mRNA_E-siliculosus-1a_F_contig10506.368.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10506.368.1 vs. uniprot
Match: A0A6H5J8D6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8D6_9PHAE) HSP 1 Score: 200 bits (509), Expect = 4.960e-57 Identity = 102/128 (79.69%), Postives = 103/128 (80.47%), Query Frame = 1 Query: 1 QAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRESSFDSAFFLFRSLTELPAFQQVVVPKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV 384 QAIWIVSELCPRGSLRQVLDDRGT LTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDR+ PKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV Sbjct: 1146 QAIWIVSELCPRGSLRQVLDDRGTSLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRDGQLQ--------------------PKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV 1253
BLAST of mRNA_E-siliculosus-1a_F_contig10506.368.1 vs. uniprot
Match: A0A835Z8B5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B5_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.710e-46 Identity = 81/128 (63.28%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 4 AIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRESSFDSAFFLFRSLTELPAFQQVVVPKIGDWGSARALALYTG-VRSMTHGVGTTCWLAPEV 384 AIWIVSELC RGSLRQVLDDR LTP RLR+AVDVAEGMLYLH+R++P+IHRDLKSHN+F+ E ++PKIGDWGSARA+AL+TG +R+MTHGVGT CWLAPEV Sbjct: 97 AIWIVSELCSRGSLRQVLDDRSQQLTPVQRLRIAVDVAEGMLYLHTRDQPIIHRDLKSHNVFIQETATGE--------------------LLPKIGDWGSARAVALHTGGMRTMTHGVGTACWLAPEV 204
BLAST of mRNA_E-siliculosus-1a_F_contig10506.368.1 vs. uniprot
Match: A0A836CLH3_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLH3_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.470e-43 Identity = 80/129 (62.02%), Postives = 92/129 (71.32%), Query Frame = 1 Query: 1 QAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRESSFDSAFFLFRSLTELPAFQQVVVPKIGDWGSARALALYTG-VRSMTHGVGTTCWLAPEV 384 QAIWIVSELC RGSLRQVLDDR L RLR+AVD+AEGMLYLHSRE+P+IHRDLKSHN+F+ E ++PKIGDWGSARA+ L+TG +R+MTHGVGT CWLAPEV Sbjct: 96 QAIWIVSELCSRGSLRQVLDDRSQHLPLVMRLRIAVDIAEGMLYLHSREQPIIHRDLKSHNVFIQETATGE--------------------LLPKIGDWGSARAVMLHTGGMRTMTHGVGTACWLAPEV 204
BLAST of mRNA_E-siliculosus-1a_F_contig10506.368.1 vs. uniprot
Match: A0A7S3XPL6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPL6_HETAK) HSP 1 Score: 147 bits (371), Expect = 3.090e-40 Identity = 78/128 (60.94%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 1 QAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRESSFDSAFFLFRSLTELPAFQQVVVPKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV 384 Q++WIVSELC RGSLRQVL+DR T L+ R RL++A+DVAEGMLYLH+ E P++HRDLKSHNIF+ E +S EL A KIGDWGSARA+AL +G R+MTHGVGT CW+APEV Sbjct: 195 QSLWIVSELCSRGSLRQVLNDRRTRLSTRRRLQLAIDVAEGMLYLHNHEAPIVHRDLKSHNIFIHE-------------KSPHELEA-------KIGDWGSARAVAL-SGQRTMTHGVGTACWIAPEV 301
BLAST of mRNA_E-siliculosus-1a_F_contig10506.368.1 vs. uniprot
Match: A0A7S0CKJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CKJ9_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.050e-39 Identity = 72/132 (54.55%), Postives = 94/132 (71.21%), Query Frame = 1 Query: 1 QAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRESSFDSA----FFLFRSLTELPAFQQVVVPKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV 384 QAIWIVSELC GSLRQ+LDD+ L+ R RLR+A+ VAEGM+Y+H+++ P++HRDLKSHNIF+ E S D++ + + + ++ +V KIGDWGSARA G R+MTHGVGT CWLAPEV Sbjct: 24 QAIWIVSELCSLGSLRQLLDDKEKDLSIRLRLRLALHVAEGMMYMHTQDPPILHRDLKSHNIFVHETSSGSTDTSEKAGLMMDGNSYSENSCERHIVAKIGDWGSARAAL--AGSRTMTHGVGTACWLAPEV 153
BLAST of mRNA_E-siliculosus-1a_F_contig10506.368.1 vs. uniprot
Match: F0YIL7_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIL7_AURAN) HSP 1 Score: 135 bits (340), Expect = 9.930e-37 Identity = 71/129 (55.04%), Postives = 85/129 (65.89%), Query Frame = 1 Query: 1 QAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRESSFDSAFFLFRSLTELPAFQQVVVPKIGDWGSARALALYTGV-RSMTHGVGTTCWLAPEV 384 QAIWIVSELC GSLR VLDD L RLR+A+DVAEGMLYLH+R+ P++HRDLKSHN+F+ E R + +IGDWGSARA+A+ R+MTHGVGTTCWLAPE+ Sbjct: 78 QAIWIVSELCSHGSLRSVLDDASLELGLETRLRMAIDVAEGMLYLHTRDHPIVHRDLKSHNLFVAEVRGR---------------------MHVRIGDWGSARAVAMSPDFSRTMTHGVGTTCWLAPEL 185
BLAST of mRNA_E-siliculosus-1a_F_contig10506.368.1 vs. uniprot
Match: A0A7S2RPC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPC6_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.180e-35 Identity = 73/134 (54.48%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 1 QAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRESSFDSAFFLFRSLTELPAFQQVVVPKIGDWGSARALAL--YTGVRSMTHGVGTTCWLAPEVREEG 396 QAIW+VSELC GSLRQVLDD+ L R+++A+DVAEGMLYLHSR+ P+IHRD+KSHN+F+ E P+ + V KIGDWGSARA+AL ++MTHGVGT CWLAPEV + G Sbjct: 293 QAIWLVSELCSLGSLRQVLDDKHRELPISTRIQMAIDVAEGMLYLHSRDPPIIHRDIKSHNLFVQES------------------PSGEYCV--KIGDWGSARAVALAGQQNPKTMTHGVGTVCWLAPEVIKHG 406
BLAST of mRNA_E-siliculosus-1a_F_contig10506.368.1 vs. uniprot
Match: A0A1Z5K8N3_FISSO (Protein kinase domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8N3_FISSO) HSP 1 Score: 139 bits (349), Expect = 1.720e-35 Identity = 78/133 (58.65%), Postives = 93/133 (69.92%), Query Frame = 1 Query: 1 QAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMME---DRE--SSFDSAFFLFRSLTELPAFQQVVVPKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV 384 QAIWIVSELC +GSLRQ+LDD L+ RL++A+ VAEGM YLH++E P+IHRDLKSHNIF+ E D E S+ S + E Q VV+ KIGDWGSARA +G R+MTHGVGT CWLAPEV Sbjct: 846 QAIWIVSELCSQGSLRQLLDDNERVLSVDLRLQLALQVAEGMTYLHNQEPPIIHRDLKSHNIFVHETFTDAEDGSTTSSKPRISGQHYEKLETQSVVIAKIGDWGSARAAL--SGSRTMTHGVGTACWLAPEV 976
BLAST of mRNA_E-siliculosus-1a_F_contig10506.368.1 vs. uniprot
Match: A0A1Z5JH37_FISSO (Protein kinase domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JH37_FISSO) HSP 1 Score: 138 bits (348), Expect = 2.430e-35 Identity = 75/134 (55.97%), Postives = 93/134 (69.40%), Query Frame = 1 Query: 1 QAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFM------MEDRESSFDSAFFLFRSLTELPAFQQVVVPKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV 384 QAIWIVSELC +GSLRQ+LDD L+ RL++A+ VAEGM YLH++E P+IHRDLKSHNIF+ +ED ++ + +L Q VV+ KIGDWGSARA +G R+MTHGVGT CWLAPEV Sbjct: 627 QAIWIVSELCSQGSLRQLLDDNERVLSVDLRLQLALQVAEGMTYLHNQEPPIIHRDLKSHNIFVHETFTDVEDGSTTSSKPRISGQHYEKLET-QSVVIAKIGDWGSARAAL--SGSRTMTHGVGTACWLAPEV 757
BLAST of mRNA_E-siliculosus-1a_F_contig10506.368.1 vs. uniprot
Match: D7FTR3_ECTSI (Similar to Serine/threonine-protein kinase CTR1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR3_ECTSI) HSP 1 Score: 137 bits (344), Expect = 8.000e-35 Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 1 Query: 4 AIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRESSFD 219 AIWIVSELCPRGSLRQVLDDRGTPLTP ARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDR+ D Sbjct: 521 AIWIVSELCPRGSLRQVLDDRGTPLTPWARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRDEKAD 592 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10506.368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10506.368.1 >prot_E-siliculosus-1a_F_contig10506.368.1 ID=prot_E-siliculosus-1a_F_contig10506.368.1|Name=mRNA_E-siliculosus-1a_F_contig10506.368.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=133bp QAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEback to top mRNA from alignment at E-siliculosus-1a_F_contig10506:900..1955+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10506.368.1 ID=mRNA_E-siliculosus-1a_F_contig10506.368.1|Name=mRNA_E-siliculosus-1a_F_contig10506.368.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1056bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10506:900..1955+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10506:900..1955+ >mRNA_E-siliculosus-1a_F_contig10506.368.1 ID=mRNA_E-siliculosus-1a_F_contig10506.368.1|Name=mRNA_E-siliculosus-1a_F_contig10506.368.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=798bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10506:900..1955+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |