mRNA_E-siliculosus-1a_F_contig1046.333.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1046.333.1 vs. uniprot
Match: D8LQZ6_ECTSI (Casein kinase (Serine/threonine/tyrosine protein kinase) (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ6_ECTSI) HSP 1 Score: 668 bits (1724), Expect = 1.280e-239 Identity = 339/359 (94.43%), Postives = 340/359 (94.71%), Query Frame = 1 Query: 16 PPLKAAIHDAPPCPPCLCFATPHHPACDACSWLLGRFLWAFVVTARAGSMLKRGEVVKDRWRIEERLGKGTFCELHRASDLTHKSEGAAVKVEVQGMQRSVLKWENQVVEGLQSLSCVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKRHYFDSNFTTNDLVRTHTIMVVQLLRQCKFLQEPDYKMVEYAIRDIQANLTQGEKDEEEAFLWDTP 1092
PPL AA PC FAT HHPACDACSWLLGRFL A VVTARAGSMLKRGEVVKDRW IEERLGKGTFCELHRASDLT SEGAAVKVEVQGMQRSVLKWENQVVEGLQSLSCVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKR YFDSNFTTNDLVRTHTIMVVQLLRQCKFLQEPDYKMVE+A RDIQANLTQGEKDEEEAFLWDTP
Sbjct: 3 PPLPAAAAH-----PCY-FATLHHPACDACSWLLGRFLSAVVVTARAGSMLKRGEVVKDRWLIEERLGKGTFCELHRASDLTGNSEGAAVKVEVQGMQRSVLKWENQVVEGLQSLSCVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKRRYFDSNFTTNDLVRTHTIMVVQLLRQCKFLQEPDYKMVEHAFRDIQANLTQGEKDEEEAFLWDTP 355
BLAST of mRNA_E-siliculosus-1a_F_contig1046.333.1 vs. uniprot
Match: A0A6H5L231_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L231_9PHAE) HSP 1 Score: 613 bits (1582), Expect = 1.770e-214 Identity = 305/310 (98.39%), Postives = 305/310 (98.39%), Query Frame = 1 Query: 163 MLKRGEVVKDRWRIEERLGKGTFCELHRASDLTHKSEGAAVKVEVQGMQRSVLKWENQVVEGLQSLSCVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKRHYFDSNFTTNDLVRTHTIMVVQLLRQCKFLQEPDYKMVEYAIRDIQANLTQGEKDEEEAFLWDTP 1092
MLKRGEVVKDRWRIEERLGKGTFCELHRASDLT KSEGAAVKVEVQGMQRSVLKWENQVVE LQSLSCVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKRHYFDSNFTTNDLVRTHTIMVVQLLRQCKFLQEPDYKMVE A RDIQANLTQ EKDEEEAFLWDTP
Sbjct: 1 MLKRGEVVKDRWRIEERLGKGTFCELHRASDLTRKSEGAAVKVEVQGMQRSVLKWENQVVEDLQSLSCVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKRHYFDSNFTTNDLVRTHTIMVVQLLRQCKFLQEPDYKMVERAFRDIQANLTQAEKDEEEAFLWDTP 310
BLAST of mRNA_E-siliculosus-1a_F_contig1046.333.1 vs. uniprot
Match: A0A835YU46_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU46_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.400e-70 Identity = 144/335 (42.99%), Postives = 196/335 (58.51%), Query Frame = 1 Query: 163 MLKRGEVVKDRWRIEERLGKGTFCELHRASDLT--------HKSEG-----------AAVKVEVQGMQRSVLK---WENQVVEGLQSLSCVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKRHYFDSNFTTNDLVRTHTIMVVQLLRQCKFL---QEPDYKMVEYAIRDIQANLTQGEKDEEEAFLWDTP 1092
ML GEV+ R+R+E +L +GTF EL++A D ++ G A+KVEVQGMQ+SVLK WE+ V+ LQSL V R+ HG+K+VLVMELL G D+ ALR RQ PG+ +P+ C DLA +ML CL+G+H GYLHRDVKP+NFVRR + K+ ++DFGLA ++ G MR ER AEFRGT+ YAS AH+ +DQSR+DDL +L+YVFLDL G+LPW+ R K K E +K+ Y ++ F + I + +LR K L P Y ++ A+ D++A ++ F WD P
Sbjct: 1 MLHTGEVIGGRYRVERKLERGTFTELYQAVDTRPPKASPDGRRANGDAAKQPPAPTRVALKVEVQGMQQSVLKASGWESYVLRELQSLPFVARYVGQHTHGDKEVLVMELLHGGDVRALRMRQ-NCPPGT-------PMPISACIDLAQEMLRCLEGLHGAGYLHRDVKPSNFVRRNRGDKQLCLVDFGLANKYMKSDGVMRDERPHAEFRGTTTYASPYAHDFKDQSRRDDLFALVYVFLDLARGELPWSAAVRAKNKDEVARLKKEYLNAPFMKT---LPYNIAIGTMLRHLKALAWGDAPSYALLRRALEDMRAFAPHADEAPRLDFNWDPP 324
BLAST of mRNA_E-siliculosus-1a_F_contig1046.333.1 vs. uniprot
Match: A0A7S2Y1F0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F0_9STRA) HSP 1 Score: 218 bits (555), Expect = 4.730e-64 Identity = 126/286 (44.06%), Postives = 168/286 (58.74%), Query Frame = 1 Query: 280 AVKVEVQGMQRSVLKWENQVVEGLQSLSCVPRHYLFG----KHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKRHY------FDSNFTTNDLVRTHTIMV-----VQLLRQCKFLQEPDYKMVEYAIRDIQANLTQGEKDEEEAFLWDTP 1092
A+KVE +GM SVLKWEN+V+ LQS VPRH+ FG G + VLVM++L G+DMSALRHRQP +PL VC L QML+CLK +H+ G++HRDVKP+NF+R + F IIDFGL K+++ E G +R ER AEFRGT+M+AS+ HE RDQS +DDL SL+YVFL+LY G+LPW + A K+K + KR F F D + V +Q L + Q PDY + D++ + +G D F+W+ P
Sbjct: 3 AIKVENEGMVNSVLKWENEVLLALQSSPHVPRHHWFGVVNFSKGARPVLVMQMLGGKDMSALRHRQPSL-----------RMPLQVCLQLTYQMLDCLKSLHALGFVHRDVKPSNFIRDSPTSRRFYIIDFGLNKRYRWEGGVVRPERPHAEFRGTTMFASVKVHEGRDQSPRDDLISLVYVFLELYLGRLPWFQEAVDKQKDIVLQKKRDLMTNWRSFGPEFCHEDCESPAEVGVAASHLLQTLSGLTYDQHPDYDHFRQTLEDLEPCVQEGAADR---FVWEIP 274
BLAST of mRNA_E-siliculosus-1a_F_contig1046.333.1 vs. uniprot
Match: A0A418B209_9STRA (Protein kinase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B209_9STRA) HSP 1 Score: 212 bits (540), Expect = 9.800e-60 Identity = 117/299 (39.13%), Postives = 183/299 (61.20%), Query Frame = 1 Query: 160 SMLKRGEVVKDRWRIEERLGKGTFCELHRASDLTHKSEGAAVKVEVQGMQRSVLKWENQVVEGLQSLS-CVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANF-VRRKKNGKEFVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKRHYFDSNFTTNDLVR-----THTIMVVQLLRQCKFLQEPDYKMVEYAIRDIQ 1035
++L GE++ +RWR+ E++G+GTF +++ ASD+T+ S AVKVE + VL+WE+QV+ LQ S V +++ GKHG +LVMELL G++MS +R +QP A+ G +PL C A+QML+CL+ H G++HRD+K +NF + K+ K + IIDFGL+KQ G R++AEFRGTSMYASL AH D R+DDL S +Y+ LD G+LPWA A++K ++ E+K ++ + + +V H + +++ L+ + P+Y + AI+ ++
Sbjct: 5 NLLLNGEILLNRWRVVEKIGEGTFSQIYTASDMTNSSHRVAVKVEAPSQMKPVLEWESQVLVALQRKSPYVCKYHHHGKHGENFILVMELL-GDNMSKIR-QQPDAVHG---------VPLTKCVSAAIQMLDCLESFHHAGFIHRDIKASNFALSNGKDPKRYFIIDFGLSKQHLDPQGAPIPPRDKAEFRGTSMYASLQAHRREDLGRRDDLWSWMYLVLDFVRGELPWAHDAQKKNREVVVELKEYFTEQH--PEQMVEGLPGARHLLAIMEYLKTLGYGDVPNYSYIRKAIKAVE 290
BLAST of mRNA_E-siliculosus-1a_F_contig1046.333.1 vs. uniprot
Match: A0A6G0WFR9_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WFR9_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.030e-57 Identity = 116/301 (38.54%), Postives = 180/301 (59.80%), Query Frame = 1 Query: 160 SMLKRGEVVKDRWRIEERLGKGTFCELHRASDLTHKSEGAAVKVEVQGMQRSVLKWENQVVEGLQSLS-CVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFV--RRKKNGKEFVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKRHYFDSNFTTNDLV------RTHTIMVVQLLRQCKFLQEPDYKMVEYAIRDIQ 1035
++L G+++ +RWR+ E++G+GTF +++ A DLT+ + AVKVE + VL+WE+QV+ LQ S V +++ GKHG +L+MELL G++MS +R QP A G +PL C A+QML+CL+ H+ GY+HRD+K +NF K+ K + IIDFGL+KQ G RE+AEFRGTSMYASL AH D R+DDL S +Y+ LD G+LPWA A++K ++ EMK ++ + + +L+ H + +++ L+ + P+Y + I+ ++
Sbjct: 5 NLLLNGDILLNRWRVMEKIGEGTFSQIYTAFDLTNSAHKVAVKVEAPSQMKPVLEWESQVLLSLQKKSPYVCKYHHHGKHGENFILIMELL-GDNMSKIRS-QPDATHG---------VPLTKCVSAAVQMLDCLESFHNAGYIHRDIKASNFALSNGKEANKRYHIIDFGLSKQHLDPEGKPMMAREKAEFRGTSMYASLQAHRREDLGRRDDLWSWMYLVLDFIRGELPWAYDAQKKNREVVIEMKEYFTELH---PELIVEGLPGARHLLAIMEYLKTLGYADAPNYNFIRKHIKAVE 291
BLAST of mRNA_E-siliculosus-1a_F_contig1046.333.1 vs. uniprot
Match: A0A418BRF4_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BRF4_9STRA) HSP 1 Score: 205 bits (522), Expect = 4.510e-56 Identity = 116/293 (39.59%), Postives = 175/293 (59.73%), Query Frame = 1 Query: 175 GEVVKDRWRIEERLGKGTFCELHRASDLTHKSEGAAVKVEVQGMQRSVLKWENQVVEGLQSLS-CVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANF-VRRKKNGKEFVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKRHYFDSNFTTNDLV----RTHTIMVVQLLRQCKFLQEPDYKMVEYAIRDIQ 1035
GE++ RWR+ E++G+GTF +++ A DLT+ + AVKVE + VL+WE+QV+ LQ + V +++ GKHG+ +L+MELL G++MS +R QP A G +PL C A+QML+CL+ H+ GYLHRD+K +NF + K+ K + +IDFGL+KQ G R++AEFRGTSMYASL AH D R+DDL S +Y+ LD G+LPWA A++K ++ +K YF L H + +++ L+ + P+Y +V A+R ++
Sbjct: 6 GEILLGRWRVVEKIGEGTFSQIYTAFDLTNPAHKVAVKVEAPSQMKPVLEWESQVLVALQRKNPYVCKYHHHGKHGDNFILIMELL-GDNMSKMR-LQPDATHG---------VPLPKCISAAIQMLDCLEAFHNAGYLHRDIKASNFALSNGKDPKRYFVIDFGLSKQHLDPQGLPIPPRDKAEFRGTSMYASLAAHRREDLGRRDDLWSWMYLVLDFIRGELPWAHDAQKKNREVVVALK-EYFTETHPEQMLEGLPGARHLLAIMEHLKGLSYFDAPNYALVRKAVRAVE 286
BLAST of mRNA_E-siliculosus-1a_F_contig1046.333.1 vs. uniprot
Match: A0A1V9ZFL9_9STRA (Tau-tubulin kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFL9_9STRA) HSP 1 Score: 202 bits (515), Expect = 5.450e-56 Identity = 122/322 (37.89%), Postives = 185/322 (57.45%), Query Frame = 1 Query: 160 SMLKRGEVVKDRWRIEERLGKGTFCELHRASDLTHKSEGAAVKVEVQGMQRSVLKWENQVVEGLQSLS-CVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNG----KEFVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKRHYFDSNFTTNDLV-----RTHTIMVVQLLRQCKFLQEPDYKMVEYAIRDIQANLTQGEKDEEEAFL--WDT 1089
++L GEV+ RW++ E++G+GTF ++ A DLT+ S AVKVE + VL+WE+QV+ LQ S V ++Y GKHG+ +L+MELL G++MS LR A G+PL C +QM++CL+ H G++HRD+K +NF NG K++ IIDFGL+KQ + G + RE+AEFRGTSMYASL AH + R+DDL S Y+ LD G+LPWA A++K ++ E+K +Y + + LV H + + + L ++ P+Y + ++ ++ +KD+EE L WD+
Sbjct: 7 NLLLAGEVLLGRWKVIEKIGEGTFSQIFTAFDLTNTSLKVAVKVEAPSEMKPVLEWESQVLLALQKRSPYVCKYYHHGKHGDNFILIMELL-GDNMSKLRG----------APDATHGVPLAKCVAAGIQMIDCLESFHDAGFIHRDIKASNFAL--SNGPAVNKKYYIIDFGLSKQHLTPEGAVVSAREKAEFRGTSMYASLRAHRREELGRRDDLWSWFYLVLDFIRGELPWAFDAQKKYREVVVELKEYYSEQHLP--QLVDGLPGSRHLLKIAEYLSTLEYADAPNYTFLRKCLKAVE------DKDDEEILLEEWDS 307
BLAST of mRNA_E-siliculosus-1a_F_contig1046.333.1 vs. uniprot
Match: K3WBR9_GLOUD (Protein kinase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBR9_GLOUD) HSP 1 Score: 197 bits (501), Expect = 1.470e-55 Identity = 114/314 (36.31%), Postives = 182/314 (57.96%), Query Frame = 1 Query: 160 SMLKRGEVVKDRWRIEERLGKGTFCELHRASDLTHKSEGAAVKVEVQGMQRSVLKWENQVVEGLQSLSCVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGK---EFVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKRHYFDS--NFTTNDLV-RTHTIMVVQLLRQCKFLQEPDYKMVEYAIRDIQANLTQGEKDEEEAFLW 1083
++L GEV+ +RW+I E++G+GTF +++ A + H+++ AVKVE + VL+WE+ +++ LQ + V R++ GKH VLVMELL GE MS LR P AI G +PL C + L+ML+C++ H GY+HRD+K +NF ++ IIDFGL++Q E + R +AEFRGTSMYASL +H ++ KDDL S Y+ +D G+LPWA A++K ++ +K +Y + + LV +H + +++ L+ K+ +PDY + ++ ++ G K+E+ LW
Sbjct: 7 NILLAGEVIAERWKIVEKIGEGTFSQIYLAYSI-HENQRVAVKVEAPSSLKPVLEWESSILKSLQDCNHVCRYFYHGKHAESTVLVMELL-GESMSMLRVT-PDAIHG---------VPLQRCVSVGLEMLDCIQAFHQHGYVHRDIKASNFAMADAGSPAKGKYYIIDFGLSRQHLGEDKKVIPARPQAEFRGTSMYASLSSHRRQELGPKDDLWSWFYLVMDFMRGELPWATDAQQKNRQTVLNLKEYYTEKCPSLLVEGLVGASHLVAMMKYLQSLKYEDKPDYDFLRRKLKRVET----GSKEEDTMELW 304
BLAST of mRNA_E-siliculosus-1a_F_contig1046.333.1 vs. uniprot
Match: W4FP50_9STRA (CK1/TTBK protein kinase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FP50_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.210e-53 Identity = 118/322 (36.65%), Postives = 178/322 (55.28%), Query Frame = 1 Query: 160 SMLKRGEVVKDRWRIEERLGKGTFCELHRASDLTHKSEGAAVKVEVQGMQRSVLKWENQVVEGLQSLS-CVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKE-------------------------FVIIDFGLAKQFKSESGGMRQERERAEFRGTSMYASLGAHEERDQSRKDDLESLLYVFLDLYTGKLPWAEHARRKEKKETTEMKRHYFDSNFTTNDLV----RTHTIMVVQLLRQCKFLQEPDYKMVEYAIRDIQ 1035
++L GE++ RWR+ E++G+GTF +++ A DLT+ + AVKVE + VL+WE+QV+ LQ + V +++ GKHG+ +L+MELL G++MS +R QP A G +PL C A+QML+CL+ H+ GYLHRD+K +NF NGK+ + +IDFGL+KQ G R++AEFRGTSMYASL AH D R+DDL S +Y+ LD G+LPWA A++K ++ +K YF L H + +++ L+ + P+Y +V A+R ++
Sbjct: 5 NLLLSGEILLGRWRVVEKIGEGTFSQIYTAFDLTNPAHKVAVKVEAPSQMKPVLEWESQVLVALQRKNPYVCKYHHHGKHGDNFILIMELL-GDNMSKMR-LQPDATHG---------VPLPKCISAAIQMLDCLEAFHNAGYLHRDIKASNFAL--SNGKDPKYVHPLVAVFSLLFHLMQIIIIRRYFVIDFGLSKQHLDPQGLPIPPRDKAEFRGTSMYASLAAHRREDLGRRDDLWSWMYLVLDFIRGELPWAHDAQKKNREVVVALK-EYFTETHPEQMLEGLPGARHLLAIMEHLKGLSYFDAPNYALVRKAVRAVE 312 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1046.333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1046.333.1 >prot_E-siliculosus-1a_F_contig1046.333.1 ID=prot_E-siliculosus-1a_F_contig1046.333.1|Name=mRNA_E-siliculosus-1a_F_contig1046.333.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=450bp MIRRPPPLKAAIHDAPPCPPCLCFATPHHPACDACSWLLGRFLWAFVVTAback to top mRNA from alignment at E-siliculosus-1a_F_contig1046:4265..10584+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1046.333.1 ID=mRNA_E-siliculosus-1a_F_contig1046.333.1|Name=mRNA_E-siliculosus-1a_F_contig1046.333.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6320bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1046:4265..10584+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1046:4265..10584+ >mRNA_E-siliculosus-1a_F_contig1046.333.1 ID=mRNA_E-siliculosus-1a_F_contig1046.333.1|Name=mRNA_E-siliculosus-1a_F_contig1046.333.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2700bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1046:4265..10584+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |