Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 1 |
| Cds size | 159 |
| Model size | 160 |
| Exons | 1 |
| Ec32 ortholog | Ec-13_004070.1 |
| Ec32 ortholog description | Hypothetical protein |
| Hectar predicted targeting category | no signal peptide or anchor |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927550.6954606-CDS-E-siliculosus-1a_F_contig1049:37130..37289 | 1622927550.6954606-CDS-E-siliculosus-1a_F_contig1049:37130..37289 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1049 37131..37289 + |
| 1696318581.2804868-CDS-E-siliculosus-1a_F_contig1049:37130..37289 | 1696318581.2804868-CDS-E-siliculosus-1a_F_contig1049:37130..37289 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1049 37131..37289 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1049.351.1 >prot_E-siliculosus-1a_F_contig1049.351.1 ID=prot_E-siliculosus-1a_F_contig1049.351.1|Name=mRNA_E-siliculosus-1a_F_contig1049.351.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=53bp
CSQNLFVARRRPKRREGQKGMNVERPLQVRQNTMAVCKQPPQVETSALEI
RR* back to topmRNA from alignment at E-siliculosus-1a_F_contig1049:37131..37289+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1049.351.1 ID=mRNA_E-siliculosus-1a_F_contig1049.351.1|Name=mRNA_E-siliculosus-1a_F_contig1049.351.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=159bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1049:37131..37289+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGTTCTCAGAATTTGTTTGTGGCACGGCGCCGGCCAAAGAGGCGAGAGGG
CCAGAAGGGAATGAATGTCGAGCGACCCCTGCAAGTGCGACAAAATACGA
TGGCTGTGTGTAAACAACCGCCGCAGGTGGAGACGTCCGCCTTGGAGATC
AGACGATGA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1049:37131..37289+ >mRNA_E-siliculosus-1a_F_contig1049.351.1 ID=mRNA_E-siliculosus-1a_F_contig1049.351.1|Name=mRNA_E-siliculosus-1a_F_contig1049.351.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=318bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1049:37131..37289+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGTTCTCAGAATTTGTTTGTGGCACGGCGCCGGCCAAAGAGGCGAGAGGG
CCAGAAGGGAATGAATGTCGAGCGACCCCTGCAAGTGCGACAAAATACGA
TGGCTGTGTGTAAACAACCGCCGCAGGTGGAGACGTCCGCCTTGGAGATC
AGACGATGATGTTCTCAGAATTTGTTTGTGGCACGGCGCCGGCCAAAGAG
GCGAGAGGGCCAGAAGGGAATGAATGTCGAGCGACCCCTGCAAGTGCGAC
AAAATACGATGGCTGTGTGTAAACAACCGCCGCAGGTGGAGACGTCCGCC
TTGGAGATCAGACGATGA back to top
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