mRNA_E-siliculosus-1a_F_contig1050.363.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1050.363.1 vs. uniprot
Match: D7FZC1_ECTSI (Cytochrome P450 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZC1_ECTSI) HSP 1 Score: 1194 bits (3090), Expect = 0.000e+0 Identity = 617/659 (93.63%), Postives = 628/659 (95.30%), Query Frame = 3 Query: 111 MGLPDLEFSLASWTLVALAALSAAALGKVGLGMLRAYYILRVRAGLPVVLWYPKFWRMDGRRQKGSSLSRVLKRMEVLEGPHGMYGTVFGTQAVVHVADPEAAALVLSQHTKRPGYDHFGSFFGRGVFTADGEEWKKKRATVAHALFRGSAMTASGGDVADTRGVVSGGVGGRRGAAGGSGKALAVLANEEADSLLREVEALREEGGELEVEVVRLLQRHTLNLVHRFLCGGEDVCASPERKHLLSRYLDAVTDMRMVILARSRSVWMFAWRWVYRAFSPFHARETKNMLPIREFAELVIETAVADGGKNQPEHGVRCTGGNSRDTAGGSSTGDTTVTNSSTSRKTNRVEGAMGREAVSAPIEEGGGSGERSAVGGGSREEGTGMAAGGRSGENAPKTALFNMAARESHRAYPGSMVDETITLLFAGQDTSAATLSWTMHLLSLPENRPHLLEVHREVLAAVGSPDGYVDCAGGGGGGFTAPATRDHNEKARQQRRPILPMLDACIRESQRLYPVAPFVVRHLSTDLRLKDGTLLPAGALACVWIYGLHRHPALWKSSDKFMPERWLNGARQPAGSFIPYASGPRGCVGRPFAGVALRILLARICLALDFSPASDDDAIDESGAAGSQGVVDAGLTKDMQAGFTVLPGGGVHLRLRKWE 2087 MGLPDLEF LASWTLVAL ALSAA LGKVGLGMLRAYYILRVRAGLPVVLWYPKFWRMDGRRQKGSSLSRVLKRMEVLEGPHGMYGTVFGTQAVVHVADPEAA LVLSQHTKRPGYDHFGSFFGRGVFTADGEEW+KKRATVAHALFRG A+TASGG VADTRGVVSG VGG RGAA GSGKALAVLANEEADSLLREVEALRE+GGELEVEVVRLLQ HTLNLVHRFLCGGE+VCASPERKHLLSRYLDAVTDMRMVILARSRSVWMFAW WVYRAFSPFHARETKNMLPIREFAELVIETAVADGGKNQPEHGVRCTGGNSRDTAGGSS GDTTVTNSSTSRKTNRVEGAM REAVS I EGG SG+RSAVGGGSRE RSGENAPKTALFNMAARESHRAYPGSMVDETITLLFAGQDTSAATLSWTMHLLSLPENRPHLLEVHREVLAAVGSPDGYVDCAGGG GGFTAPATR+HNE+ARQQRRP+LPM+DACIRESQRLYPVAPFVVRHLSTDLRLKDGTLLPAGALACVWIYGLHRHPALWKS DKFMP RWLNGARQPAGSFIPYASGPRGCVGRPFAGVALRILLARICLALDFSPAS+DDAIDES AAGS+G VDAGLTKDMQAGFTVLPGGGVHLRLRKWE Sbjct: 1 MGLPDLEFPLASWTLVALVALSAATLGKVGLGMLRAYYILRVRAGLPVVLWYPKFWRMDGRRQKGSSLSRVLKRMEVLEGPHGMYGTVFGTQAVVHVADPEAATLVLSQHTKRPGYDHFGSFFGRGVFTADGEEWRKKRATVAHALFRGGAVTASGGGVADTRGVVSGEVGGGRGAAVGSGKALAVLANEEADSLLREVEALREKGGELEVEVVRLLQCHTLNLVHRFLCGGENVCASPERKHLLSRYLDAVTDMRMVILARSRSVWMFAWGWVYRAFSPFHARETKNMLPIREFAELVIETAVADGGKNQPEHGVRCTGGNSRDTAGGSSAGDTTVTNSSTSRKTNRVEGAMAREAVSTLIGEGGRSGKRSAVGGGSREXXXXXXXXXRSGENAPKTALFNMAARESHRAYPGSMVDETITLLFAGQDTSAATLSWTMHLLSLPENRPHLLEVHREVLAAVGSPDGYVDCAGGGDGGFTAPATRNHNEEARQQRRPLLPMVDACIRESQRLYPVAPFVVRHLSTDLRLKDGTLLPAGALACVWIYGLHRHPALWKSPDKFMPGRWLNGARQPAGSFIPYASGPRGCVGRPFAGVALRILLARICLALDFSPASNDDAIDESEAAGSRGAVDAGLTKDMQAGFTVLPGGGVHLRLRKWE 659
BLAST of mRNA_E-siliculosus-1a_F_contig1050.363.1 vs. uniprot
Match: A0A835YLF9_9STRA (Cytochrome P450 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLF9_9STRA) HSP 1 Score: 338 bits (867), Expect = 1.420e-102 Identity = 260/736 (35.33%), Postives = 326/736 (44.29%), Query Frame = 3 Query: 171 LSAAALGKVGLGMLRAYYILRVRAGLPVVLWYPKFWRMDGRRQKGSSLSRVLKRMEVLEGPHGMYGTVFGTQAVVHVADPEAAALVLSQHTKRPGYDHFGSFFGRGVFTADGEEWKKKRATVAHALFRGSAMTASGGDVADTRGVVSGGVGGRRGAAGGSGKALAVLANEEADSLLREVEALREEGGE----------------------------LEVEVVRLLQRHTLNLVHRFLCGGEDVCASPERKHLLSRYLDAVTDMRMVILARSRSVWMFAWRWVYRAFSPFHARETKNMLPIREFAELVI---ETAVADGGKNQPEHGVRCTGGNSRDTAGGSSTGDTTVTNSSTSRKTNRVEGAMGREAV---SAPIEEGGGSGERSAVGGGSREEGTGMAAGGRSGENAPKTALFNMAARESH--RAYPGSMVDETITLLFAGQDTSAATLSWTMHLLSLPENRPHLLEVHREVLAAVGSPDGYVDCAGGGGGGFTAPATRDHNEKARQQRRPILPMLDACIRESQRLYPVA---------------PFVVRHLSTDLRLKD-GTLLPA----------GALAC--VWIYGLHRHPALWKSSDKFMPERWLNG----------------------------------ARQPAGSFIPYASGPRGCVGRPFAGVALRILLARICLALDFSPASDDDAIDESGAAGSQGVVDAGLTKDMQAGFTVLPGGGVHLRLRKW 2084 LSA A ++ +LRAYYILR RAG+P V W+PKFWR+D RQKG SL RVL RM L G H MYGTVFG QAV+HV DPEAAALVLSQ +K P YDHF F GRGVFTADG EW+ KR +V HALF+G+ + L L NE AD+L ++ G EVE+V +LQ+HTL ++H FL G + E+ L RYL AV ++RMVILAR+RS+WM A W YR FS + RE M PIR F+ + + E VA GG Q GV+ EG SAP+ E +A RESH + YPGSM+DE ITLLFAGQDTSAATLSW ++LLS P++R + + EV GG PA A R L ++DA ++E P +V + + ++ G G AC W LH HP LW+ ++F PERWL A G+F+P+A+GPRGCVG+PFA ++LR+LLAR+ A D + A D KDMQAGFTVLP GG+ LRL +W Sbjct: 23 LSAVAAFRMLAMVLRAYYILRFRAGVPTVFWWPKFWRIDENRQKGGSLRRVLPRMRALGGKHDMYGTVFGGQAVLHVVDPEAAALVLSQSSKAPAYDHFRGFCGRGVFTADGPEWRAKRQSVNHALFKGARLDR-----------------------------LDALVNEHADALCAQLSRAAGCSGTGAQXXXXXXXXXXXXXXXXXXXXXXXXXAEVEMVGVLQQHTLAIIHAFLTGSS-YTENKEQAALTPRYLAAVVEIRMVILARARSLWMLASSWAYRLFSDLYKREAAAMGPIRAFSRMALAAAEAGVASGGSAQ---GVK--------------------------------EGRRXXXXXXXXSAPLAE--------------------------------------LALRESHSEQRYPGSMLDEAITLLFAGQDTSAATLSWALYLLSQPQHRRYREALREEV------------------GGVCGPAESGAPVAAACLGR--LRLVDAVVKEIVXXXXXXXXXXXXXXXKGGERRPSIVGYCNLKFHAQETGAAFHVPETATRQCAWGTCACRTQWSRSLHHHPDLWERPEEFRPERWLGADLSKPFEHCWKQHQXXXXXXXXXXXXXXXXXRAAAPHAPGAFMPFAAGPRGCVGQPFAHISLRVLLARLARAFDTTLAGPAD-------------------KDMQAGFTVLPLGGLRLRLSRW 616
BLAST of mRNA_E-siliculosus-1a_F_contig1050.363.1 vs. uniprot
Match: A0A1Z5JE35_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JE35_FISSO) HSP 1 Score: 274 bits (700), Expect = 3.410e-80 Identity = 207/602 (34.39%), Postives = 280/602 (46.51%), Query Frame = 3 Query: 333 MEVLEGPHGMYGTVFG-TQAVVHVADPEAAALVLSQH---------------TKRPGYDHFGSFFGRGVFTADGEEWKKKRATVAHALFRGSAMTASGGDVADTRGVVSGGVGGRRGAAGGSGKALAVLANEEADSLLREVEALREEGGELEVEVVRLLQRHTLNLVHRFLCGGEDVCASPERKHLLSRYLDAVTDMRMVILARSRSVWMFAWRWVYRAFSPFHARETKNMLPIREFAELVIETAVADGGKNQPEHGVRCTGGNSRDTAGGSSTGDTTVTNSSTSRKTNRVEGAMGREAVSAPIEEGGGSGERSAVGGGSREEGTGMAAGGRSGENAPKTALFNMAARESHR-AYPGSMVDETITLLFAGQDTSAATLSWTMHLLSLPENRPHLLEVHREVLAAVGSPDGYVDCAGGGGGGFTAPATRDHNEKARQQRRPILPMLDACIRESQRLYPVAPFVVRHLS--TDLRLKDG---TLLPAGALACVWIYGLHRHPALWKSSDKFMPERWLN-GARQPAGSFIPYASGPRGCVGRPFAGVALRILLARICLALDFSPASDDDAIDESGAAGSQGVVDAGLTKDMQAGFTVLPGGGVHL 2069 M+ L+GP+ MYGTV+G + AVVHVA P AA +LS K P Y+HF +F G+GVFTADG++WK KRA V HALFR T SG +T L N A L++ ++ + E +V +LQ T++L++R++ E ++ +L+S YL++V +R++ILA+SRS+W RW+YR S +E + M+PIR+FA A QP +P AL M + +R A+ +++ E ITLLFAGQDTSAATLSWT+HLLSL E+ + V A V A ++ + +P LDA ++ES RLYPVAPF+VR ++ T+L DG LPAGALACVWIYGLHR+ A W++ ++F PERWL G GS++P+A GPR CVG+P A + LRI LA + A DF S + G TKDMQ GFTVLP GGV L Sbjct: 1 MKALQGPYDMYGTVYGLSTAVVHVAHPTAALAILSPAKQPKTSSPWLESTGIVKAPAYNHFQNFCGQGVFTADGQDWKNKRAAVIHALFR----TTSGNW--ETH--------------------LEQQVNRAAQKLVQTLQQTQPEPR----NIVPILQTSTISLIYRYITHTE---LPQKQSNLVSSYLESVIRIRLIILAQSRSLWFLLPRWIYRTCSALFRQEEETMIPIRDFATQACRVA-------QP---------------------------------------------------------------------------------GSPLDALRQMPIYQDNRSAFSENLIYEAITLLFAGQDTSAATLSWTLHLLSLHP------EIQQTVAAEV-------------------QAVLKESKDVSRADVSNMPWLDAVLKESMRLYPVAPFIVRKITRPTELPELDGRPSVTLPAGALACVWIYGLHRNDAFWENPNEFKPERWLKKGHEVVPGSYMPFAHGPRNCVGQPLAHIMLRIFLAHLLNAFDFQIPSGEP----------------GETKDMQVGFTVLPRGGVSL 440
BLAST of mRNA_E-siliculosus-1a_F_contig1050.363.1 vs. uniprot
Match: K0RG15_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RG15_THAOC) HSP 1 Score: 265 bits (676), Expect = 5.050e-74 Identity = 230/742 (31.00%), Postives = 301/742 (40.57%), Query Frame = 3 Query: 279 RMDGRRQKGSS-LSRVLKRMEVLEGPHGMYGTVFGTQA-VVHVADP---------------------------------------------------------EAAALVLSQHTKRPGYDHFGSFFGRGVFTADGEEWKKKRATVAHALFRGSAMTASGGDVADTRGVVSGGVGGRRGAAGGSGKALAVLANEEADSLLREVEALREEGGELE-----------VEVVRLLQRHTLNLVHRFLCGGE--------------DVCASPER---------------------------------------KHLLSRYLDAVTDMRMVILARSRSVWMFAWRWVYRAFSPFHARETKNMLPIREFAELVIETAVADGGKNQPEHGVRCTGGNSRDTAGGSSTGDTTVTNSSTSRKTNRVEGAMGREAVSAPIEEGGGSGERSAVGGGSREEGTGMAAGGRSGENAPKTALFNMAARESHRAYPG----SMVDETITLLFAGQDTSAATLSWTMHLLSL-PENRPHLLEVHREVLAAVGSPDGYVDCAGGGGGGFTAPATRDHNEKARQQRRPILPMLDACIRESQRLYPVAPFVVRHLSTDLRL------KDGTLLPAGALACVWIYGLHRHPALWKSSDKFMPERWLNGA-------RQPAGSFIPYASGPRGCVGRPFAGVALRILLARICLALDFSPASDD--DAIDESGAAGSQGVVDAGLTKDMQAGFTVLPGGGVHLRL 2075 + DGR+ GSS ++ +L RME L+GP+GMY TV+G + VVHVA P +AA L+ TK P YDHF +F G GVFTADG +WK KRA+V H L R S ++ +T L AN AD REV+A G LE ++VV +LQR T+ L++R + E D AS R K LL YLD+VT +RM+ILA+SRS W RW+YR SP + E K M PIR FA + A E +P + A+ A P ++DE ITLLFAGQDTSAATLSWT+HLLSL PE + L + E+ AA+ D TR ++ Q +P LDA I+ES RLYPVAPF+VR L++D+ + K+ LPA AC+WIY + R+P LW + F+PERW++ + + GS+IP+A GPR C+G+P A V LR+LLARI +D A D +A+ SGA L DMQAGFTVLP G+ LR+ Sbjct: 112 KRDGRKAMGSSSITNILPRMERLDGPYGMYATVYGVRTKVVHVAHPVPTRAILTGAGTIDVADVGECSYSRQRHSGRRTSLRGIISGSAKDAQVDGGTQPRRRSSAARFLTGSTKSPAYDHFKNFSGDGVFTADGADWKAKRASVLHCLIRNS-------NIEET---------------------LEAQANRSADCFEREVKAATLLGQNLEKAKSGRPSLRVIDVVPMLQRSTVGLIYRLITHHEIDFSPNLCESMTRLDTYASSRRGDPPSPRSSATSLERLVNSETSESGRCCQVSPTENDLDVKSLLPTYLDSVTKIRMIILAQSRSFWYLVPRWMYRLLSPMYREEEKTMKPIRNFALQTCKNAK----------------------------------------------------------------------------------------EGSPLDLMRKRASHSGSNAKPDLVSKDLLDEAITLLFAGQDTSAATLSWTLHLLSLHPEKQQKLAD---EIKAALDLSD-----------------TRRVSKNIISQ----MPYLDAVIKESMRLYPVAPFIVRKLTSDITIPNDSSGKERITLPAATFACIWIYAIQRNPRLWHQPEDFLPERWIDSSLRRMDLGQSEYGSYIPFAIGPRNCLGQPLAHVVLRVLLARI---VDKFRAIDPRYEALTRSGACFDS----KSLRMDMQAGFTVLPSNGLRLRM 706
BLAST of mRNA_E-siliculosus-1a_F_contig1050.363.1 vs. uniprot
Match: A0A7S1ZMQ3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMQ3_TRICV) HSP 1 Score: 250 bits (638), Expect = 3.510e-69 Identity = 222/730 (30.41%), Postives = 305/730 (41.78%), Query Frame = 3 Query: 306 SSLSRVLKRMEVLEGPHGMYGTVFGTQA-VVHVADPEAAALVLSQH------------------------------------------------------------TKRPGYDHFGSFFGRGVFTADGEEWKKKRATVAHALFRGSAMTASGGDVADTRGVVSGGVGGRRGAAGGSGKALAVLANEEADSLLREVEALRE----EGGELEVEVVRLLQRHTLNLVHRFL---------CGGE--------------------------------------DVCASPERKHLLSRYLDAVTDMRMVILARSRSVWMFAWRWVYRAFSPFHARETKNMLPIREFAELVIETAVADGGKNQPEHGVRCTGGNSRDTAGGSSTGDTTVTNSSTSRKTNRVEGAMGREAVSAPIEEGGGSGERSAVGGGSREEGTGMAAGGRSGENAPKTALFNMAARESHRAYPGSMVDETITLLFAGQDTSAATLSWTMHLLSL-PENRPHLLEVHREVLAAVGSPDGYVDCAGGGGGGFTAPATRDHNEKARQQRRPILPMLDACIRESQRLYPVAPFVVRHLSTDLRL-----------KDG--TLLPAGALACVWIYGLHRHPALWKSSDKFMPERWLNGARQP----------AGSFIPYASGPRGCVGRPFAGVALRILLARICLALDFSPASDDDAIDESGAAGSQGVVD--AGLTKDMQAGFTVLPGGGVHLRLRK 2081 S+++ +L RME L GP+GMYGTV+G VVH+A P A L+LS +K P Y+HF F G GVFTADG++WK KR ++ H L +G S +G+ K L AN ADS + ++E +G +V VV +LQR T+ L++RF+ C E ++ AS LLS YL++VT +RM+ILA+SRS+W RW YRAFS + +E M PIR+FA + + A + P +R RD+ G+ V G GE K ++DE ITLLFAGQDTSAATLSWT+HLL+L P+ + L E VL + D + H ++ +P++DA I+ES RLYPVAPFVVR L D+ + ++G T++P G +ACVWIY LHR+P W + F+PERW++ A + +F+P+A GPR C+G+P A V LRILLARI + D+ + + + + D AGL KDMQAGFTVLP GGV L + K Sbjct: 4 SAITNILPRMERLCGPYGMYGTVYGLSTRVVHIAHPVPARLILSGDGGAGGGPRGPSGKLAFADTGKSWRESLRNVLNPGVVSSSPSRGLSRSRSSLGMLASSSGASKAPAYNHFKDFSGDGVFTADGDDWKAKRNSLMHCLLKGCTSDKS-------KGI----------------KRLEREANRAADSFIEQIEHAGTNKTGKGRSGKVNVVPMLQRATIGLIYRFITHHNVDIFKCDDEKGTSERDYDRKSQEGDLPYLTSWRSSESSTCSECPNDHEIPASRPPSALLSSYLESVTQIRMIILAQSRSLWFLTPRWFYRAFSAMYCQEDSTMGPIRDFARMTCQNAR----EGSPLAMLRA-----RDSHAGAKGNPQXXXXXXXXXXXXXV---------------------------------------GNDGEGVTK-----------------DLMDEAITLLFAGQDTSAATLSWTLHLLALYPDIQRKLAEEVHNVLNEEPEEERCTDESA-------------HKSFFTKRLVTKMPLMDAVIKESMRLYPVAPFVVRRLPNDVTIPPENKAEGKGTREGKPTVIPEGTVACVWIYSLHRNPKFWHRPNDFVPERWMDPAVRALDEQKSRGLNTSAFMPFAYGPRNCLGQPLAHVILRILLARIMSKYEVV----DNRVQKLQTIVCKDMSDPVAGLRKDMQAGFTVLPSGGVRLSVLK 628
BLAST of mRNA_E-siliculosus-1a_F_contig1050.363.1 vs. uniprot
Match: B8BWN1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWN1_THAPS) HSP 1 Score: 216 bits (549), Expect = 6.060e-59 Identity = 152/448 (33.93%), Postives = 202/448 (45.09%), Query Frame = 3 Query: 810 DVCASPERKHLLSRYLDAVTDMRMVILARSRSVWMFAWRWVYRAFSPFHARETKNMLPIREFAELVIETAVADGGKNQPEHGVRCTGGNSRDTAGGSSTGDTTVTNSSTSRKTNRVEGAMGREAVSAPIEEGGGSGERSAVGGGSREEGTGMAAGGRSGENAPKTALFNMAARESHRAYPGS--------MVDETITLLFAGQDTSAATLSWTMHLLSL-PENRPHLLEVHREVLAAVGSPDGYVDCAGGGGGGFTAPATRDHNEKARQQRRPILPMLDACIRESQRLYPVAPFVVRHLSTDLRLK----------DGTLLPAGALACVWIYGLHRHPALWKSSDKFMPERWLNG-------ARQPAGSFIPYASGPRGCVGRPFAGVALRILLARICLALDFSPASDDDAIDESGAAGSQGVVDAGLTKDMQAGFTVLPGGGVHLRL 2075 DV + K LL YLDAVT +RM++LA+SRS+W RW YR FSP + E + M+PIR+FA L E AV E +P L ++ R SH + G ++DE ITLLFAGQDTSAATLSWT+HLLSL P+ + ++E R VL+++ D E + LP LDA I+ES RLYPVAPF+VR L+TD+ + T +P AC+WIY L R+P LW D+F+PERW++ +Q GS++P+A GPR C+G+P A V LR+LLARI + D A+ G + L KDMQAGFTVLP G+ ++L Sbjct: 82 DVKKDSQMKLLLPIYLDAVTKIRMIVLAQSRSIWYLLPRWAYRTFSPMYRDEERTMVPIRQFARLACENAV----------------------------------------------------------------------------------------EGSP---LELLSQRSSHASKEGEATSAVSKDLLDEAITLLFAGQDTSAATLSWTLHLLSLHPQEQQKVVEEVRSVLSSL-----------------------DEGEMVSKNTISQLPYLDAVIKESMRLYPVAPFIVRKLTTDVTIPIESQSVEDDATTTTIPESTFACIWIYALQRNPKLWTKPDEFIPERWIDPDLRSNDLGQQEVGSYMPFALGPRNCLGQPIAQVILRVLLARILNKYEVRDPKFD-ALQRLGEETGEAFDTKYLLKDMQAGFTVLPSNGLRIKL 414
BLAST of mRNA_E-siliculosus-1a_F_contig1050.363.1 vs. uniprot
Match: A0A7S2UL92_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UL92_9STRA) HSP 1 Score: 221 bits (562), Expect = 3.300e-58 Identity = 221/715 (30.91%), Postives = 304/715 (42.52%), Query Frame = 3 Query: 246 LPVVLWYPKFWR---MDGRRQK-------------GSSLSRVLKRMEVLEGPHGMYGTVFGTQA-VVHVADPEAAALVL----------------------SQHTKRPGYDHFGSFFGRGVFTADGEEWKKKRATVAHALFRGSAMTASGGDVADTRGVVSGGVGGRRGAAGGSGKALAVLANEEADSLLREVEALREEGGELEVE-------------VVRLLQRHTLNLVHRFLCGGE-----DVCASPERKHLLSRYLDAVTDMRMVILARSRSVWMFAWRWVYRAFSPFHARETKNMLPIREFAELVIETAVADGGKNQPEHGVRCTGGNSRDTAGGSSTGDTTVTNS--STSRKTNRVEGAMGRE-----------AVSAPIEEGGGSGERSAVGGGSREEGTG------MAAGGRSGENAPKTALFNMAARES-----HRAYPGS-----MVDETITLLFAGQDTSAATLSWTMHLLSL-PENRPHLLEVHREVLAAVGSPDGYVDCAGGGGGGFTAPATRDHNEKARQQRRPI--LPMLDACIRESQRLYPVAPFVVRHLSTDLRL-------KDGTLLPAGALACVWIYGLHRHPALWKSSDKFMPERWLN------GARQPAGSFIPYASGPRGCVGRPFAGVALRILLARICLALDFSPASDDDAIDESGAAGSQGVVDA-GLTKDMQAGFTVLPGGGVHLRLRK 2081 LP V+W P+F ++ QK S+++ +L +ME L GP+GM+GTV+G VVH+A P VL + TK P Y+HF +F G GVFT+DG+EWK KRA+V H L +G + S D + + L N AD +R+VE ++ + + E VV ++QR T+ L++RF+ E D + LD TD ET KN +H C+ D SS TT+ S + K + A R S+ +E EE G M A R+ +P L + + +P S M+DE ITLLFAGQDTSAATLSWT+HLLSL P+ + L+E R V+ +C D + ++ I +P LDA ++ES RLYPVAPF+VR L L + K T+LPAG+LAC+WIYGLHR+ LW D+F+P+RW++ Q G+F+P+A+GPR CVG+P A V LRI+LARI L + DD + G + +D L KDMQAGFTVLP GGV L + K Sbjct: 76 LPTVIWIPRFLNYTPLEDENQKEGTKSLPKKLKLGSSAITGILPKMERLGGPYGMFGTVYGLNTMVVHMAHPTPVRQVLMGIGGKPSSPSSGRRSSSVTTSAGATKSPAYNHFKNFSGDGVFTSDGDEWKAKRASVIHCLLKG--INGSNSDAS---------------------RRLEREVNRSADRFVRDVEKIQSQANIMPTEQDLSDNGNCAGFNVVPVMQRTTVELIYRFITHDEKSLDDDSFEEDNMSCQTNGCLDG-TDQD---------------------------DETXXXXXXXXXXXXXXXXXXTSSEKNLSQH--LCSAKVQGD-LNESSQHKTTLIQSYLQSVTKIRMIILAQSRSFWFLLPRWVYRTFSSMFQE--------------EEETMGPIRKFAMRAYLRAKPGSPLAMLQKQPSHSDSKMVKEKGFPESIVSKAMLDEAITLLFAGQDTSAATLSWTLHLLSLHPDIQQRLIEEIRMVMKT-------TEC--------------DWKKDGSMSKKSISKMPFLDAVLKESMRLYPVAPFIVRKLPEPLEIPAEKDPIKSPTILPAGSLACIWIYGLHRNKQLWDRPDEFIPDRWIDPQLRERDKGQNNGAFMPFAAGPRNCVGQPLAHVILRIMLARILLEYNVV---DDRLQSKQLKNGKETNIDPLCLRKDMQAGFTVLPVGGVQLTMLK 698
BLAST of mRNA_E-siliculosus-1a_F_contig1050.363.1 vs. uniprot
Match: A0A448ZT73_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZT73_9STRA) HSP 1 Score: 214 bits (545), Expect = 6.390e-57 Identity = 195/649 (30.05%), Postives = 283/649 (43.61%), Query Frame = 3 Query: 285 DGRRQKGSSLSRVLKRMEVLEGPHGMYGTVFG-TQAVVHVADPEAAALVL---------------------SQHT---KRPGYDHFGSFFGRGVFTADGEEWKKKRATVAHALFRGSAMTASGGDVADTRGVVSGGVGGRRGAAGGSGKALAVLANEEADSLLREVEAL--------REEGGELEVEVVRLLQRHTLNLVHRFLCGGEDVCASPERKHLLSRYLDAVTDMRMVILARSRSVWMFAWRWVYRAFSPFHARETKNMLPIREFAELVIETAVADGGKNQ----PEHGVRCTGGNSRDTAGGSSTGDTTVTNSSTSRKTNRVEGAMGREAVSAPIEEGGGSGERSAVGGGSREEGTGMAAGGR-SGENAPKTALFNMAARESHRAYPGSMVDETITLLFAGQDTSAATLSWTMHLLSL-PENRPHLLEVHREVLAAVGSPDGYVDCAGGGGGGFTAPATRDHNEKARQQRRPI-LPMLDACIRESQRLYPVAPFVVRHLSTDLRL----KDGTL-LPAGALACVWIYGLHRHPALWKSSDKFMPERWL-NGARQPA---GSFIPYASGPRGCVGRPFAGVALRILLARICLALDFSPA---SDDDAIDESGAAGSQGVVDAGLTKDMQAGFTVLPGGGVHLRL 2075 + ++ SS++R+L +M GP+GM+GTV+G T V+HVA P A +L SQ T K P YDHF F G GVFT DGE+WK KR+ + H L +G+A + S + L + AN A + R+V+AL + E G + ++ LLQR T+ ++R+L + P S + D + + S+ A + +ML A + I + ++ P R RD + T RV +A E+ + GR G P ++ + + +++ E TLLFAGQDT AATLSW +HLLSL P + L + +EVL A H ++ ++ + LP LDA ++ES RLYPVAPFVVRHL D+ + ++GT+ LPAGA A +WIYGLHR+P W D F+PERW N + P G+++P+ASGPR C+GRP A + LR +LA++ F+ A + D+A D L M+AGFTVLP GGV+L + Sbjct: 10 NDKKLSSSSVTRILPKMRKHGGPYGMFGTVYGITTPVIHVAHPIPAKAILNGRVNMNSKGVARRPSVSLPVSQSTPTSKAPSYDHFKDFMGMGVFTTDGEDWKAKRSAIIHHLIKGTASSTSE-----------------------LSQRLEIEANRAATTFCRQVQALQHDQSSSIKSEXGVVTTNIIPLLQRSTIGFIYRYLTSADPKWLLPVNMMCYSEHDDGXMTTASENSSVASSLDETASSVTGTDDDTCSLSSSSSMLNNYLSATMKIRMIILANSRSLWYLLPRCCYRLFSSLYRD-----------------EKMTLRVIHKFAEKAC---------------------EDAQXHSPLGRLRGSEGP----YSSENSDCKSSSENNLMYEATTLLFAGQDTGAATLSWALHLLSLYPHTQERLAKELQEVLDA-------------------DEIFXKHEDRIITKKMLLKLPYLDAVVKESMRLYPVAPFVVRHLQEDICIPKESENGTVTLPAGANALIWIYGLHRNPEFWACPDDFVPERWTDNSIKDPGQXNGAYMPFASGPRNCLGRPLAHINLRTILAKVIYEFKFTDARLRTADNADD--------------LRIAMEAGFTVLPTGGVNLEI 560
BLAST of mRNA_E-siliculosus-1a_F_contig1050.363.1 vs. uniprot
Match: A0A7S3V4R1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4R1_9STRA) HSP 1 Score: 213 bits (541), Expect = 2.880e-55 Identity = 210/738 (28.46%), Postives = 291/738 (39.43%), Query Frame = 3 Query: 291 RRQKGSSLSRVLKRMEVLEGPHGMYGTVFGTQA-VVHVADPEAAALVL--------------------SQHTKR------------PGYDHFGSFFGRGVFTADGEEWKKKRATVAHALFRGSAMTASGGDVADTRGVVSGGVGGRRGAAGGSGKALAVLANEEADSLLREVEALREEGGELEVEVVRLLQRHTLNLVHRFL------------------------------------------------------CGGEDVCAS--------------------PERK-------------HLLSRYLDAVTDMRMVILARSRSVWMFAWRWVYRAFSPFHARETKNMLPIREFAELVIETAVADGGKNQPEHGVRCTGGNSRDTAGGSSTGDTTVTNSSTSRKTNRVEGAMGREAVSAPIEEGGGSGERSAVGGGSREEGTGMAAGGRSGENAPKTALFNMAARESHRAYPGSMVDETITLLFAGQDTSAATLSWTMHLLSL-PENRPHLLEVHREVLAAVGSPDGYVDCAGGGGGGFTAPATRDHNEKARQQRRPILPMLDACIRESQRLYPVAPFVVRHLSTDLRL--------KDGTL-LPAGALACVWIYGLHRHPALWKSSDKFMPERWLNGARQPA--------GSFIPYASGPRGCVGRPFAGVALRILLARI---CLALDFSPASDDDAIDESGAAGSQGVVDAGLTKDMQAGFTVLPGGGVHLRLRK 2081 ++ S+++ +L RME L GP+G+Y TV+G V+H+A P A +L S+ KR P Y+HF +F G GVFTADG WK KR +V H L +G S + R AN AD+ L + +G +V +V LLQR T+ L++RF+ C +S ER+ LS YL+A+T++RM+ILA+SRS+W + YRAFS + E K M IR FA + + A P H +R SR+++ E K + N A ++DE ITLLFAGQDTSAATLSWT+HLLSL P + + + +E L+ G PA+ + K + + LDA IRES RL+PVAPFVVR + ++ + K T+ P AC+WIY LHR+ LW + F+PERWL+ Q G+FIP+A+GPR CVG+P A LRI+LARI C +D + + E A + L KDMQAGFTVLP GGV + +++ Sbjct: 95 KKMPSSNITNILPRMERLNGPYGIYATVYGVSTKVIHIAHPIPAKAILMGKSSDVPILSRQSNKTVKKSERKKRSSVADNLGAIKNPAYNHFKNFSGDGVFTADGITWKAKRTSVLHCLLKGCTKDESEESLRLER-----------------------EANIAADNFLSNSLSKGNDGNS-KVNIVPLLQRATIGLIYRFISHHDVDTHYQSQEKVQEVSSCRNTADGIVNFGESNDKIQNKIGYAFKGLNDSRNCDASTSNSSNSSVTDDSSTDRSIPIQNLSEEREIMNKGKGDDCNPFEFLSTYLEAITNIRMIILAQSRSIWFLLPQCFYRAFSSMYKEEEKQMKTIRRFARIACQNATI----GSPLHMLR-------------------------SRQSHNPE---------------------------------------------MKDDIKNGDAINKE------LLDEAITLLFAGQDTSAATLSWTLHLLSLNPSIQQRVTKEVKESLSNEG----------------LNPASTNRITKKMVSK---MSYLDAVIRESMRLFPVAPFVVRKIPEEVTIPGDPEISGKGETITFPKDTFACIWIYSLHRNQKLWHRPNDFVPERWLDPNLQKMDAAQTSHKGTFIPFAAGPRNCVGQPLAHNILRIMLARIMNECQVMDDRLNHFETTLTEEEAIQRE----LHLRKDMQAGFTVLPVGGVRIFIKR 705
BLAST of mRNA_E-siliculosus-1a_F_contig1050.363.1 vs. uniprot
Match: A0A7S4ERB2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ERB2_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.500e-53 Identity = 203/685 (29.64%), Postives = 297/685 (43.36%), Query Frame = 3 Query: 237 RAGLPVVLWYPKFWR------MDGRRQKGSSLSRVLKRMEVLEGPHGMYGTVFG-TQAVVHVADPEAAALVLSQH----------------------TKRPGYDHFGSFFGRGVFTADGEEWKKKRATVAHALFRGSAMTASGGDVADTRGVVSGGVGGRRGAAGGSGKALAVLANEEADSLLREVEALR--------EEGGELEVEVVRLLQRHTLNLVHRFL------------------CGGEDVCASPERKHLLSRYLDAVTDMRMVILARSRSVWMFAWRWVYRAFSPFHARETKNMLPIREFAELVIETAVADGGKNQ----PEHGVRCTGGNSRDTAGGSSTGDTTVTNSSTSRKTNRVEGAMGREAVSAPIEEGGGSGERSAVGGGSREEGTGMAAGGRSGENAPKTALFNMAARESHRAYPGSMVDETITLLFAGQDTSAATLSWTMHLLSLPEN-RPHLLEVHREVLAAVGSPDGYVDCAGGGGGGFTAPATRDHNEKARQQRRPILPMLDACIRESQRLYPVAPFVVRHLSTDLRL----KDGTL-LPAGALACVWIYGLHRHPALWKSSDKFMPERWLNG----ARQPAGSFIPYASGPRGCVGRPFAGVALRILLARICLALDFSPA---SDDDAIDESGAAGSQGVVDAGLTKDMQAGFTVLPGGGVHLRL 2075 R+GLP V W P+F ++ ++ SS++R+L +M GP GM+GTV+G T V+HVA P A +LS +K P YDHF F G+GVFT DG++WK KR + H L +G+A + S + L AN A + +V+AL+ + G + +V LLQR T+ ++R+L CG + + S E L S + V + + ++ SP + +ML A + I + ++ P R RD T D + + + + + + R + E GG P + + +A S +++ +++ E TLLFAGQDT AATLSWT+HLLSL + + L + REVL VD F R +K + LP LDA I+ES RLYPVAPFVVR L ++ + K T+ LPAG+ A +WIY LHR+P W D F+PERW++ Q GS++P+A GPR C+GRP A + LR +LA++ F+ + D+A D L +M+AGFTVLP GGVHL + Sbjct: 77 RSGLPTVYWRPRFMNYEYQPSINDQKLAPSSVTRILPKMRKHGGPFGMFGTVYGVTTPVIHVAHPIPAKAILSGRISANSKGVSRRPSVSIAHSTATSKAPSYDHFKDFMGKGVFTTDGDDWKAKRTAIMHHLIKGTASSTSE-----------------------LSQRLETEANRAATTFCGQVQALQLDQTGTTYNKRGVVTADVTPLLQRSTIGFIYRYLTNADPEWLLPVNMVCETKCGDDIMGISSENCSLASSTDETVASVSGIDDD------------IFSLSSP-----SSSMLNKYLSATVKIRMIILANSRSLWYLLPRWCYRFFSSLYRDEK---RTLDVIHEFAKMACEDAQPQSPLAR------LRESGG----------------------------PYNSDNSSSA--SRKSFNKNLMYEATTLLFAGQDTGAATLSWTLHLLSLYSHAQERLAKELREVLD--------VD------ENFVGSEERIITKKMILK----LPYLDAVIKESMRLYPVAPFVVRRLQEEIYIPMEKKGETMSLPAGSDALIWIYSLHRNPEFWGRPDDFIPERWIDSNLKDPGQSNGSYMPFAVGPRNCLGRPLAHINLRTILAKVIYEYKFTDIRLRTVDNAND--------------LRIEMEAGFTVLPTGGVHLEI 650 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1050.363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1050.363.1 >prot_E-siliculosus-1a_F_contig1050.363.1 ID=prot_E-siliculosus-1a_F_contig1050.363.1|Name=mRNA_E-siliculosus-1a_F_contig1050.363.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=675bp MGAAADAYWYHWRDGMGLPDLEFSLASWTLVALAALSAAALGKVGLGMLRback to top mRNA from alignment at E-siliculosus-1a_F_contig1050:14594..22036- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1050.363.1 ID=mRNA_E-siliculosus-1a_F_contig1050.363.1|Name=mRNA_E-siliculosus-1a_F_contig1050.363.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7443bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1050:14594..22036- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1050:14594..22036- >mRNA_E-siliculosus-1a_F_contig1050.363.1 ID=mRNA_E-siliculosus-1a_F_contig1050.363.1|Name=mRNA_E-siliculosus-1a_F_contig1050.363.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4050bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1050:14594..22036- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |