mRNA_E-siliculosus-1a_F_contig10438.326.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10438.326.1 vs. uniprot
Match: D7G0R9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R9_ECTSI) HSP 1 Score: 233 bits (594), Expect = 1.600e-74 Identity = 114/141 (80.85%), Postives = 122/141 (86.52%), Query Frame = 1 Query: 385 REHGHALYPPREAPLKDIVTNYSSLTGSNKWLLSSIMLLVFRPVLQSSWSMAKYFKQDFMQTLVSEWREQNAAWEGMLTLVQSESALSFAVRAPSHNDEELKQLHTHALDMVHTSKQVIGRDGVRPSMHSILHYSDAVNNH 807 REHGHALYPPRE PLKDIVTNYSSLTGSNKWLLS IMLLVFR VLQSSWSM KYFKQD ++TL S W Q AWE +L LVQS SALSFAVRAPSHNDEEL+QLH HA DMVH +K+VIG+DGVRPSMHS LHYS+AV NH Sbjct: 8 REHGHALYPPREKPLKDIVTNYSSLTGSNKWLLSPIMLLVFRQVLQSSWSMVKYFKQDLVKTLESNWGNQTGAWEDLLKLVQSASALSFAVRAPSHNDEELQQLHKHAQDMVHVAKEVIGKDGVRPSMHSTLHYSEAVKNH 148
BLAST of mRNA_E-siliculosus-1a_F_contig10438.326.1 vs. uniprot
Match: D7G6M3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M3_ECTSI) HSP 1 Score: 221 bits (562), Expect = 1.040e-67 Identity = 122/242 (50.41%), Postives = 160/242 (66.12%), Query Frame = 1 Query: 1 HPNASTLHPCPYCLVGQFGD-DGGELGSPKYDIESNRRTRGQILRGRRTLAELAPTPAAQATASKELGVAVPVPEQPIWPLHDIVKIDALKATPVESLHADALNVQSLVQSFILTRLNPAGRKLVSAIIREH-GHALYPPREAPLKDIVTNYSSLTGSNKWLLSSIMLLVFRPVLQSSWSMAKYFKQDFMQTLVSEWREQNAAWEGMLTLVQSESALSFAVRAPSHNDEELKQLHTHALDMV 720 HPN+ + PC YC+V Q D +GG+LG YDI +NRRTRG +L GR L LA P Q S LGV P E +W L + I + TPVESLHADALN Q+LVQ +++ LN GR+L+SA +R+ G+ LYPP PLKD V +YSSLTGS+KWLL+SI+LLVFR V ++ +M Y K + LV ++ A + +L LVQ+ S+LSFA+RAPS+ND E++QLH HA DM+ Sbjct: 58 HPNSFSRFPCMYCMVEQTQDNEGGDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQGQLSSALGVVAPQ-EGDVWLLFEACDIVPSRVTPVESLHADALNAQALVQKYLIALLNTKGRELISATMRQRRGNNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVFRAVFHTTATMEMYIKGRELGELVDDYGSMQEARDSLLQLVQAASSLSFALRAPSYNDVEIEQLHKHAQDMI 298
BLAST of mRNA_E-siliculosus-1a_F_contig10438.326.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE) HSP 1 Score: 207 bits (528), Expect = 2.230e-57 Identity = 120/269 (44.61%), Postives = 160/269 (59.48%), Query Frame = 1 Query: 4 PNASTLHPCPYCLVGQFGDD-GGELGSPKYDIESNRRTRGQILRGRRTLAELAPTPAAQATASKELGVAVPVPEQPIWPLHDIVKIDALKATPVESLHADALNVQSLVQSFILTRLNPAGRKLVSAIIREHGHALYPPREAPLKDIVTNYSSLTGSNKWLLSSIMLLVFRPVLQSSWSMAKYFKQDFMQTLVSEWREQNAAWEGMLTLVQSESALSFAVRAPSHNDEELKQLHTHALDMVHTSKQVIGRDGVRPSMHSILHYSDAVNNH 807 PN+ + HPC YC+V Q DD G+LG+P++DI+ +RRT GQI +G L LA P SKELG+ P PL+D +++ + PVE LH DAL L Q F L L+ AGR+LV AI+ + LYPP +KDIVTNY+SLTGS+KW L SIMLLVFR VLQ+ +M + + L +EW E + L+ S LSFA+RAPS + EL+QL A D V +++GR G RP++HSILH + + H Sbjct: 724 PNSWSRHPCAYCMVRQRTDDTSGDLGNPRFDIDKHRRTWGQITKGFEELHGLADDPRELERRSKELGLVEPDASGLPLPLYDAMRVVPTENVPVERLHFDALGQSQLCQIFFLEMLSTAGRRLVGAIMAQKPSLLYPPGTGKIKDIVTNYASLTGSDKWTLQSIMLLVFRMVLQNVPAMRRNMNTREINGLKAEWGTYEGLLEALRELMIRSSLLSFALRAPSFTEPELRQLDKLARDAVEAFSKIMGRTGSRPTIHSILHTVETIRLH 992
BLAST of mRNA_E-siliculosus-1a_F_contig10438.326.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE) HSP 1 Score: 204 bits (519), Expect = 7.520e-57 Identity = 121/271 (44.65%), Postives = 163/271 (60.15%), Query Frame = 1 Query: 4 PNASTLHPCPYCLVGQFGDD-GGELGSPKYDIESNRRTRGQILRGRRTLAELAPTPAAQATASKELGVAVPVPEQPIWPLHDIVKIDALKATPVESLHADALNVQSLVQSFILTRLNPAGRKLVSAIIREHGHALYPPREAPLKDIVTNYSSLTGSNKWLLSSIMLLVFRPVLQSSWSMAKYFKQDFMQTLVSEWREQNAAWEGMLTLVQSESALSFAVRAPSHNDEELKQLHTHALDM--VHTSKQVIGRDGVRPSMHSILHYSDAVNNH 807 PN + PC YC+V D+ GG++G+P++DI+ +RRT G+ + G L LA P Q SKELG+ P PL+ ++I PVE LH DAL L Q F L L+ GR+LVSAI+ + LYPP LKDI+T+Y SLTGS+KW L SIMLLVFR VLQ SM + K+ M+ +EW + + + TL+Q S LSFA+RAPS+ND+EL+QL A D V Q++GR G RP++HS+LH +A+ H Sbjct: 156 PNNFSKFPCSYCMVSHGDDETGGDVGNPQFDIDKHRRTSGRTMDGFSELEALADDPLQQEERSKELGLVAPNASGLKLPLYHAMRIVPGDHVPVERLHFDALGQCQLCQVFCLELLSKKGRRLVSAIMAQKSSLLYPPGTDKLKDILTDYPSLTGSDKWTLQSIMLLVFRVVLQDIPSMRRNMKKRDMKAFKAEWGTYESVLDALRTLIQMVSLLSFALRAPSYNDKELRQLDNLARDAPGVGAFSQMMGRTGSRPTIHSMLHAVEAIRLH 426
BLAST of mRNA_E-siliculosus-1a_F_contig10438.326.1 vs. uniprot
Match: A0A6H5KDY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDY2_9PHAE) HSP 1 Score: 189 bits (480), Expect = 9.650e-56 Identity = 108/238 (45.38%), Postives = 144/238 (60.50%), Query Frame = 1 Query: 4 PNASTLHPCPYCLVGQFGDD-GGELGSPKYDIESNRRTRGQILRGRRTLAELAPTPAAQATASKELGVAVPVPEQPIWPLHDIVKIDALKATPVESLHADALNVQSLVQSFILTRLNPAGRKLVSAIIREHGHALYPPREAPLKDIVTNYSSLTGSNKWLLSSIMLLVFRPVLQSSWSMAKYFKQDFMQTLVSEWREQNAAWEGMLTLVQSESALSFAVRAPSHNDEELKQLHTHALD 714 PN+ + HPC YC+V Q DD GG+LG+P++DI+ +RRT GQI G L LA P Q S++LG+ P P PL+ ++I + PVE LH DAL Q F L L+ GR+LVSAI+ + LYPP LKD+VTNY+SL GS+KW L SI+LL+FR VLQ +M + K ++ LV+EW + E + L++ S LSFA+RAPS D EL+QL A D Sbjct: 17 PNSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSDLDALADVPREQDRRSRDLGLVPPDPSGLPLPLYTAMRIVPTENVPVERLHFDALGQSQFCQVFYLEMLSTTGRRLVSAIMAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAMRRNMKTREIKDLVTEWGTYDKVLEALRELMKRASLLSFALRAPSFTDPELRQLDKLARD 254
BLAST of mRNA_E-siliculosus-1a_F_contig10438.326.1 vs. uniprot
Match: A0A6H5KU21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU21_9PHAE) HSP 1 Score: 188 bits (477), Expect = 2.460e-53 Identity = 108/238 (45.38%), Postives = 144/238 (60.50%), Query Frame = 1 Query: 4 PNASTLHPCPYCLVGQFGDD-GGELGSPKYDIESNRRTRGQILRGRRTLAELAPTPAAQATASKELGVAVPVPEQPIWPLHDIVKIDALKATPVESLHADALNVQSLVQSFILTRLNPAGRKLVSAIIREHGHALYPPREAPLKDIVTNYSSLTGSNKWLLSSIMLLVFRPVLQSSWSMAKYFKQDFMQTLVSEWREQNAAWEGMLTLVQSESALSFAVRAPSHNDEELKQLHTHALD 714 PN+ + HPC YC+V Q DD GG+LG+P++DI+ +RRT GQI G L LA P Q S++LG+ P PL+ ++I + PVE LH DAL L Q F L L+ GR+LVSAI+ + LYPP LKD+VTNY+SL GS+KW L SI+LL+FR VLQ +M + K ++ LV+EW + E + L++ S LSFA+RAPS D EL+QL A D Sbjct: 204 PNSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVPVERLHFDALGQSQLCQVFFLEMLSTTGRRLVSAIMAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAMRRNMKTREIKDLVTEWGTYDKVLEALRELMKRASLLSFALRAPSFTDPELRQLDKLARD 441
BLAST of mRNA_E-siliculosus-1a_F_contig10438.326.1 vs. uniprot
Match: D7G2D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D4_ECTSI) HSP 1 Score: 188 bits (477), Expect = 7.120e-53 Identity = 113/239 (47.28%), Postives = 142/239 (59.41%), Query Frame = 1 Query: 7 NASTLHPCPYCLVGQFGDD-GGELGSPKYDIESNRRTRGQILRGRRTLAELAPTPAAQATASKELGVAVPVPEQPIWPLHDIVKIDALKATPVESLHADALNVQSLVQSFILTRLNPAGRKLVSAIIREHGHALYPPREAPLKDIVTNYSSLTGSNKWLLSSIMLLVFRPVLQSSWSMAKYFKQDFMQTLVSEWREQNAAWEGMLTLVQSESALSFAVRAPSHNDEELKQLHTHALDMV 720 N + PCPYC+V Q D GG+LG +YD+++NRRT G I G TL L+ P+ Q+ S ELG+ P PL+D + I +A PVE LH DAL L Q F+L L+ GR+LVSA++ + LYP LKD+V+NYSSLTGS+KW L SIMLLVFRPV Q +M K K+ + L W E + LVQ S LS+AVRAPSHND EL QL A D+V Sbjct: 249 NHFSRFPCPYCMVEQRDDAFGGDLGDAQYDLDANRRTWGGITEGFATLQSLSDDPSEQSRRSMELGLVAPDGTGLPLPLYDAMLIVPTEAVPVERLHFDALGSCQLCQVFLLEMLSTRGRRLVSAVMSQTPSLLYPAGTERLKDMVSNYSSLTGSDKWTLQSIMLLVFRPVFQDFRAMKKNMKRQNINDLREIWGTDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVV 487
BLAST of mRNA_E-siliculosus-1a_F_contig10438.326.1 vs. uniprot
Match: A0A6H5KQX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX1_9PHAE) HSP 1 Score: 188 bits (477), Expect = 4.810e-52 Identity = 108/238 (45.38%), Postives = 144/238 (60.50%), Query Frame = 1 Query: 4 PNASTLHPCPYCLVGQFGDD-GGELGSPKYDIESNRRTRGQILRGRRTLAELAPTPAAQATASKELGVAVPVPEQPIWPLHDIVKIDALKATPVESLHADALNVQSLVQSFILTRLNPAGRKLVSAIIREHGHALYPPREAPLKDIVTNYSSLTGSNKWLLSSIMLLVFRPVLQSSWSMAKYFKQDFMQTLVSEWREQNAAWEGMLTLVQSESALSFAVRAPSHNDEELKQLHTHALD 714 PN+ + HPC YC+V Q DD GG+LG+P++DI+ +RRT GQI G L LA P Q S++LG+ P PL+ ++I + PVE LH DAL L Q F L L+ GR+LVSAI+ + LYPP LKD+VTNY+SL GS+KW L SI+LL+FR VLQ +M + K ++ LV+EW + E + L++ S LSFA+RAPS D EL+QL A D Sbjct: 348 PNSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVPVERLHFDALGQSQLCQVFFLEMLSTTGRRLVSAIMAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAMRRNMKTREIKDLVTEWGTYDKVLEALRELMKRASLLSFALRAPSFTDPELRQLDKLARD 585
BLAST of mRNA_E-siliculosus-1a_F_contig10438.326.1 vs. uniprot
Match: A0A6H5JWQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ6_9PHAE) HSP 1 Score: 183 bits (465), Expect = 6.260e-50 Identity = 120/279 (43.01%), Postives = 154/279 (55.20%), Query Frame = 1 Query: 1 HPNASTLHPCPYCLVGQFG--DDGGELGSPKYDIESNRRTRGQILRGRRTLAELAPTPAAQATASKELGVAVP------VPEQPIWPLHDIVKIDALKATPVESLHADALNVQSLVQSFILTRLNPAGRKLVSA--IIREHGHALYPPREAPLKDIVTNYSSLTGSNKWLLSSIMLLVFRPVLQSSWSMAKYFKQDFMQTLVSEWREQNAAWEGMLTLVQSESALSFAVRAPSHNDEELKQLHTHALDMVHTSKQVIGRDGVRPSMHSILHYSDAVNNH 807 HPN ST PCPYC Q G+LG+ +YD+E+NRRT G+ G R L L P Q S ELG+ P V +P+W D V I+ + PVESLHADAL + V + + P R + I G LYPP APLKDI TNYSSL GS+KWLL SI+LLV R VL + ++ +Y K +Q L W + A + L+Q SAL+FAVR+PS E K+L HA D V +++GR GVR ++HS LHY A+ H Sbjct: 275 HPNNSTKLPCPYCKADQEERLPTCGDLGNARYDVEANRRTWGEAQDGWRELQALDLAPNEQTKRSAELGIMAPTGVSGGVLGRPLW---DKVFINPARHVPVESLHADALTAGAGVGAGFFS--GPPERSWPGSEFSILWQGSTLYPPATAPLKDICTNYSSLKGSDKWLLGSILLLVSRCVLHDATALKEYVKPRELQALKDTWGGEQAVLAQLRKLLQVASALTFAVRSPSFYKAERKKLMEHARDTVGVYAELLGRGGVRTTVHSALHYVQAIEEH 548
BLAST of mRNA_E-siliculosus-1a_F_contig10438.326.1 vs. uniprot
Match: A0A6H5KXT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT2_9PHAE) HSP 1 Score: 171 bits (433), Expect = 9.710e-49 Identity = 113/257 (43.97%), Postives = 145/257 (56.42%), Query Frame = 1 Query: 40 LVGQFGDD-GGELGSPKYDIESNRRTRGQILRGRRTLAELAPTPAAQATASKELGVAVPVPEQPIWPLHDIVKIDALKATPVESLHADALNVQSLVQSFILTRLNPAGRKLVSAIIREHGHALYPPREAPLKDIVTNYSSLTGSNKWLLSSIMLLVFRPVLQSSWSMAKYFKQDFMQTLVSEWREQNAAWEGMLTLVQSESALSFAVRAPSHNDEELKQLHTHALDMVHTSKQVIGRDGVRPSMHSILHYSDAVNNH 807 +V Q DD G+LG+P +DI +RR GQI G L LA Q SKELG+ P PL+ ++I + PVE LH DAL L Q F L L+ A R+LVSAI+ + LYPP LKDIVTNY+SLTGS+KW L SIMLLVFR VLQ+ +M + L +EW E + L++ S LS A+RAPS + EL QL A D V +++GR G RP++HSILH +A+ H Sbjct: 1 MVRQQNDDTSGDLGNPNFDIGKHRRAWGQITEGLSELDALADL-REQDRRSKELGLVAPDASGLPLPLYTAMRIVPTEHVPVERLHFDALGQSQLCQVFFLEMLSTAARQLVSAIMAQKPPLLYPPGTEKLKDIVTNYTSLTGSDKWTLQSIMLLVFRMVLQNVPAMTREIND-----LKAEWGTYEDVLEALRELLKRASLLSIALRAPSFTEPELLQLDKLARDAVGAFFKIMGRTGSRPTIHSILHTVEAIRLH 251 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10438.326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10438.326.1 >prot_E-siliculosus-1a_F_contig10438.326.1 ID=prot_E-siliculosus-1a_F_contig10438.326.1|Name=mRNA_E-siliculosus-1a_F_contig10438.326.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=269bp HPNASTLHPCPYCLVGQFGDDGGELGSPKYDIESNRRTRGQILRGRRTLAback to top mRNA from alignment at E-siliculosus-1a_F_contig10438:836..2493- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10438.326.1 ID=mRNA_E-siliculosus-1a_F_contig10438.326.1|Name=mRNA_E-siliculosus-1a_F_contig10438.326.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1658bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10438:836..2493- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10438:836..2493- >mRNA_E-siliculosus-1a_F_contig10438.326.1 ID=mRNA_E-siliculosus-1a_F_contig10438.326.1|Name=mRNA_E-siliculosus-1a_F_contig10438.326.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1614bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10438:836..2493- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |