Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 0 |
| Cds size | 387 |
| Model size | 387 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927553.0312967-CDS-E-siliculosus-1a_F_contig10502:243..630 | 1622927553.0312967-CDS-E-siliculosus-1a_F_contig10502:243..630 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig10502 244..630 - |
| 1696318582.3880835-CDS-E-siliculosus-1a_F_contig10502:243..630 | 1696318582.3880835-CDS-E-siliculosus-1a_F_contig10502:243..630 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig10502 244..630 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10502.367.1 >prot_E-siliculosus-1a_F_contig10502.367.1 ID=prot_E-siliculosus-1a_F_contig10502.367.1|Name=mRNA_E-siliculosus-1a_F_contig10502.367.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=129bp
MSDVPVVPITQVNSQRDTFRTIGKDKAFENIAAALLQAPVFADQANQGAV
VTGKKVRTFYGSFMKKMKNDKDTSEFVSGTRDSEYGEQILRAVDEAMALD
DEAEEERARLKAGQVAELQHKEQQGDKVR back to topmRNA from alignment at E-siliculosus-1a_F_contig10502:244..630- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig10502.367.1 ID=mRNA_E-siliculosus-1a_F_contig10502.367.1|Name=mRNA_E-siliculosus-1a_F_contig10502.367.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=387bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10502:244..630- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCTGATGTCCCCGTTGTACCAATCACGCAGGTCAACAGTCAGCGGGA
CACTTTCCGTACGATCGGCAAGGATAAGGCGTTTGAGAACATTGCGGCAG
CTCTGTTGCAGGCGCCAGTGTTTGCCGATCAGGCCAACCAAGGGGCGGTG
GTCACCGGCAAGAAGGTACGCACTTTCTACGGCTCATTCATGAAGAAGAT
GAAGAACGACAAGGACACATCTGAGTTTGTGAGCGGGACACGAGACAGCG
AGTATGGTGAGCAGATATTGAGGGCGGTGGACGAGGCGATGGCGCTCGAC
GATGAGGCAGAGGAAGAACGGGCTCGCCTGAAGGCAGGCCAGGTTGCTGA
GCTTCAGCATAAGGAGCAACAAGGGGACAAAGTGAGA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10502:244..630- >mRNA_E-siliculosus-1a_F_contig10502.367.1 ID=mRNA_E-siliculosus-1a_F_contig10502.367.1|Name=mRNA_E-siliculosus-1a_F_contig10502.367.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=774bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10502:244..630- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCTGATGTCCCCGTTGTACCAATCACGCAGGTCAACAGTCAGCGGGA
CACTTTCCGTACGATCGGCAAGGATAAGGCGTTTGAGAACATTGCGGCAG
CTCTGTTGCAGGCGCCAGTGTTTGCCGATCAGGCCAACCAAGGGGCGGTG
GTCACCGGCAAGAAGGTACGCACTTTCTACGGCTCATTCATGAAGAAGAT
GAAGAACGACAAGGACACATCTGAGTTTGTGAGCGGGACACGAGACAGCG
AGTATGGTGAGCAGATATTGAGGGCGGTGGACGAGGCGATGGCGCTCGAC
GATGAGGCAGAGGAAGAACGGGCTCGCCTGAAGGCAGGCCAGGTTGCTGA
GCTTCAGCATAAGGAGCAACAAGGGGACAAAGTGAGAATGTCTGATGTCC
CCGTTGTACCAATCACGCAGGTCAACAGTCAGCGGGACACTTTCCGTACG
ATCGGCAAGGATAAGGCGTTTGAGAACATTGCGGCAGCTCTGTTGCAGGC
GCCAGTGTTTGCCGATCAGGCCAACCAAGGGGCGGTGGTCACCGGCAAGA
AGGTACGCACTTTCTACGGCTCATTCATGAAGAAGATGAAGAACGACAAG
GACACATCTGAGTTTGTGAGCGGGACACGAGACAGCGAGTATGGTGAGCA
GATATTGAGGGCGGTGGACGAGGCGATGGCGCTCGACGATGAGGCAGAGG
AAGAACGGGCTCGCCTGAAGGCAGGCCAGGTTGCTGAGCTTCAGCATAAG
GAGCAACAAGGGGACAAAGTGAGA back to top
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