Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1043.325.1 vs. uniprot
Match:
A0A6H5KIW5_9PHAE (Aqp protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIW5_9PHAE)
HSP 1 Score: 187 bits (475), Expect = 1.120e-57
Identity = 91/96 (94.79%), Postives = 92/96 (95.83%), Query Frame = 1
Query: 1 FGAEVLCTFVLVVTVFAACDGELGRKNAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWSDHWCVVFWVGPLLGGVLATVTWE 288
FGAEVLCTF+LVVTVFAACDGELGRK AHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEW DHW VFWVGPLLGGVLATVTWE
Sbjct: 164 FGAEVLCTFLLVVTVFAACDGELGRKTAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWGDHW--VFWVGPLLGGVLATVTWE 257
BLAST of mRNA_E-siliculosus-1a_F_contig1043.325.1 vs. uniprot
Match:
D8LTV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV4_ECTSI)
HSP 1 Score: 179 bits (453), Expect = 2.520e-54
Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 1
Query: 1 FGAEVLCTFVLVVTVFAACDGELGRKNAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWSDHWCVVFWVGPLLGGVLATVTWE 288
FGAEVLCTF+LVVTVF ACDGELGRKNAHTGPLLPLVIGMAVL+AHLVLIPIDG SINPARSFATAV NN+W DHW VFWVGPLLGGVL T TWE
Sbjct: 159 FGAEVLCTFLLVVTVFTACDGELGRKNAHTGPLLPLVIGMAVLIAHLVLIPIDGCSINPARSFATAVINNKWDDHW--VFWVGPLLGGVLGTATWE 252
BLAST of mRNA_E-siliculosus-1a_F_contig1043.325.1 vs. uniprot
Match:
A0A6H5JZJ3_9PHAE (Aqp protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ3_9PHAE)
HSP 1 Score: 179 bits (453), Expect = 6.470e-52
Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 1
Query: 1 FGAEVLCTFVLVVTVFAACDGELGRKNAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWSDHWCVVFWVGPLLGGVLATVTWE 288
FGAEVLCTF+LVVTVF ACDGELGRKNAHTGPLLPLVIGMAVL+AHLVLIPIDG SINPARSFATAV NN+W DHW VFWVGPLLGGVL T TWE
Sbjct: 399 FGAEVLCTFLLVVTVFTACDGELGRKNAHTGPLLPLVIGMAVLIAHLVLIPIDGCSINPARSFATAVINNKWDDHW--VFWVGPLLGGVLGTATWE 492
BLAST of mRNA_E-siliculosus-1a_F_contig1043.325.1 vs. uniprot
Match:
A0A835YY46_9STRA (Aquaporin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY46_9STRA)
HSP 1 Score: 109 bits (273), Expect = 3.520e-27
Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 1
Query: 4 GAEVLCTFVLVVTVFAACDGELGRKNAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWSDHWCVVFWVGPLLGGVLATVTWE 288
G E+LCT++LV V A + L + H LLP VIGM V+L H L+P+DG SINPARSF +A+ N W DHW VFW+GPL+G +AT+ +E
Sbjct: 162 GGEILCTWLLVTVVLCATNPGLQKAYVHQAVLLPWVIGMTVMLCHFTLVPVDGCSINPARSFGSAIITNTWKDHW--VFWLGPLIGATIATLLFE 254
BLAST of mRNA_E-siliculosus-1a_F_contig1043.325.1 vs. uniprot
Match:
A0A7J7QRE8_9CHLO (Plasma membrane intrinsic protein n=2 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QRE8_9CHLO)
HSP 1 Score: 106 bits (264), Expect = 5.350e-26
Identity = 50/95 (52.63%), Postives = 63/95 (66.32%), Query Frame = 1
Query: 4 GAEVLCTFVLVVTVFAACDGELGRKNAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWSDHWCVVFWVGPLLGGVLATVTWE 288
GAE++ T + V VFAA D G +AH L PL IG+ V LAH+V IPIDG S+NPARSF TAV + W HW +FWVGP++GG A + +E
Sbjct: 153 GAELILTAIFVFVVFAAVDQTRGANSAHLPVLAPLAIGIVVFLAHVVAIPIDGCSVNPARSFGTAVVSRTWQHHW--IFWVGPIVGGAAAGLLYE 245
BLAST of mRNA_E-siliculosus-1a_F_contig1043.325.1 vs. uniprot
Match:
A0A8J9WPI2_9CHLO (Aquaporin PIP2-5 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WPI2_9CHLO)
HSP 1 Score: 103 bits (258), Expect = 7.710e-25
Identity = 51/96 (53.12%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 1 FGAEVLCTFVLVVTVFAACDGELGRKNAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWSDHWCVVFWVGPLLGGVLATVTWE 288
+G E + T LV TVFAA D E AH L P IGM V L HLV IP+DG SINPARSF A +W D W VFWVGPL G V+A +E
Sbjct: 168 WGLETILTMALVFTVFAATDAERASDTAHLPVLAPFAIGMVVFLCHLVAIPLDGCSINPARSFGAAAVAGKWDDQW--VFWVGPLCGAVMAATAYE 261
BLAST of mRNA_E-siliculosus-1a_F_contig1043.325.1 vs. uniprot
Match:
A0A383VLF8_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VLF8_TETOB)
HSP 1 Score: 103 bits (256), Expect = 1.020e-24
Identity = 48/95 (50.53%), Postives = 62/95 (65.26%), Query Frame = 1
Query: 4 GAEVLCTFVLVVTVFAACDGELGRKNAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWSDHWCVVFWVGPLLGGVLATVTWE 288
G E++ T + V VFAA D + G +AH L PL IG+ V L HLV +PIDG S+NPARSF TAV W+ HW +FWVGP++GG A + +E
Sbjct: 165 GVELILTAIFVFIVFAAVDKKRGAHSAHMPVLAPLAIGIVVFLCHLVAVPIDGCSVNPARSFGTAVVARTWAHHW--IFWVGPIVGGAAAGLLYE 257
BLAST of mRNA_E-siliculosus-1a_F_contig1043.325.1 vs. uniprot
Match:
I0ZAA7_COCSC (Plasma membrane intrinsic protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0ZAA7_COCSC)
HSP 1 Score: 102 bits (255), Expect = 2.160e-24
Identity = 51/96 (53.12%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 1 FGAEVLCTFVLVVTVFAACDGELGRKNAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWSDHWCVVFWVGPLLGGVLATVTWE 288
+G E + T LV TVFAA D E AH L P IGM V L HLV IP+DG SINPARSF A + W + W VFWVGPL G VLA +E
Sbjct: 169 WGLETILTMALVFTVFAATDSERATDTAHLPVLAPFAIGMVVFLCHLVAIPLDGCSINPARSFGAAAVSGSWDNQW--VFWVGPLSGAVLAAAIYE 262
BLAST of mRNA_E-siliculosus-1a_F_contig1043.325.1 vs. uniprot
Match:
A0A103Y9I5_CYNCS (Aquaporin-like protein n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103Y9I5_CYNCS)
HSP 1 Score: 100 bits (249), Expect = 9.180e-24
Identity = 51/93 (54.84%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 4 GAEVLCTFVLVVTVFAACDGELGRKNAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNE---WSDHWCVVFWVGPLLGGVLA 273
GAE++ TFVLV TVF+A D E ++AH L PL IG AV + HL IPI G SINPARSF TAV N+ W D W +FWVGP +G +A
Sbjct: 167 GAEIIGTFVLVYTVFSATDPERKARDAHIPVLAPLAIGFAVFMVHLATIPITGTSINPARSFGTAVIYNKEKAWDDQW--IFWVGPFIGAAIA 257
BLAST of mRNA_E-siliculosus-1a_F_contig1043.325.1 vs. uniprot
Match:
D8TFR1_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8TFR1_SELML)
HSP 1 Score: 100 bits (249), Expect = 1.000e-23
Identity = 50/95 (52.63%), Postives = 65/95 (68.42%), Query Frame = 1
Query: 4 GAEVLCTFVLVVTVFAACDGELGRKNAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNE---WSDHWCVVFWVGPLLGGVLATV 279
GAE++ TFVL TVF+A D + +++H L PL IG AV + HL L+P+ G+S+NPARSFATAV N W+D W V+WVGPLLG LA +
Sbjct: 167 GAEIIGTFVLAYTVFSATDPKRVARDSHVPVLAPLPIGFAVFMVHLALLPVTGSSVNPARSFATAVIYNNSRVWNDQW--VYWVGPLLGAALAAM 259
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1043.325.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 1.12e-57 / Id = 94.79 Expect = 2.52e-54 / Id = 88.54 Expect = 6.47e-52 / Id = 88.54 Expect = 3.52e-27 / Id = 51.58 Expect = 5.35e-26 / Id = 52.63 Expect = 7.71e-25 / Id = 53.13 Expect = 1.02e-24 / Id = 50.53 Expect = 2.16e-24 / Id = 53.13 Expect = 9.18e-24 / Id = 54.84 Expect = 1.00e-23 / Id = 52.63 Sequence A0A6H5KIW5_9PHAE D8LTV4_ECTSI A0A6H5JZJ3_9PHAE A0A835YY46_9STRA A0A7J7QRE8_9CHLO A0A8J9WPI2_9CHLO A0A383VLF8_TETOB I0ZAA7_COCSC A0A103Y9I5_CYNCS D8TFR1_SELML Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 0 Stop 0 Cds size 288 Model size 288 Exons 3 Hectar predicted targeting category signal peptide BRITE ko00000,ko00001,ko02000,ko04147 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. U EggNOG OGs COG0580@1,KOG0223@2759 EggNOG free text desc. water channel activity GOs GO:0000003,GO:0000302,GO:0000323,GO:0001101,GO:0001568,GO:0001654,GO:0001655,GO:0001656,GO:0001666,GO:0001822,GO:0001944,GO:0002088,GO:0002237,GO:0002790,GO:0003008,GO:0003014,GO:0003091,GO:0003094,GO:0003097,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003779,GO:0005102,GO:0005198,GO:0005212,GO:0005215,GO:0005216,GO:0005217,GO:0005221,GO:0005223,GO:0005253,GO:0005261,GO:0005267,GO:0005326,GO:0005372,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005739,GO:0005764,GO:0005768,GO:0005769,GO:0005773,GO:0005783,GO:0005791,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0005887,GO:0005901,GO:0005902,GO:0005903,GO:0005911,GO:0006139,GO:0006163,GO:0006164,GO:0006182,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006820,GO:0006833,GO:0006836,GO:0006855,GO:0006869,GO:0006884,GO:0006915,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0006996,GO:0007010,GO:0007015,GO:0007154,GO:0007163,GO:0007267,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007565,GO:0007568,GO:0007586,GO:0007588,GO:0007589,GO:0007600,GO:0007601,GO:0008092,GO:0008150,GO:0008152,GO:0008154,GO:0008219,GO:0008284,GO:0008324,GO:0008361,GO:0008509,GO:0008519,GO:0008643,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009314,GO:0009410,GO:0009411,GO:0009414,GO:0009415,GO:0009416,GO:0009506,GO:0009507,GO:0009526,GO:0009536,GO:0009605,GO:0009607,GO:0009611,GO:0009612,GO:0009617,GO:0009624,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009887,GO:0009888,GO:0009892,GO:0009914,GO:0009925,GO:0009941,GO:0009987,GO:0009991,GO:0010008,GO:0010015,GO:0010033,GO:0010035,GO:0010038,GO:0010053,GO:0010054,GO:0010226,GO:0010243,GO:0010256,GO:0010466,GO:0010496,GO:0010591,GO:0010592,GO:0010605,GO:0010632,GO:0010634,GO:0010817,GO:0010876,GO:0010941,GO:0010951,GO:0010959,GO:0012501,GO:0012505,GO:0012506,GO:0014070,GO:0014074,GO:0015075,GO:0015077,GO:0015079,GO:0015103,GO:0015112,GO:0015144,GO:0015166,GO:0015168,GO:0015238,GO:0015250,GO:0015267,GO:0015276,GO:0015318,GO:0015669,GO:0015670,GO:0015672,GO:0015696,GO:0015698,GO:0015701,GO:0015706,GO:0015711,GO:0015718,GO:0015721,GO:0015722,GO:0015791,GO:0015793,GO:0015833,GO:0015849,GO:0015850,GO:0015893,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016050,GO:0016323,GO:0016324,GO:0018130,GO:0018995,GO:0019222,GO:0019233,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019755,GO:0019899,GO:0019904,GO:0020003,GO:0021537,GO:0021591,GO:0021670,GO:0021700,GO:0022411,GO:0022414,GO:0022600,GO:0022603,GO:0022607,GO:0022622,GO:0022803,GO:0022834,GO:0022836,GO:0022838,GO:0022839,GO:0022857,GO:0022890,GO:0023052,GO:0023061,GO:0030001,GO:0030029,GO:0030036,GO:0030042,GO:0030054,GO:0030072,GO:0030104,GO:0030133,GO:0030135,GO:0030136,GO:0030141,GO:0030154,GO:0030155,GO:0030157,GO:0030162,GO:0030165,GO:0030184,GO:0030185,GO:0030334,GO:0030335,GO:0030424,GO:0030430,GO:0030658,GO:0030659,GO:0030667,GO:0030900,GO:0030950,GO:0030952,GO:0031045,GO:0031090,GO:0031224,GO:0031225,GO:0031226,GO:0031253,GO:0031300,GO:0031301,GO:0031302,GO:0031303,GO:0031323,GO:0031324,GO:0031344,GO:0031346,GO:0031410,GO:0031526,GO:0031625,GO:0031667,GO:0031668,GO:0031960,GO:0031965,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0032127,GO:0032268,GO:0032269,GO:0032496,GO:0032501,GO:0032502,GO:0032526,GO:0032535,GO:0032809,GO:0032835,GO:0032870,GO:0032879,GO:0032940,GO:0032941,GO:0032984,GO:0032991,GO:0033036,GO:0033267,GO:0033326,GO:0033363,GO:0033554,GO:0033643,GO:0033646,GO:0033655,GO:0033762,GO:0033993,GO:0034219,GO:0034220,GO:0034599,GO:0034614,GO:0034641,GO:0034644,GO:0034654,GO:0035295,GO:0035377,GO:0035378,GO:0035379,GO:0035690,GO:0035821,GO:0036293,GO:0036294,GO:0036477,GO:0040007,GO:0040012,GO:0040017,GO:0042044,GO:0042045,GO:0042060,GO:0042127,GO:0042221,GO:0042383,GO:0042476,GO:0042493,GO:0042538,GO:0042542,GO:0042592,GO:0042594,GO:0042631,GO:0042802,GO:0042886,GO:0042891,GO:0042981,GO:0042995,GO:0043005,GO:0043010,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043230,GO:0043231,GO:0043269,GO:0043270,GO:0043281,GO:0043434,GO:0043624,GO:0043627,GO:0043656,GO:0043657,GO:0043679,GO:0043855,GO:0043933,GO:0044057,GO:0044058,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044241,GO:0044249,GO:0044271,GO:0044281,GO:0044297,GO:0044298,GO:0044306,GO:0044389,GO:0044403,GO:0044419,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044434,GO:0044435,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0044853,GO:0045121,GO:0045177,GO:0045178,GO:0045202,GO:0045765,GO:0045766,GO:0045785,GO:0045861,GO:0046068,GO:0046390,GO:0046483,GO:0046541,GO:0046658,GO:0046677,GO:0046683,GO:0046688,GO:0046689,GO:0046691,GO:0046717,GO:0046873,GO:0046875,GO:0046877,GO:0046878,GO:0046879,GO:0046903,GO:0046942,GO:0048145,GO:0048146,GO:0048364,GO:0048468,GO:0048469,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048588,GO:0048589,GO:0048592,GO:0048593,GO:0048731,GO:0048764,GO:0048765,GO:0048767,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050878,GO:0050886,GO:0050891,GO:0050896,GO:0050953,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051179,GO:0051181,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051259,GO:0051260,GO:0051261,GO:0051262,GO:0051270,GO:0051272,GO:0051289,GO:0051290,GO:0051291,GO:0051336,GO:0051346,GO:0051384,GO:0051458,GO:0051591,GO:0051592,GO:0051702,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0051851,GO:0051924,GO:0051928,GO:0052547,GO:0052548,GO:0052652,GO:0055037,GO:0055038,GO:0055044,GO:0055085,GO:0055086,GO:0060255,GO:0060322,GO:0060429,GO:0060456,GO:0060491,GO:0060548,GO:0060560,GO:0060986,GO:0061326,GO:0061437,GO:0061440,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0065010,GO:0070062,GO:0070293,GO:0070295,GO:0070301,GO:0070382,GO:0070482,GO:0070633,GO:0070887,GO:0071214,GO:0071229,GO:0071236,GO:0071241,GO:0071248,GO:0071260,GO:0071280,GO:0071288,GO:0071300,GO:0071310,GO:0071320,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071453,GO:0071456,GO:0071462,GO:0071466,GO:0071470,GO:0071472,GO:0071474,GO:0071478,GO:0071482,GO:0071495,GO:0071496,GO:0071548,GO:0071549,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071731,GO:0071732,GO:0071804,GO:0071805,GO:0071840,GO:0071944,GO:0072001,GO:0072006,GO:0072009,GO:0072012,GO:0072014,GO:0072019,GO:0072020,GO:0072022,GO:0072032,GO:0072044,GO:0072070,GO:0072073,GO:0072080,GO:0072170,GO:0072205,GO:0072207,GO:0072210,GO:0072220,GO:0072224,GO:0072229,GO:0072230,GO:0072232,GO:0072234,GO:0072236,GO:0072237,GO:0072239,GO:0072243,GO:0072358,GO:0072359,GO:0072488,GO:0072521,GO:0072522,GO:0080090,GO:0080147,GO:0080170,GO:0085018,GO:0090066,GO:0090407,GO:0090558,GO:0090596,GO:0090627,GO:0097159,GO:0097205,GO:0097237,GO:0097305,GO:0097327,GO:0097366,GO:0097435,GO:0097458,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:0098791,GO:0098793,GO:0098805,GO:0098857,GO:0098858,GO:0098862,GO:0099094,GO:0099402,GO:0099503,GO:0104004,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0120038,GO:0150034,GO:1901135,GO:1901137,GO:1901293,GO:1901342,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901618,GO:1901652,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1902743,GO:1902745,GO:1903561,GO:1904018,GO:1905392,GO:1990349,GO:2000026,GO:2000116,GO:2000117,GO:2000145,GO:2000147 KEGG Pathway ko04924,ko04962,ko04964,ko04970,ko04976,map04924,map04962,map04964,map04970,map04976 KEGG TC 1.A.8,1.A.8.11,1.A.8.8 KEGG ko ko:K09863,ko:K09864,ko:K09865,ko:K09866,ko:K09867,ko:K09868,ko:K09872 Preferred name MIP Seed eggNOG ortholog 2880.D8LTV5 Seed ortholog evalue 7.3e-46 Seed ortholog score 189.5 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1043.325.1
>prot_E-siliculosus-1a_F_contig1043.325.1 ID=prot_E-siliculosus-1a_F_contig1043.325.1|Name=mRNA_E-siliculosus-1a_F_contig1043.325.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=96bp
FGAEVLCTFVLVVTVFAACDGELGRKNAHTGPLLPLVIGMAVLLAHLVLI back to top mRNA from alignment at E-siliculosus-1a_F_contig1043:36924..37909-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1043.325.1 ID=mRNA_E-siliculosus-1a_F_contig1043.325.1|Name=mRNA_E-siliculosus-1a_F_contig1043.325.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=986bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1043:36924..37909- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)TTCGGAGCTGAAGTCCTGTGCACCTTCGTGCTGGTGGTGACTGTCTTCGC
CGCCTGCGACGGGGAGCTCGGCCGCAAGAACGCCCACACTGGTCCTCTCC
TTCCACTCGTGATCGGGATGGCTGTTCTCCTAG GTAAGGAGGAGATGATA
TGTTTGAGAGGAGGATAGTTTGTCGCGCTCGTTCGTTCGTGTCTTGATTT
GGGTGCAAGTACGTCTTGCGGCGCAAATCAGGGGCCCGTGGTGTTTGTGG
TCACAAGGGTTGCGGTTGTTGTCGCTTTCCGGAGGAAGGAGTGATTTGCC
TCGTCGATGCGGTCTTTGGTGTGGCATATACCCCTGATACCACGTGGATA
CGCTACGGCACTTGGGTGTGTTGGGCCTGGCTGGGAGCGATTGACCTCCG
GACGGGTGACCTCGCCGAACATCGTTTGTTTGCGCTGAAAGACACCCTGC
CTGCCGCTTCGCTTGCACGGTTCGCTGCTCGCTCACCCTCCCACAGCGCA
CCTGGTGTTGATCCCCATCGACGGCGCCTCCATCAACCCCGCCCGCTCTT
TCGCCACGGCCGTTACGAACAACGAGTGGAGCGACCACTGGTGCGT GTGC
CCTCTCGATGTTGATGCTTGCGTTGTTGTCTGCTTGGGGCGGGTGACGTT
TCCTGTTGCTCTCGTTCTAAGGGGATAATAGAGTGCTTCCAACTCTACTC
TGGCGGGACCCCAAGCACATTTTGTCTTGCGGCTGTAGTCGTCTCATGGA
CATGGATCACACGTCGGCTGGTGCGGGGAGCACGTTGCGTGTCTCTCTCT
TGACCTCCCAATTTTATTCAAAACATCAACTACCCAAGATTTTCTGAGTC
TCGAAAACCAACCAACGCTCGAAACCTGTTTCATCTCCACATTGTGTCCC
CCCTCCCCCAAAATGCGTCTTTAATTTTCAGGGTATTCTGGGTCGGTCCC
CTCCTCGGCGGTGTCCTCGCGACTGTCACTTGGGAA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1043:36924..37909-
>mRNA_E-siliculosus-1a_F_contig1043.325.1 ID=mRNA_E-siliculosus-1a_F_contig1043.325.1|Name=mRNA_E-siliculosus-1a_F_contig1043.325.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=576bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1043:36924..37909- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top