mRNA_E-siliculosus-1a_F_contig1049.347.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1049.347.1 vs. uniprot
Match: D7FUL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL1_ECTSI) HSP 1 Score: 1550 bits (4013), Expect = 0.000e+0 Identity = 894/1018 (87.82%), Postives = 904/1018 (88.80%), Query Frame = 3 Query: 141 MWCGVIFVLLAYTGAAAAAAVTKAATGKEGINVALHAQSNYAVHGWVAGSEVTTSGLRRAFEALPCVRSCEAFAPFSYDGVSSRKWDLVIIEGYTGSVPAFIHEVRAGNDDVVVLFYCLDTYPSLSVVGNLDVDAFLTNSLALLPFLRQIAPASSLVHLAADPSVMQAVPFRQEYGHNVVYLGQFKSTKHRLVETLKEVAPFGLAIYGNGWGGVEGAEELLPFWRGILPLGDVAALYTSAKVVIATTETLQRSLGMVNNRVFEALSCGAAVVSDAFPAAEETFGDHVHFYRQPGDAARAVKHLLGNDTARTDLGRRGRELVLSKHTFASRVVTILSSVDEVVALKTEEKTSXXXXXXXXXXXXXXXXDIP-------------ARGAAGADAIAAAVDATAVPTGGGGVESCCQSGRGCRNAVEFTACPTPATAPGEGGETLATSVASCPPEGTXXGEEDAAVEDVRQRSRRHHDPFLPPSPPLREAAPVRAHQRPGQAQPLAHGAGEHATGSGDISGDDATQGTSCDGXXXXXXXXXXXXXXRXXXXXXACRXXXXXXXXXXXXXXXXXXXXXXXXXSRNGSGNPDYPLPQLLGRKKTPLVVRPNAPLVLVVYRSETPPPGQLRRDLQSAAGAVAGGARIAFMETTAETLGGRDSDVECSGWGRRIGAEELSRLKALQTRVSRLLADAGPAAAHGEHGDTPDVDFLGVEAAREAHGFMEWCCSVGMLIVYSNVGDPLERWFLHRLVGEHASRVVRTAFLAVAAGGPEGAEQQHDGVAXXXXXXXXXXXXXXXXXXXXXGQHGTEGAGRYXXXXXXXXXXXXXXXXXXXXXXNAPTSLEAQRLDRYEWVEHLGGCGEGRSCPGSVPSEGGCFAEETGGKTCPSASRLKNMIEQTLFGVSRHATISILEPREGTVFAARRSEMEGTGDWAQLRLRVKVVHPYFRTPDDGMWCVLLEDVEVGCRGDYDSRERGGYSHAVTIEIDPVVLPRRCRLQVVTKGGGVETPRVLNKSPPISVTIW 3155
MWCGVIFVLLAYTGAAAAAAVTKAATG EG+NVALHAQSNYAVHGWVAGSE+TTSGLRRAF ALPCVRSCE FAPFSYDGVSSRKWDLVIIEGYTGSVPAFIHEVRAGNDDVVVLFYCLDTYPSLSVVGNLDVDAFLTNSLALLPFLRQIAPASSLVHLAADPSVMQA PFR EY HNVVYLGQFK TKHRLVETLKEVAP+GLAIYGNGW GVEGAEELLPFWRGILPLGDVAALYTSAKVVIATTETLQRSLGMVNNRVFEALSCG AVVSDAFPAAEE FGDHVHFYRQPGDAARAVKHLLGNDTARTDLGRRGRELVLSKHTFASRVVTILSSVDEVVALK +E XXXXXXXXXXXXXXXX ARGAAGADAIAAAV ATAVP GGGGVESCCQSGR CRNAVEFTACPTP TAPGEGGE LATSV XX E AAVE+VR RSRRHHDP LPPSPPLR AAPVRAHQRPGQAQPLAHGAGEHATGSGDIS DDATQ TSCDGXXXXXXXXXXXXXX XXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX NPD P+PQLLGRKKTPLVVRPNAPLVLVVYRSETPPPGQLRRDLQSAAGAVAGGARIAFMETTAETLGGRDSDVECSGWGRRIGAEE SRLKALQTRVSRLLADAGPAAAHGEHGDTP+VDFLGVEAAREAHGFMEWCCSV MLIVYSNVGDPLERWFLHRLVGEHASRVVRTAFLAVAAGG EGAE+QH XXXXXXXXXXXXXGQHG APTSLEAQRLDRYEWVEHLGGCGEGRSCPGSVPSEGGCFAEET GKTCPS SRLKN IEQTLF VSRHATIS+LEPREGTVFAA RSE EG GDWAQLRLRVKVVHPYFRTPDDGMWCVLLEDVEVGCRGDYDSRERGGYSHAVT+EIDPVVLPRRCRLQVVTKGGGVETPRVLNKSPPISVTIW
Sbjct: 1 MWCGVIFVLLAYTGAAAAAAVTKAATGGEGVNVALHAQSNYAVHGWVAGSEITTSGLRRAFAALPCVRSCEIFAPFSYDGVSSRKWDLVIIEGYTGSVPAFIHEVRAGNDDVVVLFYCLDTYPSLSVVGNLDVDAFLTNSLALLPFLRQIAPASSLVHLAADPSVMQAAPFRPEYAHNVVYLGQFKGTKHRLVETLKEVAPYGLAIYGNGWSGVEGAEELLPFWRGILPLGDVAALYTSAKVVIATTETLQRSLGMVNNRVFEALSCGTAVVSDAFPAAEEMFGDHVHFYRQPGDAARAVKHLLGNDTARTDLGRRGRELVLSKHTFASRVVTILSSVDEVVALKNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGAAGADAIAAAVGATAVPKGGGGVESCCQSGRACRNAVEFTACPTPTTAPGEGGEILATSVXXXXXXXXXXXXEGAAVEEVRPRSRRHHDP-LPPSPPLRAAAPVRAHQRPGQAQPLAHGAGEHATGSGDISSDDATQATSCDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPDCPMPQLLGRKKTPLVVRPNAPLVLVVYRSETPPPGQLRRDLQSAAGAVAGGARIAFMETTAETLGGRDSDVECSGWGRRIGAEEFSRLKALQTRVSRLLADAGPAAAHGEHGDTPNVDFLGVEAAREAHGFMEWCCSVSMLIVYSNVGDPLERWFLHRLVGEHASRVVRTAFLAVAAGGSEGAEEQHS--------VARXXXXXXXXXXXXXGQHGK-----------------------------APTSLEAQRLDRYEWVEHLGGCGEGRSCPGSVPSEGGCFAEETRGKTCPSVSRLKNKIEQTLFRVSRHATISMLEPREGTVFAAERSEREGAGDWAQLRLRVKVVHPYFRTPDDGMWCVLLEDVEVGCRGDYDSRERGGYSHAVTVEIDPVVLPRRCRLQVVTKGGGVETPRVLNKSPPISVTIW 980
BLAST of mRNA_E-siliculosus-1a_F_contig1049.347.1 vs. uniprot
Match: A0A6H5KP81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP81_9PHAE) HSP 1 Score: 748 bits (1930), Expect = 2.570e-256 Identity = 472/666 (70.87%), Postives = 491/666 (73.72%), Query Frame = 3 Query: 840 AALYTSAKVVIATTETLQRSLGMVNNRVFEALSCGAAVVSDAFPAAEETFGDHVHFYRQPGDAARAVKHLLGNDTARTDLGRRGRELVLSKHTFASRVVTILSSVDEVVALKTEEKTSXXXXXXXXXXXXXXXX------------DIPARGAAGADAIAAAVDATAVPTGGGGVESCCQSGRGCRNAVEFTACPTPATAPGEGGETLATSVASCPPEGTXXGEEDAAVEDVRQRSRRHHDPFLPPSPPLREAAPVRAHQRPGQAQPLAHGAGEHATGSGDISGDDATQGTSCDGXXXXXXXXXXXXXXRXXXXXXACRXXXXXXXXXXXXXXXXXXXXXXXXXSRNGSGNPDYPLPQLLGRKKTPLVVRPNAPLVLVVYRSETPPPGQLRRDLQSAAGAVAGGARIAFMETTAETLGGRDSDVECSGWGRRIGAEELSRLKALQTRVSRLLADAGPAAAHGEHGDTPDVDFLGVEAAREAHGFMEWCCSVGMLIVYSNVGDPLERWFLHRLVGEHASRVVRTAFLAVAAGGPEGAEQQHDGVAXXXXXXXXXXXXXXXXXXXXXGQHGTEGAGRYXXXXXXXXXXXXXXXXXXXXXXNAPTSLEAQRLDRYEWVEHLGGCGEGRSCPGSVPSEGGCFAEETGGKTCPSASRLKNMIEQTLFGVSR 2801
+A +T +VVI+TTETLQRSL MVNNRVFEALSCGAAVV HLLGNDTARTDLGRRGRELVLSKHTFASRVVTILSS+DEVVALK +E+T XXXXXXXXXXX D+PARGAAGADAIAAAV+ATA+PTGGGGVESCCQSGR CRNAVEFTACPTP TAPGEGGE L T+V SCP EGT GE DAA E++RQ SR HHDPF PPSP LR A PVRAHQRP AQPL HGAGEHATGSGDIS DDATQGT C+G XXXX XXXXXX XXXXXXXXXXXXXXXXXX SRN SGNPDYPLPQLLGRKKTPLVVRPNAPLVLVVYRSE+PPPGQLRRDLQSAAGAVAGGARIAFMETTAETLG DS VEC GWGRRIGAEELSRL+ LQTRVSRLLADAG AAAHGEHG+T DVDFLGVEAAREAHGFMEWCCSVG DPLERWFLHRLVGEHASRVVRTAFLAVAAGGPE AEQQH GQHG A T LEAQRLD YEWVEHLGGCGEGRSCP SV SEGG FAEETGGKTCPSASRLKN +EQTLFGV +
Sbjct: 33 SARHTRVQVVISTTETLQRSLSMVNNRVFEALSCGAAVV-----------------------------HLLGNDTARTDLGRRGRELVLSKHTFASRVVTILSSMDEVVALKNQEETXXXXXXXXXXXXRLALLPGETTAAATARGDLPARGAAGADAIAAAVNATAMPTGGGGVESCCQSGRACRNAVEFTACPTPTTAPGEGGENLTTTVPSCPAEGTPPGE-DAATEELRQLSRPHHDPF-PPSPSLRAATPVRAHQRPDHAQPLVHGAGEHATGSGDISRDDATQGTPCNGSGDHSTKRRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGTKRATSRNDSGNPDYPLPQLLGRKKTPLVVRPNAPLVLVVYRSESPPPGQLRRDLQSAAGAVAGGARIAFMETTAETLGVSDSGVECFGWGRRIGAEELSRLQDLQTRVSRLLADAGRAAAHGEHGNTLDVDFLGVEAAREAHGFMEWCCSVG---------DPLERWFLHRLVGEHASRVVRTAFLAVAAGGPESAEQQHG--------FGRQEHEIARRRHGMAGQHGK-----------------------------ALTFLEAQRLDCYEWVEHLGGCGEGRSCPRSVLSEGGYFAEETGGKTCPSASRLKNKVEQTLFGVRK 621
BLAST of mRNA_E-siliculosus-1a_F_contig1049.347.1 vs. uniprot
Match: F0YNI7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNI7_AURAN) HSP 1 Score: 197 bits (501), Expect = 3.370e-48 Identity = 138/369 (37.40%), Postives = 186/369 (50.41%), Query Frame = 3 Query: 180 GAAAAAAVTKAATG-----KEGINVALHAQSNYAVHGWVAGSEVTTSGLRRAFEALPCVRSCEAFAPFSYDGVSSRKWDLVIIEGYTGSVPAFIHEVRAGNDDVVVLFYCLDTYPSLSVVGNLDVDAFLTNSLALLPFLRQIA-----------PASSLVH-----LAADPSVMQA----VPFRQEYGHNVVYLGQFKSTKHRLVETL----KEVAPFGLAIYGNGWGGV-----EGAEELLPFWRGILPLGDVAALYTSAKVVIATTETLQRSLGMVNNRVFEALSCGAAVV-------SDAFPAAEETFGDHVHFYRQPGDAARAVKHLLGNDTARTDLGRR----GRELVLSKHTFASRVVTILSS 1151
G AA V K A+G K+G+ +ALHAQS ++HGWVAGSEVTT GLRRA V E APF+Y+ +SR WD++++EG++G V + VR + +VV++ +CLDTYPSL + +D D FLTNS L ++A P + L LA DP M + V + VVYLGQ K L L + V+ LAIYG W + A + W+G LP ++A LY+ A VV+ TT++ QR LGMVNNRVFEAL+CG + D FP + H AA AV LL A + R RE + +HT+ +R IL +
Sbjct: 114 GVLVAATVFKWASGVADAAKDGLAIALHAQSKSSLHGWVAGSEVTTRGLRRALLRRGDVAFVEILAPFAYEAATSRLWDILLVEGFSGPVATLVRIVRRLHGNVVIIHWCLDTYPSLPTIAAIDADGFLTNSRLLAARGFEVAGGALDLQSAWFPTADLAPRGFAALAVDPDEMSSDSAFVSETNNAKNLVVYLGQPSQGKKMLANVLMSIHRNVSGARLAIYGTAWDRFALWDNDHAILVACCWQGALPSDEIARLYSEASVVLGTTDSSQRRLGMVNNRVFEALACGGGRLISVEEQGEDGFPELQAMLRGHGDVVYSATSAAAAVASLLTAQRATPMVIRNDAAAAREHITDRHTYDARAAGILEN 482
BLAST of mRNA_E-siliculosus-1a_F_contig1049.347.1 vs. uniprot
Match: A0A7S4EAD6_9STRA (Hypothetical protein n=5 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAD6_9STRA) HSP 1 Score: 182 bits (462), Expect = 1.300e-43 Identity = 132/350 (37.71%), Postives = 180/350 (51.43%), Query Frame = 3 Query: 228 GINVALHAQSNYAVHGWVAGSEVTTSGLRRAFEALPCVRSCEAFAPFSYDGVSSRKWDLVIIEGYTGSVPAFIHEVRAGNDDVVVLFYCLDTYPSLSVVGNLDVDAFLTNS--LALLPFLR----------------QIAPASSLVHLAAD------PSVMQAVPFRQEYGHNVVYLGQFKSTKHRLVETLK---EVAPFGLAIYGNGWGGV-----EGAEELLPFWRGILPLGDVAALYTSAKVVIATTETLQRSLGMVNNRVFEALSC-GAAVVS------DAFPAAEETFGDHVHFYRQPGDAARAVKHLL----GNDTARTDLGRRGRELVLSKHTFASRVVTILS 1148
G+ +ALHAQS ++HGWVAGSEVTT GLRRAF V E FAPF Y+G++ +WD++++EG++G V + I +R N + V +CLDTYP+L+ V +DVD+FLTNS LAL F +AP V LA D PS +A P + VVYLGQ +K L +TL +V L IYG+ W + A W+G LP G +A LY +A V++ TT++ QR LGMVNNRVFEAL+C G V+ D F H D +A+ LL + T + + R + HT+ +R IL+
Sbjct: 25 GLKIALHAQSKSSLHGWVAGSEVTTRGLRRAFLKRADVSIVEIFAPFCYEGIA-HQWDMLLVEGFSGPVQSVIRGMRRFNKQIAVFHWCLDTYPTLASVAAIDVDSFLTNSRLLALHGFTMAGGNVLGLASPWFHKANLAPRE-FVALAVDTREMKPPSDARAHPSSNDTV--VVYLGQPSYSKALLAKTLLALYDVPGVRLKIYGSAWDHFSLQDKDYARLAACCWQGRLPSGSIARLYANATVILGTTDSSQRRLGMVNNRVFEALACSGGQFVAVEERGVDFFSELRGAIRSHGVVTYATTDGIKAITDLLVAYHPSSTLLRRVAAKARAHAIRHHTYDTRAAIILN 370
BLAST of mRNA_E-siliculosus-1a_F_contig1049.347.1 vs. uniprot
Match: A0A7S3K3S3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3S3_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.780e-37 Identity = 125/350 (35.71%), Postives = 169/350 (48.29%), Query Frame = 3 Query: 231 INVALHAQSNYAVHGWVAGSEVTTSGLRRAFEALPCVRSCEAFAPFSYDGVSSRKWDLVIIEGYTGSVPAFIHEVRAGNDDVVVLFYCLDTYPSLSVVGNLDVDAFLTNS--------------LALLPFLRQIAPASS----LVHLAADPSVMQAVPFRQEYGHN-VVYLGQFKSTKHRLVE---TLKEVAPFGLAIYGNGWGGVEGAEE-----LLPFWRGILPLGDVAALYTSAKVVIATTETLQRSLGMVNNRVFEALSCGAAVVSDAFPAAEETFGDHVHFYRQ------------PGDAARAVKHLLGNDTARTDLGRRGRELVLSKHTFASRVVTILSSVDEV 1163
+++ALHAQS +HGWVAGSE+TT GL A V +CE FAPF Y + +R WD++IIEG++G V I VR N + + LDTYPSLS V L VD F TNS L P +A A + V L D S + + + VVYLGQ TK L+ T+ ++ L IYG+ W E + W+G L + LY A +++ TTE+ QR LGMVNNRVFEAL+ +A F A EE D R+ P AARAV L + R R + L +++++ R T+LS++ V
Sbjct: 17 LSIALHAQSRSELHGWVAGSEITTRGLCAALIKRKDVAACEIFAPFYYGALGTRIWDILIIEGFSGPVEHVIRTVRRMNRKAFIAHWFLDTYPSLSAVAALQVDLFFTNSRIVASRGFHAAAERLGQDPQQPWLAIADTKPRRFVALGVDESFCEKTQNDIQIDQSLVVYLGQASVTKRMLLPSLLTISQIPGIRLEIYGSAWDRFADEENKYLHLVQCCWKGKLESKAIPELYRRAAIILGTTESEQRKLGMVNNRVFEALASSSA--DTTFIAFEEKGNDEFIELRRLLQNSQHQLTFSPTQAARAVTKALRSVVQRE---RNNSDFCL-RNSYSRRADTMLSTISLV 360
BLAST of mRNA_E-siliculosus-1a_F_contig1049.347.1 vs. uniprot
Match: A0A7S1U936_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U936_9STRA) HSP 1 Score: 164 bits (415), Expect = 3.230e-37 Identity = 114/321 (35.51%), Postives = 171/321 (53.27%), Query Frame = 3 Query: 219 GKEGINVALHAQSNYAVHGWVAGSEVTTSGLRRAFEALPCVRSCEAFAPFSYDGVSSRKW-DLVIIEGYTGSVPAFIHEVRAGNDDVVVLFYCLDTYPSLSVVG-----NLDVDAFLTNSLALLPFLRQIAPASSLVH--LAADPSVMQAVPFRQEYGHNVVYLGQFKSTKHRLVET-LKEVAPFGLAIYGNGWGGVEGAEELLPFWRGILPLGDVAALYTSAKVVIATTETLQRSLGMVNNRVFEALSCGAAVVSDAFPAAEETFGDH-VHFYRQPGDAARAVKHLLGNDTARTDLGRRGRELVLSKHTFASRVVTILSS 1151
G +NV LH+Q+ G+ +GSEVTT G+ +A P ++S P Y+ + K D++IIEGY + + EV+ V ++F +LSV G +L VDA TNS + L + PA +VH LAA P+ V R+EY NV ++G++ +K + L E FGL ++G GW + +WRGILP GD+ A+Y +AKVV+ T Q SL MVNNRV + LS G ++SD F EE G+ V F + PGD +R + +L ++ R L G+++V+ H + +RV L++
Sbjct: 740 GGRALNVVLHSQTLCRDDGYTSGSEVTTFGMEQALLHRPDIQSVLRVGPGRYNKLWQMKHVDMMIIEGYHMGLEKEVFEVKKRWPKVFIIFV------NLSVSGFAWSVHLPVDAVFTNSGVMKTILMDVMPAR-IVHQPLAAMPASDPCVQ-REEYQVNVAHVGEYSKSKTDVYNMILNEAKDFGLVLWGRGWN----SSPWKDYWRGILPAGDLEAVYCNAKVVLGMTRDSQASLNMVNNRVLDVLSVGGVLISDYFYGVEEMLGNETVLFAKGPGDTSRHLTRVLNDEGYRDSLRLLGQQVVVKAHRWNTRVQNFLTA 1048
BLAST of mRNA_E-siliculosus-1a_F_contig1049.347.1 vs. uniprot
Match: A0A836CBD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBD8_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.590e-28 Identity = 83/188 (44.15%), Postives = 109/188 (57.98%), Query Frame = 3 Query: 231 INVALHAQSNYAVHGWVAGSEVTTSGLRRAFEALPCVRSCEAFAPFSYDGVSSRKWDLVIIEGYTGSVPAFIHEVR-AGNDDVVVLFYCLD-TYPSLSVVGNLDVDAFLTNSLALLPFLRQIAPASSLVHLAADPSVM--QAVPFRQEYGHNVVYLGQFKST--KHRLVETLKEVAPFGLAIYGNGWG 776
+NVALHAQ + G++ GS +TT G+++A + S + F PF+Y G+ R WD+ IIEGYT + AFIHEVR A + V FYCLD P L+ LDVD FLTNSL +L L++ AP + L LA D + Q +P VV++G + K L L E APFGL IYG+GWG
Sbjct: 32 LNVALHAQVDPG-SGFIVGSVLTTEGMKQAL-----LDSGKVFYPFAYTGLHDRVWDIAIIEGYTLMINAFIHEVRRASHGRTKVFFYCLDPALPGLTATAALDVDGFLTNSLPVLQVLQRSAPTAYLP-LAVDAAAFAFQPLPPPLPPAARVVFVGAGGALGIKKDLEWMLLEAAPFGLDIYGSGWG 212
BLAST of mRNA_E-siliculosus-1a_F_contig1049.347.1 vs. uniprot
Match: A0A6H5JH34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH34_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.390e-26 Identity = 72/156 (46.15%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 705 KHRLVETLKEVAPFGLAIYGNGWGGVEGAEELLPFWRGILPLGDVAALYTSAKVVIATTETLQRSLGMVNNRVFEALSCGAAVVSDAFPAAEETFGDHVHFYRQPGDAARAVKHLL------GNDTARTDLGRRGRELVLSKHTFASRVVTILSSV 1154
K L L+E APFGL IYGNGW + E +WRG+LP D+A +Y SA VVI T QR G +NNRV+EALS GA ++SD FPA E TFGD + + R+ GD AR ++ LL G D R+ R+++ HT++ RV ILS V
Sbjct: 4 KEMLPWMLREAAPFGLDIYGNGW---QDFPEFSEYWRGVLPQEDLAFVYGSALVVIGVTTDAQRESGKINNRVYEALSVGAPLISDHFPALETTFGDALLYARRRGDVARHIESLLHSQQAVGRDNTEASKRRQRRDMIEDGHTWSQRVEDILSFV 156
BLAST of mRNA_E-siliculosus-1a_F_contig1049.347.1 vs. uniprot
Match: A0A7S2SC32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SC32_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.920e-26 Identity = 59/110 (53.64%), Postives = 74/110 (67.27%), Query Frame = 3 Query: 357 FAPFSYDGV-SSRKWDLVIIEGYTGSVPAFIHEVRAGNDDVVVLFYCLDTYPSLSVVGNLDVDAFLTNSLALLPFLRQIAPASSLVHLAADPSVMQAVPFRQEYGHNVVY 683
FAPF Y+GV SS WDLV+ EG++G +P FIH +R + VVL +CLDTYP + + LDVD FLTNSLAL+P L IAP L LAADP+VM+ +P H +VY
Sbjct: 5 FAPFLYEGVTSSGAWDLVVTEGWSGPLPRFIHTIRRHSPAAVVLHWCLDTYPDSTAITRLDVDGFLTNSLALIPALASIAPTLFLP-LAADPAVMRPMPKDPPLAHPIVY 113
BLAST of mRNA_E-siliculosus-1a_F_contig1049.347.1 vs. uniprot
Match: D7FQ36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ36_ECTSI) HSP 1 Score: 124 bits (311), Expect = 3.840e-25 Identity = 70/156 (44.87%), Postives = 92/156 (58.97%), Query Frame = 3 Query: 705 KHRLVETLKEVAPFGLAIYGNGWGGVEGAEELLPFWRGILPLGDVAALYTSAKVVIATTETLQRSLGMVNNRVFEALSCGAAVVSDAFPAAEETFGDHVHFYRQPGDAARAVKHLL------GNDTARTDLGRRGRELVLSKHTFASRVVTILSSV 1154
K L L+E APFGL IYGNGW + E +WRG+LP D+A +Y SA V+ T QR G +NNRV+EALS GA ++SD FPA E TFGD + + R+ GD AR ++ LL G D R+ R ++ + HT++ RV ILS V
Sbjct: 4 KEMLPWMLREAAPFGLDIYGNGW---QEFPEFSEYWRGVLPQEDLAFVYGSALAVVGVTTDAQRGSGKINNRVYEALSVGAPLISDHFPALEATFGDALLYARRRGDVARHIESLLQSQQAVGCDNTEASNRRQRRAMIEAGHTWSQRVEDILSFV 156 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1049.347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1049.347.1 >prot_E-siliculosus-1a_F_contig1049.347.1 ID=prot_E-siliculosus-1a_F_contig1049.347.1|Name=mRNA_E-siliculosus-1a_F_contig1049.347.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1006bp MWCGVIFVLLAYTGAAAAAAVTKAATGKEGINVALHAQSNYAVHGWVAGSback to top mRNA from alignment at E-siliculosus-1a_F_contig1049:10593..23326+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1049.347.1 ID=mRNA_E-siliculosus-1a_F_contig1049.347.1|Name=mRNA_E-siliculosus-1a_F_contig1049.347.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=12734bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1049:10593..23326+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1049:10593..23326+ >mRNA_E-siliculosus-1a_F_contig1049.347.1 ID=mRNA_E-siliculosus-1a_F_contig1049.347.1|Name=mRNA_E-siliculosus-1a_F_contig1049.347.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6036bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1049:10593..23326+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |