I R+ LP + DYF +L + +V+LDP P G + + +AFALG P+VTLP G R+ A + + C A HYVD+ +L D +
Sbjct: 399 LAESDHLYICPQALFKFHPDFDEILAEILARDPQGLVILV------------AGFHQH----------WTELLQRRFQQTIPTVIERIRFLPRMTLSDYFNLLSLVEVMLDPLPFGGGNTSYEAFALGVPIVTLPIPFLRG-RFTYACYRQMEIMD--CVADNPQHYVDITLKLGTDPSY 553
BLAST of mRNA_E-siliculosus-1a_F_contig1051.371.1 vs. uniprot
Match: A0A5C1MB47_9DELT (Glyco_transf_41 domain-containing protein n=1 Tax=Geobacter sp. FeAm09 TaxID=2597769 RepID=A0A5C1MB47_9DELT) HSP 1 Score: 85.5 bits (210), Expect = 5.800e-13 Identity = 58/188 (30.85%), Postives = 88/188 (46.81%), Query Frame = 2 Query: 4289 LPEMSYLAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEETTAEALRTEGEFYQHDHLQYASPPLWTEKLRSRLAARLGENIWRVHLLPPVDSWDYFAILGVADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARYVQALASDLGLPASCCAAATLTHYVDLAARLCLDEEWADEVSDIL 4852
LP ++ P +Y HPEFD V +L P H+V + +G +H+HL LR RLA + + R+ +P + DY ++ V+DV+LDP G +++ +AFA+G P+VTLPS G R A +G C A + YV +A RL DE + D++
Sbjct: 381 LPADGHVYACPQSIYKIHPEFDAIVAGILAGDPKGHIVFI-----------QGSIPEHEHL-----------LRQRLARLIPDQDERIIFVPRMGEEDYLNLIAVSDVLLDPIHFGGGNSSAEAFAVGVPIVTLPSPYLRG-RLTYAWYRRMGFMD--CVADSPREYVSIAVRLGTDEAYRAFARDMI 543
BLAST of mRNA_E-siliculosus-1a_F_contig1051.371.1 vs. uniprot
Match: A0A496VYK3_9GAMM (Glyco_transf_41 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496VYK3_9GAMM) HSP 1 Score: 80.5 bits (197), Expect = 1.480e-12 Identity = 56/209 (26.79%), Postives = 100/209 (47.85%), Query Frame = 2 Query: 4253 LADASEMRRRHLLPEMSYLAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEETTAEALRTEGEFYQHDHLQYASPPLWTEKLRSRLAARLGENIW-RVHLLPPVDSWDYFAILGVADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARYVQALASDLGLPASCCAAATLTHYVDLAARLCLDEEWADEVSDILYAVRDWVY 4876
L S++R L ++ + P ++ FHP+FD + +L + V++V EG H H WTE L+ R + + + I R+ LP + +YF ++ ++DV+LDPF G + +A +GTP+VTLP++ G R+ A +G+ C A HYV++A +L ++ +++ + A +Y
Sbjct: 52 LPHFSKVRSDFGLANTDHIYLCPQALFKFHPDFDPILADILSQDDQGQVILV-----------EGN---HQH--------WTELLKKRFSQTIPKAINDRIRFLPRMTLGEYFNLIALSDVMLDPFHFGGGNTTYEALPIGTPIVTLPTQFMRG-RFTYACYRQMGVMD--CVAENPQHYVEIALKLGTQPDYREKIKTRILATHTKLY 235
BLAST of mRNA_E-siliculosus-1a_F_contig1051.371.1 vs. uniprot
Match: A0A6C0GCY4_9BACT (Tetratricopeptide repeat protein n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GCY4_9BACT) HSP 1 Score: 84.3 bits (207), Expect = 1.670e-12 Identity = 67/207 (32.37%), Postives = 93/207 (44.93%), Query Frame = 2 Query: 4289 LPEMSYLAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEETTAEALRTEG--EFYQHDHLQYASPPLWTEKLRSRLAARLGENIWRVHLLPPVDSWDYFAILGVADVVLDP-FPVGNLHAAVDAFALGTPVVTLPSRQRAGARYVQALASDLGLPASCCAAATLTHYVDLAARLCLDEEWADEVSDILYAVRDWVYLTPEAPRE 4900
+PE ++L V + HP+FD + +L L T+G F H TE L+SR A E R+H LP +D DYF +L +ADVVLD + G + DAFA+GTPV+TLP+ G RY A +G+ C AA YV A R+ E+ E+S + A V+ +A E
Sbjct: 503 IPEKAHLYVCTQNLRKVHPDFDQMIARILR------------------LDTQGILAFISDKHTTV------TELLKSRFAQHFPELTDRIHFLPRMDEDDYFQVLTLADVVLDTLYYGGGANTTYDAFAVGTPVITLPTEFHRG-RYAYAAYQQMGIEK--CIAANSNEYVQKAVRIASIPEYRAEISRKIKAAHQAVFEDKQAVTE 682 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1051.371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1051.371.1 >prot_E-siliculosus-1a_F_contig1051.371.1 ID=prot_E-siliculosus-1a_F_contig1051.371.1|Name=mRNA_E-siliculosus-1a_F_contig1051.371.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1742bp MQKCVVGRKRHHSRPSAAKAMPPLWGRPTTTGAVRTTQRCNATCSSGRLPback to top mRNA from alignment at E-siliculosus-1a_F_contig1051:12765..24112+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1051.371.1 ID=mRNA_E-siliculosus-1a_F_contig1051.371.1|Name=mRNA_E-siliculosus-1a_F_contig1051.371.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11348bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1051:12765..24112+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1051:12765..24112+ >mRNA_E-siliculosus-1a_F_contig1051.371.1 ID=mRNA_E-siliculosus-1a_F_contig1051.371.1|Name=mRNA_E-siliculosus-1a_F_contig1051.371.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=10452bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1051:12765..24112+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |