mRNA_E-siliculosus-1a_F_contig1038.295.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1038.295.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE) HSP 1 Score: 843 bits (2178), Expect = 1.950e-296 Identity = 440/702 (62.68%), Postives = 495/702 (70.51%), Query Frame = 1 Query: 4 YDGGDCCECTCVDALYPCGYVGFACIDPAAACVDDDYITAELAESCYYAGGHVSGVGNGYCNESNNIEECDYDGGDCCECTCGDESGDLDDSSCTDFACVDPNAPCVDD-ITEGMFEGCFNFGDGFCDDYNNNEQCGYDGGDCCECTCVVSTGWSTESSCTEFACIDPTSPCADDDDTTADAVESCIIDYLGDGICNTSNNIEICGYDGGDCCECTXXXXXXXVLDGS-CSDFACVDPTASCFDESITVDMFENCDAELLGDGYCQESNNNEICDYDFGDCCESTCGVDSSESLDEFACSSFACIDPRFVTQSPTPAPLSLECPGDPSC----------DEGMLESATNQGLIVAGIVTALNLFYLTCCRKDDGADEVHCYLLLMAYVFSVAEGICVILVVPGSKENLKIGAVFLFGAVNALSAFLLRNAGRHVTAAIVNAALEALFATVVLLYFVELSTRNIFLFGALAGNEALVGFAIAARVDSRPNS-------------------DXXXXXXXXXXXXXXXXXXXXXXXXXXATLIQSLFHRHSAWRSDFVFTWWAITGFAITSAVCMCLVPPVNRIALGAKLACLTQFFFRSSTGVMAFVILALTEVNIANPPTFDIVWSSVVGTLGVLGGCSSWLAFKEIQDIPDGHS-------FQASAPELP-GQ*A-----RSLVSIHPRDGERA*DNVPPGA 1977 YDGGDCCECTCVDA YPCGYV FACIDP+AACVDDD ITA++AESC+ GG+V+G+GNGYCNE+NNIEECDYD GDCC+CTCG ES DL D SC DFACVDPNAPCVDD +TEGMFE CFNFGDGFC+DYNNNEQCGYDGGDCCECTCVV WS E CTEFACIDPT+PC DDDD TADA+E+C+I+YLGDG C+T NN EIC YDGGDCCECT VL GS CSDF C+DPTASCFDESITVDM+E CD ELLGD CQ SNN E+CDYDFGDCCE+TCGVDSS +LDE +CSSFAC+DPRFVT SPTPAPLS EC DP+C D+ E A +G I A IVT +NL YL +K + ADEVHC LL+MAY FSV EGI VI +VP SKE LKIGAV FG V A S +LLR +GR V +I+NA LEALFA VLL+FVE STRNIFLFG +AGNEALVGFAIAARV P AT +QS FHR SAWRS FV TWW I+GFA TSA+CMC +PP+NRIA G KLAC + F S G++AFVIL LTEVNI NPPTFDI WSSV G LGVL + + F+ I+ IPD S + ++P GQ R L S +P GE+ DN P GA Sbjct: 90 YDGGDCCECTCVDAFYPCGYVAFACIDPSAACVDDDNITADIAESCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLSDFSCVDFACVDPNAPCVDDDVTEGMFEDCFNFGDGFCNDYNNNEQCGYDGGDCCECTCVVD--WSAEFGCTEFACIDPTAPCVDDDDVTADALENCMIEYLGDGYCDTYNNNEICDYDGGDCCECTCGSDSTDVLVGSDCSDFVCIDPTASCFDESITVDMYEYCDVELLGDSICQPSNNFEVCDYDFGDCCEATCGVDSSGTLDELSCSSFACVDPRFVTPSPTPAPLSSECLDDPACVDGTRGQSVDDQDTQERAIIEGSIAAFIVTVINLLYLVFHKKGEEADEVHCSLLMMAYAFSVVEGISVIFLVPDSKEKLKIGAVLFFGVVAAGSGYLLRKSGRDVALSILNAVLEALFALFVLLFFVEQSTRNIFLFGIVAGNEALVGFAIAARVGGTPTGGENEAEATTXXXXXXXXXXSQHEAEAKCEITFSLAEALGDMLFPLIATQVQSWFHRDSAWRSGFVLTWWGISGFASTSAICMCFMPPMNRIAFGPKLACKSLIIFNFSQGILAFVILTLTEVNITNPPTFDIAWSSVSGALGVLFALACCILFEHIRHIPDSQSVGVIVSSLKRELEDIPDGQSRWDVVMRVLRSYYP-GGEKVEDNGPSGA 788
BLAST of mRNA_E-siliculosus-1a_F_contig1038.295.1 vs. uniprot
Match: D8LEX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX5_ECTSI) HSP 1 Score: 821 bits (2120), Expect = 1.570e-292 Identity = 442/479 (92.28%), Postives = 456/479 (95.20%), Query Frame = 1 Query: 343 MFEGCFNFGDGFCDDYNNNEQCGYDGGDCCECTCVVSTGWSTESSCTEFACIDPTSPCADDDDTTADAVESCIIDYLGDGICNTSNNIEICGYDGGDCCECTXXXXXXXVLDGSCSDFACVDPTASCFDESITVDMFENCDAELLGDGYCQESNNNEICDYDFGDCCESTCGVDSSESLDEFACSSFACIDPRFVTQSPTPAPLSLECPGDPSCDEGMLESATNQGLIVAGIVTALNLFYLTCCRKDDGADEVHCYLLLMAYVFSVAEGICVILVVPGSKENLKIGAVFLFGAVNALSAFLLRNAGRHVTAAIVNAALEALFATVVLLYFVELSTRNIFLFGALAGNEALVGFAIAARVDSRPNSDXXXXXXXXXXXXXXXXXXXXXXXXXXATLIQSLFHRHSAWRSDFVFTWWAITGFAITSAVCMCLVPPVNRIALGAKLACLTQFFFRSSTGVMAFVILALTEVNIANPPTFDIV 1779 MFEGCFNFGDGFCDDYNNNEQCGYDGGDCCECTCVVST WSTESSCTEFACIDP +PCADDDD TADAVESCIIDYLGDGIC+TSNNIE CGYD GDCCECTXXXXXXX SCSDFACVDP ASCFDESITVDMFENCDAELLGDGYCQESNNNEICDYDFGDCCESTCGVD SESLDEFACSSFACIDPRFVTQSPTPAPLS ECPG PSC+EGMLESATNQGLIVAGIVTALNLFYLTCCRKD GADEVHCYLLLMAYVF+VAEG+CV LVVP SKENLKIGAVFLFGAV+ALSAFLLR AGRHVTAAIVNA LE LFATVVLLYFV+LSTRNIFLFGA+AGNEALVGFAIAARVDSRPNSDXXXXXXXXXXXXXXXXXXXXXXXXXXATLIQSLFHR SAWRSDFVFTWW+ITGFA+TSA+CMCLVPPV+R+A GAKLACLTQFFF SSTGVMAFVIL LTEVNIA+PPTFDIV Sbjct: 1 MFEGCFNFGDGFCDDYNNNEQCGYDGGDCCECTCVVSTLWSTESSCTEFACIDPRAPCADDDDITADAVESCIIDYLGDGICDTSNNIETCGYDSGDCCECTXXXXXXXXXXXSCSDFACVDPMASCFDESITVDMFENCDAELLGDGYCQESNNNEICDYDFGDCCESTCGVDFSESLDEFACSSFACIDPRFVTQSPTPAPLSSECPGGPSCEEGMLESATNQGLIVAGIVTALNLFYLTCCRKDAGADEVHCYLLLMAYVFAVAEGMCVSLVVPNSKENLKIGAVFLFGAVSALSAFLLRKAGRHVTAAIVNAGLEGLFATVVLLYFVQLSTRNIFLFGAIAGNEALVGFAIAARVDSRPNSDXXXXXXXXXXXXXXXXXXXXXXXXXXATLIQSLFHRDSAWRSDFVFTWWSITGFALTSAICMCLVPPVSRVAFGAKLACLTQFFFSSSTGVMAFVILTLTEVNIADPPTFDIV 479
BLAST of mRNA_E-siliculosus-1a_F_contig1038.295.1 vs. uniprot
Match: A0A6H5L034_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L034_9PHAE) HSP 1 Score: 482 bits (1241), Expect = 3.930e-161 Identity = 297/426 (69.72%), Postives = 313/426 (73.47%), Query Frame = 1 Query: 724 FDESITVDMFENCDAELLGDGYCQESNNNEIC-------DYDFGDCCESTCGVDSSESLDEFACSSFACIDPRFVTQSPTPAPLSLECPGDPSC----------DEGMLESATNQGLIVAGIVTALNLFYLTCCRKDDGADEVHCYLLLMAYVFSVAEGICVILVVPGSKENLKIGAVFLFGAVNALSAFLLRNAGRHVTAAIVNAALEALFATVVLLYFVELSTRNIFLFGALAGNEALVGFAIAARVDSRPNSDXXXXXXXXXXXXXXXXXXXXXXXXXXATLIQSLFHRHSAWRSDFVFTWWAITGFAITSAVCMCLVPPVNRIALGAKLACLTQFFFRSSTGVMAFVILALTEVNIANPPTFDIVWSSVVGTLGVLGGCSSWLAFKEIQDIPDGHSFQASAPELPGQ*ARSLVSIHPRDGER 1950 F SIT DMFENCDAELLG+GYCQ SNNNEIC DYDFGDCCE T G DSSESLDEFACSSFA IDP FVTQSPT APLS ECPG PSC D G+LESATNQG ADEVHCYLLLMA VFSVAEG+C IL+VP SKENLKIGAV LFGAV+ALSAF L NAGRHVTAAIVNA LE LF T L++ + AIAARVDSR XXXXXXXXXXXXXXXXXXXXXXX ATLIQ LFHR AWRS+F FTWWAITGFAITSA+CMCLVPPVNRI GAKLACLTQ+FF SSTGVM+FVI+ LTEVNIA+PPTFDIVWSSVVGTLGVL G SSWLAFK+IQDIPDGHSFQASAP LP Q S + IH DGER Sbjct: 2 FRRSITFDMFENCDAELLGNGYCQGSNNNEICGASTRPSDYDFGDCCEPTYGADSSESLDEFACSSFARIDPWFVTQSPTSAPLSSECPGGPSCVEGAGGPSVDDPGILESATNQG-----------------------ADEVHCYLLLMANVFSVAEGMCDILLVPSSKENLKIGAVPLFGAVSALSAFRLSNAGRHVTAAIVNAVLEGLFPTPWLVFAIA---------------------AIAARVDSRXXXXXXXXXXXXXXXXXXXXXXXXXXXPLVATLIQPLFHRDGAWRSNFAFTWWAITGFAITSAICMCLVPPVNRIVFGAKLACLTQYFFSSSTGVMSFVIVTLTEVNIADPPTFDIVWSSVVGTLGVLSGYSSWLAFKQIQDIPDGHSFQASAPTLPDQ---SFMCIHSGDGER 380
BLAST of mRNA_E-siliculosus-1a_F_contig1038.295.1 vs. uniprot
Match: D7FSR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI) HSP 1 Score: 424 bits (1089), Expect = 7.010e-140 Identity = 200/270 (74.07%), Postives = 222/270 (82.22%), Query Frame = 1 Query: 190 ESNNIEECDYDGGDCCECTCGDESGDLDDSSCTDFACVDPNAPCVDD-ITEGMFEGCFNFGDGFCDDYNNNEQCGYDGGDCCECTCVVSTGWSTESSCTEFACIDPTSPCADDDDTTADAVESCIIDYLGDGICNTSNNIEICGYDGGDCCECTXXXXXXXVLDGSCSDFA-CVDPTASCFDESITVDMFENCDAELLGDGYCQESNNNEICDYDFGDCCESTCGVDSSESLDEFACSSFACIDPRFVTQSPTPAPLSLECPGDPSCDEG 993 E+NNIEECDYD GDCC+CTCG ES DL D SC DFACVDPNAPCVDD +TEGMFE CFNFGDGFC+DYNNNEQCGYDGGDCCECTCVV WS E CTEFACIDPT+PC DDDD TADA+E+C+++YLGDG C+T NNIEIC YDGGDCCECT VLD C+DPTASCFDE+ITVDM+E CD ELLGD C SNN E+CDYDFGDCCE+TCGVDSS +LDE +CSSFACIDP+FVT +PTPAPLS EC DP+C +G Sbjct: 3 EANNIEECDYDAGDCCQCTCGIESDDLPDFSCVDFACVDPNAPCVDDDVTEGMFEDCFNFGDGFCNDYNNNEQCGYDGGDCCECTCVVD--WSAEFGCTEFACIDPTAPCVDDDDVTADALENCMMEYLGDGYCDTYNNIEICDYDGGDCCECTCGSDSTDVLDXXXXXXXXCIDPTASCFDENITVDMYEYCDVELLGDSICNLSNNFEVCDYDFGDCCEATCGVDSSGTLDELSCSSFACIDPQFVTPAPTPAPLSSECLDDPACVDG 270
BLAST of mRNA_E-siliculosus-1a_F_contig1038.295.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 292 bits (748), Expect = 9.160e-84 Identity = 178/377 (47.21%), Postives = 217/377 (57.56%), Query Frame = 1 Query: 1 GYDGGDCCECTCV--------------DALYPCGYVGFACIDPAAACVDDDYITAELAESCYYAGGHVSGVGNGYCNESNNIEECDYDGGDCCECTCGDESGDLD---------DSSCTD-FACVDPNAPCVDD--ITEGMFEGC--FNFGDGFCDDYNNNEQCGYDGGDCCECTCVVSTG-----WSTESSCTEFACIDPTSPCADDDDTTADAVESCIIDY---LGDGICNTSNNIEICGYDGGDCCECTXXXXXXXVLDGSC-SDFACVDPTASCFDE-SITVDMFENCD-AELLGDGYCQESNNNEICDYDFGDCCESTCGVDSSESLDEFACSSFACIDPRF--VTQSPTPAPLSLECP-----GDPSCDEG 993 GYDGGDCCECTCV D L G GFACIDPAA CV+DD ITA++ E+C G+V G+G+G+C+E NN E C YDGGDCCECTC D D +C FAC+DP+A CVDD +T GM E C + GDG+C+ NNNE C YDGGDCCECTC + WS+ FACIDP +PC DDD T D +++C +Y +G+G C+ NN E+C YDGGDCCECT D +C ++FACVDP A C D+ S+T+DM ENC A +GDGYC E N C YD GDCC TC D D++ FACIDP V + + C GD CD+G Sbjct: 74 GYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAPCVEDDDITADMVENC----GYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDEVTVGMVESCDTVSIGDGYCNMDNNNEACAYDGGDCCECTCEDTPNNRCGRWSS------FACIDPAAPCVDDDSFTVDMIDNC--EYPGGIGNGWCDVDNNNELCAYDGGDCCECTCESLEDD--DWACRNNFACVDPNAPCVDDDSVTIDMLENCPWAVGIGDGYCSEDLNTPECAYDGGDCCACTCQNDVD---DDWXXXXFACIDPEAACVNDDDITVDMFVNCEYPVNVGDGWCDQG 433
BLAST of mRNA_E-siliculosus-1a_F_contig1038.295.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 249 bits (636), Expect = 6.810e-69 Identity = 138/275 (50.18%), Postives = 166/275 (60.36%), Query Frame = 1 Query: 1 GYDGGDCCECTCVDALYPCGYVGFACIDPAAACVDDDYITAELAESCYYAGGHVSGVGNGYCNESNNIEECDYDGGDCCECTC---GDESGDLDDSSCTD---FACVDPNAPCV--DDITEGMFEGC----FNFGDGFCDDYNNNEQCGYDGGDCCECTCVVSTGWSTESSCTEFACIDPTSPCADDDDTTADAVESC-IIDYLGDGICNTSNNIEICGYDGGDCCECTXXXXXXXVLDGSC-SDFACVDPTASCFDESITVDMFENCDAELLGD 783 GYDGGDCC CTC+D Y CG GFACIDP+A C DDD +T + E+C V +G+G C+ NN EEC YDGGDCC CTC D+SGD D S C++ FAC+DP+APCV DDIT M + C NFGDG+CDD NNN++CGYD GDCC CTCV T E F C+DP++ C DDD + + C + +G C+ NN E C YDGGDCCECT SC S F C DPTA CFDE T+ E+ D + D Sbjct: 199 GYDGGDCCFCTCLDDFYECGIRGFACIDPSAECADDDDVTVDTVENC-----GVRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGD-DGSLCSESTVFACIDPDAPCVNDDDITVDMMDTCGGHPINFGDGWCDDDNNNKECGYDSGDCCSCTCVDGT---YECGIVGFDCVDPSAECVDDDYPSTGVTDDCGNAGTVANGYCDFDNNKEECAYDGGDCCECTCEPSGLEDGSDSCTSGFDCQDPTAPCFDEEPTLPEKEDDDGSMSYD 464
BLAST of mRNA_E-siliculosus-1a_F_contig1038.295.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 244 bits (622), Expect = 2.590e-68 Identity = 138/269 (51.30%), Postives = 165/269 (61.34%), Query Frame = 1 Query: 172 GNGYCNESNNIEECDYDGGDCCECTCGDESGDLDDSSCTD----FACVDPNAPCV--DDITEGMFEGC--FNFGDGFCDDYNNNEQCGYDGGDCCECTCVVSTG--WSTES--SCTE-FACIDPTSPCADDDDTTADAVESCIIDYLGDGICNTSNNIEICGYDGGDCCECTXXXXXXXVLDGSCSDFACVDPTASCFDE-SITVDMFENCD-AELLGDGYCQESNNNEICDYDFGDCCESTCGVDSSESLDEFACSS----FACIDPR 921 G+GYC NN EC YDGGDCCECTC + G C+ FACVDP+APC D +T + C ++ GDG+CD NNNE CGYDGGDCCECTC V T W + +C E FACIDP++PC +DDD T D ESC +GDG C+ NN C YDGGDCCECT G S FAC+DP A C D+ S+TVDM +NCD ++G+G+C E NNNE+C YD GDCCE TC S D++ CSS F C DP Sbjct: 37 GDGYCTPPNNNAECGYDGGDCCECTCQNPQGGDHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQECDFWDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESCDAVGMGDGYCDMDNNNAACAYDGGDCCECTCEPNNKC---GGRSGFACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTC---ESAWNDDYTCSSEHGTFNCKDPN 299
BLAST of mRNA_E-siliculosus-1a_F_contig1038.295.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI) HSP 1 Score: 236 bits (602), Expect = 1.210e-66 Identity = 129/264 (48.86%), Postives = 160/264 (60.61%), Query Frame = 1 Query: 1 GYDGGDCCECTCVDALYPCG-YVGFACIDPAAACVDDDYITAELAESCYYAGGHVSGVGNGYCNESNNIEECDYDGGDCCECTCGDESGDLDDSS--CTD-----FACVDPNAPCVDD--ITEGMFEGCFN--FGDGFCDDYNNNEQCGYDGGDCCECTCVV-STGWSTESSCTEFACIDPTSPCADDDDTTADAVESC-IIDYLGDGICNTSNNIEICGYDGGDCCECTXXXXXXXVLDGSCSD------FACVDPTASCFDE 732 G+DGGDCCECTC D Y CG Y G+ACIDP A CVDDD +T ++ E+CY S +GNG C+ N E+C YDGGDCCECTC DS C FAC+DP+APCVDD +T M + C G+G+CDD NN+ +C YDGGDCCECTC G+ FACIDP + C DDDD TA+ E C + +GDG+C+ NN E CG+DGGDCC+CT D +C + F C+D +ASC+ E Sbjct: 113 GFDGGDCCECTCEDGEYTCGQYYGYACIDPDATCVDDDAVTVDMMENCY----DPSRIGNGACDSLLNNEDCAYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDDIVTAEMMDLCSTGQIGNGYCDDSNNSPECAYDGGDCCECTCESHDDGYEYYCEPGSFACIDPEAECVDDDDNTAEQYEHCGWVTRIGDGMCDDENNKEECGFDGGDCCDCTCVVPSSAWSDYACQEVYNINSFDCLDTSASCYGE 372
BLAST of mRNA_E-siliculosus-1a_F_contig1038.295.1 vs. uniprot
Match: A0A6H5K4R2_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R2_9PHAE) HSP 1 Score: 199 bits (507), Expect = 1.030e-53 Identity = 140/357 (39.22%), Postives = 171/357 (47.90%), Query Frame = 1 Query: 1 GYDGGDCCECTCVDALYPCG-YVGFACIDPAAACVDDDYITAELAESCYYAGGHVSGVGNGYCNESNNIEECDYDGGDCCECTCGDESGDLDDSS--CTD-----FACVDPNAPCVDD--ITEGMFEGCFN--FGDGFCDDYNNNEQCG--------------------------------YDGGDCCECTCVV-STGWSTESSCTEFACIDPTSPCADDDDTTADAVESC-IIDYLGDGICNTSNNIEICGYDGGDCCECTXXXXXXXVLDGSCSDFACVDPTASCFDESITVDMFENCDAELLGDGYCQESNNNEICDYDFGDCCESTCGVDSSESLDEFAC------SSFACID 915 G+DGGDCCECTC D Y CG YVG+ACIDP AACVDDD +T ++ E+CY A S +GNG C+ N EEC YDGGDCCECTC DS C FAC+DP+APCVDD +T M + C+ G+G+CDD NN+ +CG YDGGDCCECTC G+ FACIDP + C DDDD TA+ E C + +GDG+C+ NN E EC C DESIT + + G +D GDCCE TC V +S +AC +SF C+D Sbjct: 2 GFDGGDCCECTCEDGEYTCGQYVGYACIDPGAACVDDDAVTVDMMENCYDA----SRIGNGACDSLLNNEECAYDGGDCCECTCDPSRYPWYDSGEGCQTGMYGGFACIDPDAPCVDDDIVTVEMMDLCYTGQIGNGYCDDVNNSPECGMICDAPRVKFICTVFRLQKRDRTFSMLLYSCAYDGGDCCECTCESHDDGYEYYCKPGSFACIDPGAECVDDDDNTAEQYEHCGWVTRIGDGMCDDENNKE----------ECGKGVPRFPKWRAPCD----------VVDESITAGILRL----VTSTG------------FDGGDCCECTCVVSASGGS-PYACQEIYNINSFDCLD 317
BLAST of mRNA_E-siliculosus-1a_F_contig1038.295.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 199 bits (506), Expect = 1.980e-51 Identity = 110/239 (46.03%), Postives = 139/239 (58.16%), Query Frame = 1 Query: 70 FACIDPAAACVDDDYITAELAESCYYAGGHVSGVGNGYCNESNNIEECD---YDGGDCCECTCGDESGDLDDSSCTDFACVDPNAPCVDD--ITEGMFEGC---FNFGDGFCDDYNNNEQCGYDGGDCCECTCVVSTGWSTESS----CTEFACIDPTSPCADDDDTTADAVESC-IIDYLGDGICNTSNNIEICGYDGGDCCECTXXXXXXX--VLDGSCSDFACVDPTASCFDESIT 741 FAC+DP A CVDDD +T ++ E+C ++ +G+G+GYC+E+ N EC+ YD DD SCT FAC+DP A CVDD IT MFE C + GDG+CD+ NNNE CGYDGGDCCECTC + + + C EF+CIDP + C DDD T D E+C + +G+G C+ +NN E CGYDGGDCC CT + F C DP ASCF E T Sbjct: 13 FACVDPNAPCVDDDSVTVDMIENCSWS----TGIGDGYCSENLNTPECEVGVYD----------------DDWSCTRFACIDPEAACVDDDDITVDMFENCDYALSVGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEEST 231 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1038.295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1038.295.1 >prot_E-siliculosus-1a_F_contig1038.295.1 ID=prot_E-siliculosus-1a_F_contig1038.295.1|Name=mRNA_E-siliculosus-1a_F_contig1038.295.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=522bp MFEGCFNFGDGFCDDYNNNEQCGYDGGDCCECTCVVSTGWSTESSCTEFAback to top mRNA from alignment at E-siliculosus-1a_F_contig1038:26246..30853+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1038.295.1 ID=mRNA_E-siliculosus-1a_F_contig1038.295.1|Name=mRNA_E-siliculosus-1a_F_contig1038.295.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4608bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1038:26246..30853+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1038:26246..30853+ >mRNA_E-siliculosus-1a_F_contig1038.295.1 ID=mRNA_E-siliculosus-1a_F_contig1038.295.1|Name=mRNA_E-siliculosus-1a_F_contig1038.295.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3132bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1038:26246..30853+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |