Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Start | 1 |
Stop | 1 |
Cds size | 204 |
Model size | 204 |
Exons | 2 |
Ec32 ortholog | Ec-05_006080.1 |
Ec32 ortholog description | Hypothetical protein |
Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig104.311.1 >prot_E-siliculosus-1a_F_contig104.311.1 ID=prot_E-siliculosus-1a_F_contig104.311.1|Name=mRNA_E-siliculosus-1a_F_contig104.311.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=68bp
MLCHNVSQVCLPCHFFGYVPPSKEVAEIIGGKRSVVLPEPTLSERIGTAK ATTTKVGGGRALALATT* back to topmRNA from alignment at E-siliculosus-1a_F_contig104:60795..61618+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig104.311.1 ID=mRNA_E-siliculosus-1a_F_contig104.311.1|Name=mRNA_E-siliculosus-1a_F_contig104.311.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=824bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig104:60795..61618+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) ATGCTGTGCCATAACGTTTCACAGGTGTGCCTGCCTTGCCACTTCTTCGG
GTATGTTCCCCCCTCAAAGGAAGTCGCAGAGGTGAGCAATGCGTGCACTT
CGCACCGCCTGCTTCACGAGGTATTGCCACAAAACGTCTTTTAACAAATC
GCTTGGTGACGACGGCGTAGCGTGGTTGGTTGGTTAGTTGGTTGTGGTTG
TGGTTGTGGTGGTTGCTTTTGTCATTGTGTTGTTTGCACACAAAACTTCG
TGTTCGGGTGTTTTCCAAGTCCATCTCTTCCCTGCTCTTCGATGCAACTA
TTCGATCCCCGCTTTTTCAAGCTATCGCAGCCCTAAACAAGGTCGAAGAC
CAATAGGAACGCATTCCCACTGCTCGCGAAGAATTCAGAGCTGCGTGATT
CATCGTTGCATCATGTTGCTACAGAGGCCAGCAGAGGTACCACTGACTGG
TAAACTCAACGATGGCCTAGTCGGGAACAAGTGGCGTGATTCGAAAATTT
CTAAGAAAAAGTGATCACATTGAAACTATGGTTCCGGCCCGATGTTGAAA
ACAGTTTGGCAGGATTCTGATGTTTCGCCGTCAGGGTCGCCAGATAATAT
GTACGTATCATGCATCCCTACATAGCTCTTTCCGACCAACGCGATTCGGG
AGTGACAGAGACGGAACTTACACGCAACACGTCGCCTTACCACCTGCTCA
GATTATTGGAGGCAAGCGATCGGTGGTGTTGCCGGAACCAACTCTTTCGG
AGCGGATAGGGACGGCAAAGGCTACCACAACCAAGGTTGGTGGCGGCAGA
GCCTTAGCACTGGCCACCACGTAA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig104:60795..61618+ >mRNA_E-siliculosus-1a_F_contig104.311.1 ID=mRNA_E-siliculosus-1a_F_contig104.311.1|Name=mRNA_E-siliculosus-1a_F_contig104.311.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=408bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig104:60795..61618+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) ATGCTGTGCCATAACGTTTCACAGGTGTGCCTGCCTTGCCACTTCTTCGG GTATGTTCCCCCCTCAAAGGAAGTCGCAGAGATGCTGTGCCATAACGTTT CACAGGTGTGCCTGCCTTGCCACTTCTTCGGGTATGTTCCCCCCTCAAAG GAAGTCGCAGAGATTATTGGAGGCAAGCGATCGGTGGTGTTGCCGGAACC AACTCTTTCGGAGCGGATAGGGACGGCAAAGGCTACCACAACCAAGGTTG GTGGCGGCAGAGCCTTAGCACTGGCCACCACGTAAATTATTGGAGGCAAG CGATCGGTGGTGTTGCCGGAACCAACTCTTTCGGAGCGGATAGGGACGGC AAAGGCTACCACAACCAAGGTTGGTGGCGGCAGAGCCTTAGCACTGGCCA CCACGTAA back to top
|