mRNA_E-siliculosus-1a_F_contig1047.337.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A6H5JJG5_9PHAE (DMT protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJG5_9PHAE) HSP 1 Score: 838 bits (2164), Expect = 1.380e-300 Identity = 474/504 (94.05%), Postives = 479/504 (95.04%), Query Frame = 2 Query: 50 MDLWRALAMAVLVASRCSVSLQFGFAHQPLRSSSSRLMKKPQAGQADRLWARRRAGPSVRLSTAETGVPETAVSCDTSLKPNIDADGAGKDVATLPASKGKNIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAV-----GGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVVAGFLGGQADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLLLSLFXXXXXXXXXXXXXXXXXXXXXXATASAPTAAGQGDEEAAGKIA 1546 M LWRALAMAVL+ASRCSVSLQFGFAHQPLRSSSS MKK QAGQADRLW RRRAGPSVRLSTAETGVPET VSCDTSLKP+IDA+GAGKDVATLPASKGK IRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVA LNTARRHRTATA G R VEEEAELPPKEKAL NRYAARAGAELGLWLFLAGTV WGLELTSASRAGFLVQLTTVIVPVLEAF+GRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSEL LSALSLVVAGFLGGQADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAA+LLKESFRGVEAAGAGLLLLSLFXXXXXXXXXXXXXXXXXXXX ATASAPTAAGQGDEEAAGKIA Sbjct: 1 MYLWRALAMAVLLASRCSVSLQFGFAHQPLRSSSSHHMKKQQAGQADRLWTRRRAGPSVRLSTAETGVPETVVSCDTSLKPDIDANGAGKDVATLPASKGKIIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVASLNTARRHRTATAGECGRWGKRRGVEEEAELPPKEKALRNRYAARAGAELGLWLFLAGTV----WGLELTSASRAGFLVQLTTVIVPVLEAFVGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELALSALSLVVAGFLGGQADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAMLLKESFRGVEAAGAGLLLLSLFXXXXXXXXXXXXXXXXXXXXDEATASAPTAAGQGDEEAAGKIA 500
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A8J2ST49_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST49_9STRA) HSP 1 Score: 193 bits (490), Expect = 6.470e-52 Identity = 136/349 (38.97%), Postives = 181/349 (51.86%), Query Frame = 2 Query: 383 VLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVVAG----FLGGQADNFARFLGALA-SKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLLLSL 1414 VL +VP+ WGTYAP+VK +Y + PPG++F+ A YVV++ AVA P+ N RAG ELGL+LFL Q V GLE SA A FLVQ TTVIVPVLEA + + + + CA+A +GVA++ G+ T AP+ GDLL+ C+AL YS+HVVRL LD L LARAKA +E+G + LS+ FL G+A F +LA + PD + V+W GA+T AY +WAQ+ GQ V + ANLVY+ QP++S LFA LL E AG GL+L+++ Sbjct: 44 VLLSVPVAWGTYAPAVKAVYALPAPPPGVVFSLAYYVVALACLGAVAA--------------------------PRRSQ--NPLPYRAGGELGLYLFLGNLFQ--VVGLETVSADAAAFLVQTTTVIVPVLEARVTGKAVAGATYRNCAVAFLGVAVLCGEGL----------------ETGAAPAA-----------GDLLILCAALLYSVHVVRLSALAPGLDALDLARAKAAAEVGFAVLSVAALAAATPFLDGRA-----FAASLAHAAPDTTAALATAVVWCGAVTCAYTIWAQSFGQRGVTAARANLVYTSQPVFSALFAFGLLHEVPTAATLAGGGLILIAV 330
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: K0RU20_THAOC (EamA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RU20_THAOC) HSP 1 Score: 192 bits (488), Expect = 2.620e-50 Identity = 135/367 (36.78%), Postives = 197/367 (53.68%), Query Frame = 2 Query: 374 GLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAF-LGRRKLKP-QVWLACALATVGVALVSL--GGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVVAGFLGGQADNFARFLG---------------ALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLLLSLF 1417 G+LVL TVPL WGTY P+VKY+Y+M + PG +F+ Y+V+ +T ++ L + V E EE ++ R G ELG +LF+ +Q V GL+ A RA FLVQLTTV+VP++ A +G P Q WLAC +A VGV+++ + GG+ GA ISG T L S GDLL+ +A Y+LHVVRLGV+ + L+LA AKA +E LS +++ +G A +F+ A + P LL + + ++W G +T AY ++AQ+ GQ+ V+P+E+NL+Y+ QPL+S LFA LL E+ GA L+ L+L+ Sbjct: 122 GILVLLTVPLAWGTYTPAVKYMYEMEPAIPGFVFSAGYYLVAAVTLRLLSSLQANESNELK--VDRAEESEEGLDI-------------RGGWELGSYLFVGNALQ--VVGLQTVPADRAAFLVQLTTVLVPLVAALSVGALSAVPAQTWLACVVAFVGVSVMGIDDGGV---GAG----ISGGNPITLLHVS-----------PGDLLIVLAAFSYTLHVVRLGVYAPRTKPLALASAKATTEAFLSVAVVIILTIIGNNALEVPQFMQETGQGVINYFDALKTAASDNPRLLEISACAILWTGWVTCAYTIYAQSYGQSKVSPTESNLIYTTQPLFSSLFAYFLLGETLGAAGYVGATLICLALW 453
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A0G4H494_9ALVE (EamA domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H494_9ALVE) HSP 1 Score: 181 bits (458), Expect = 3.240e-46 Identity = 137/380 (36.05%), Postives = 194/380 (51.05%), Query Frame = 2 Query: 341 SKGKNIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAV--------AGLNTARRHRT---ATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSAL--------------SLVVAGFLGGQADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLL 1405 S+ K + S S LL L++V L+WGTY P +K LY + PP + NF+ Y+ S+ A A + T + + ++A G EVE+ E +LL AGAELGLWL+L Q ++GL+ T ASRA F VQ TTV+VP+L + G +++ +W++ ALA GV ++ G + LF SLS L +GDLLV SALFYS HVVRLG L L LA K +L ++ L SL + FL ++F +G + + VF V ++NG ++ YA WAQ+ GQ V+P+ ANL+YSLQP+W+ LFAA+LLKE G ++ Sbjct: 87 SETKELTSLGSALL-LSSVSLLWGTYTPIIKLLYNLPHPPPPMAVNFSAYLASIFLLLAARNLGSNGGADIETLQETSSDFHSSAKGREDEVEDSDE---SSVSLLP-----AGAELGLWLYLGSISQ--LFGLQNTPASRAAFEVQTTTVLVPLLASVTGGERVRGSLWVSVALAFAGVVTLAGGSV-----SLFPSEGQSLSLQNL-------------FKGDLLVILSALFYSSHVVRLGRVAPFLPALPLATTKIGVQLVIAGLVVAWTAYSEGESGGSLPLTLFLQDFVNSFGDSVGGNSFLNSVFFVFLIVSVYNGGVS-GYAAWAQSAGQKKVSPTAANLLYSLQPVWASLFAALLLKEQIETRTLTGGACII 436
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A7S2LKU0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LKU0_9STRA) HSP 1 Score: 177 bits (448), Expect = 4.020e-45 Identity = 131/382 (34.29%), Postives = 189/382 (49.48%), Query Frame = 2 Query: 344 KGKNIRSERSGLLVLATVPLVWGTYAPSVKYLYQ-MGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFL-GRRKLKP-QVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVVAGFLGGQADN---------------------FARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLLLSLF 1417 + NI G+LVL TVPL WGTY P VKY+Y+ M S PG +F+ Y+V+ ++ + ++ L + ++EEE N+ R G ELG +LF+ +Q V GL+ A RA FLVQLTTVIVP+L AF G P Q W AC +A GV ++ G+ T L P E S +GD L+ +A+ YS+HVVRLG + + + LA +KA +E LS + F+GG A + A G++ S L V +A ++W G +T AY ++AQ+ GQ V P+++NL+Y+ QPL+S LFA LL E GA L+ ++L+ Sbjct: 63 QSNNISQRSLGILVLLTVPLAWGTYTPVVKYMYEKMDPSMPGFVFSAGYYIVAAVSLSVLSQLQAKNDDQEIINTPNDLQIEEEN----------NKITTRGGWELGSYLFIGNGLQ--VVGLQTVPADRAAFLVQLTTVIVPLLSAFAAGNLSAIPLQTWAACIIAFSGVVIMGA-----------HDSGGAGDQTGLLPLNSLEFNVS---QGDALILLAAIAYSMHVVRLGEYAPRTTAIKLAASKATTEAFLSIALVATLFFVGGSAQSPLPEFVNKIGHEVVEYYNAISSAVMNGSVLSSGSSLGVSAAAILWTGWITCAYTIFAQSFGQGRVNPTDSNLIYTTQPLFSSLFAYFLLGEVLGVYGYIGAILIGMALW 418
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A7R9TUG6_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TUG6_9VIRI) HSP 1 Score: 172 bits (436), Expect = 2.160e-44 Identity = 128/345 (37.10%), Postives = 176/345 (51.01%), Query Frame = 2 Query: 380 LVLATVPLVWGTYAPS---VKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVVAGFLGGQADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLL 1405 LVL +VPL WGT+A + ++ PP + + + AA+ + AR RTA GGR A LP AL + R GAELG WLF+ ++Q ++ L LT+ASR FLVQ TTVIVP+LEA L RR + + W ACA+AT G+AL+S GG G A+ L P G+ GD L SA F+++HVVRL + L LA KA ++ L+ L++V+AG G + G + P + A+V WNG + +AY +WAQ Q +++ ANL YS QPL + AA L ES AAG L++ Sbjct: 9 LVLTSVPLAWGTWAVVNVLMLNVFVAAGVPPXXXXAINAGIQAA-SLAALTAVCAARAVRTA---GGRG-----ASLPAPS-ALPGAFTLRGGAELGAWLFMGSSLQ--LYALTLTTASRVAFLVQATTVIVPMLEAALCRRAVSGRTWFACAMATSGIALLSFGG-------------GGAPASALPP---------GHALGDALALTSAAFFAMHVVRLQGFAAACVPLELAWVKAATQAALT-LAVVLAGVAFGIFEVVPTLDGLAVAGPHTIAAVCALVAWNGVVPSAYTVWAQGFAQRAISAPRANLFYSAQPLAAAALAAAFLGESLGAHGAAGGALIV 318
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A7S3AAI5_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AAI5_9RHOD) HSP 1 Score: 171 bits (433), Expect = 8.000e-44 Identity = 132/352 (37.50%), Postives = 186/352 (52.84%), Query Frame = 2 Query: 383 VLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGR---RKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKL-DTLSLARAKALSELGLSALSLVVAGFLGGQADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESF------RGVEAAGAGLLLL 1408 +LA+VP+ W TY +V+ LY + PP L N Y+ S+ TF A R A + E+E P+ +++++ Y A G ELGL+LFL T+Q L+LT+AS+A F+VQ T+V+VP +EA LGR +K+ P V LA++G+ L S+ GA L PS L NL GD L +A+FYSLHV+RLG SKL DT LARAK + +L +++ V A D +L + L + +++W GA+TTAY WAQTRGQ SV PS A+++YS QP+WS + A ++L E GV A LL + Sbjct: 41 ILASVPVAWSTYNVAVRLLYSIDHPPPAPLINVGNYLTSLATF------QIALLVRFALSKFSGSWQASESESSPEYESMISYYYA--GFELGLYLFLGSTIQLEA--LKLTTASKAAFIVQTTSVLVPTIEAILGRFPFKKILPSV----VLASIGIILFSVDDPKSLGA--------------LDPSQL-------NL-GDSLALFAAVFYSLHVIRLGSLSSKLRDTFRLARAKTICQLCIAS---VYATLALTSTDGIGEYLDNVTFND--LQASALILVWLGAVTTAYPQWAQTRGQMSVPPSVASILYSTQPVWSSITAFVVLSEQLPLKDIIAGVAIISASLLAI 351
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A7S2HES8_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HES8_9STRA) HSP 1 Score: 174 bits (441), Expect = 2.040e-43 Identity = 132/375 (35.20%), Postives = 187/375 (49.87%), Query Frame = 2 Query: 353 NIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKL---KPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVVAGFLGGQADN--------------FARFLGALASKP---DLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLLLSLF 1417 N+ G+LVL TVPL WGTYAP VKY+Y++ PG +F+ YVV+ LT +A L T T R E E E E+ + GL+LFL +Q V GL+ A RA FLVQLTT++VP+++A L + L + W+AC LA GV ++ L G G D + SLS S+ + GDLL+ +A Y+LHVVRLG + + LA +KA +E LS ++ FL G D F +L + LL ++W G +T AY ++AQ+ GQ V+P++ANL+Y+ QPL+S LFA +L E+ GAGL+ +L+ Sbjct: 106 NVNERALGILVLMTVPLSWGTYAPVVKYVYEINPPVPGFVFSAGYYVVASLTLLTLASLTTTNDDDT------RKEGVETMEEGGVEEGM--DLXXXXXXXXGLYLFLGNALQ--VIGLKTVPADRAAFLVQLTTIMVPLVQATLVEKNLWSISIKTWVACLLAFSGVVVMGLDGKEMSGGD---SVLSSLS-----------SIVNTFTSGDLLIVSAAFVYTLHVVRLGRYAPYTTPIRLAASKATTEAILSVGLVLALLFLTGSDDQASFVTQTSHEISTFFTSIQNSLTTNAIPITTLLPAVGAILWTGWITCAYTIYAQSFGQRRVSPTDANLIYTTQPLFSALFAWGILGETLGKEGYVGAGLIGAALW 456
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A1Z5KLH4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLH4_FISSO) HSP 1 Score: 172 bits (436), Expect = 2.150e-43 Identity = 128/385 (33.25%), Postives = 191/385 (49.61%), Query Frame = 2 Query: 356 IRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNR---YAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVV---------------AGFL------GGQADNFARFL------GALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKES-----FRGVEAAGAGLLL 1405 + ++ G+ VLATVP+VWGTY P VK LY++ PG +F+ A + V+ ++ + P E +L + +AG ELG +LFL ++Q V GL+ ++ RAGFLVQLTT+IVP+++A L R + + W+AC LA G++++ G ++ K S S W S+ G D L+ +A+ YSLHVVRLG ++ L L KAL+EL LS ++L++ AG L G + F L G L + L V V+W G ++TAY +AQ+ GQ V P++ANL+YSLQP+++ +FA LL E+ F G G +LL Sbjct: 80 VSEKQIGIFVLATVPVVWGTYVPVVKGLYEIDPPIPGFVFSTAYFAVAAVSAFGLLSFQ-----------------------PSNESSLSSDDGWVVLQAGLELGFYLFLGNSLQ--VLGLKTITSERAGFLVQLTTIIVPIVQAALLRSSVSSRTWIACVLALAGISIMGYDG------EILKTQMSSFS---------WPSLKDG----DFLILGAAVVYSLHVVRLGRWANETSPLKLVAFKALTELILSIIALLLLTSVAPSSTGGIVPEAGLLTFAQETGLEISTFFETLQERIVSGTLTTSSIRLAV--GAVLWTGLISTAYTTFAQSFGQRRVKPADANLIYSLQPIFTAIFAYFLLGETMGMYGFVGGSVIGGAVLL 418
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A7S4GI16_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GI16_9EUGL) HSP 1 Score: 175 bits (443), Expect = 1.620e-42 Identity = 129/353 (36.54%), Postives = 178/353 (50.42%), Query Frame = 2 Query: 377 LLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSAL---SLVVAGFLGGQ--ADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFR-----GVEAAGAGLLL 1405 L VL +VPLVWGTYAP+V+++Y + PG+ F+ Y+V+ L +AVA A G E+A E+ R GAELG +LFL Q V GL+ T++ +A F+ QLTT+ VPVLEA L R + +W A +A GV +V+ G ++A A + L G LL+ + LFY+LH+VRLGV K D + LA +KA EL S L V+G G+ + + + S DL + A W GA+T Y +WAQ+ GQA + P EANL+YS QP+WS F A+LL E+ G GA +LL Sbjct: 377 LAVLFSVPLVWGTYAPAVRFIYTLPVKVPGIFFSSLYYLVATLFLSAVA----------AALRPGPGSAPEDA----AERQAAKRRTLLGGAELGGYLFLGSYAQ--VLGLQATTSGQAAFITQLTTISVPVLEALLNRTPVPRGLWAASFVALAGVLVVAADG---------------MAAVAAADP-------AATLPGFLLLGLATLFYTLHIVRLGVWAPKCDAIPLALSKAAWELLFSVALMGGLAVSGTDSGREIVTFLQQLMDGVLSLVDLQNLGLAAA-WTGAVTFGYTLWAQSFGQAGIRPVEANLIYSTQPIWSTFFGAVLLGETLGPAGVVGFVLIGAAMLL 690 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1047.337.1 >prot_E-siliculosus-1a_F_contig1047.337.1 ID=prot_E-siliculosus-1a_F_contig1047.337.1|Name=mRNA_E-siliculosus-1a_F_contig1047.337.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=500bp MDLWRALAMAVLVASRCSVSLQFGFAHQPLRSSSSRLMKKPQAGQADRLWback to top mRNA from alignment at E-siliculosus-1a_F_contig1047:5729..12808+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1047.337.1 ID=mRNA_E-siliculosus-1a_F_contig1047.337.1|Name=mRNA_E-siliculosus-1a_F_contig1047.337.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7080bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1047:5729..12808+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1047:5729..12808+ >mRNA_E-siliculosus-1a_F_contig1047.337.1 ID=mRNA_E-siliculosus-1a_F_contig1047.337.1|Name=mRNA_E-siliculosus-1a_F_contig1047.337.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3000bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1047:5729..12808+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |