mRNA_E-siliculosus-1a_F_contig1038.293.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1038.293.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1038.293.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1038.293.1 vs. uniprot
Match: D8LEX4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEX4_ECTSI)

HSP 1 Score: 802 bits (2072), Expect = 1.850e-289
Identity = 406/411 (98.78%), Postives = 408/411 (99.27%), Query Frame = 3

Query:  138 PQAATEYMIRPETTKPALNTAQWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDAKKDESYLRRIIMPLEVLLLTYKRVVVKDSAVNAICYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVKSGLLDKHGRENASTPKDWKTSYHDLTPKATKKKDAGESGDA 1370
            PQAATEYMIRPETTKPALNT+QWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYD KKDESYLRRIIMPLEVLLLTYKRVVVKDSAVNA+CYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVKSGLLDKHGRENASTPKDWKTSYHDLTPKA KK DAGESGDA
Sbjct:   30 PQAATEYMIRPETTKPALNTSQWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEVLLLTYKRVVVKDSAVNAVCYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVKSGLLDKHGRENASTPKDWKTSYHDLTPKAMKK-DAGESGDA 439

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BLAST of mRNA_E-siliculosus-1a_F_contig1038.293.1 vs. uniprot
Match: A0A7S2V3R2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3R2_9STRA)

HSP 1 Score: 609 bits (1570), Expect = 2.480e-214
Identity = 302/405 (74.57%), Postives = 350/405 (86.42%), Query Frame = 3

Query:  138 PQAATEYMIRPETTKPALNTAQWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDAKKDESYLRRIIMPLEVLLLTYKRVVVKDSAVNAICYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVKSGLLDKHGRENASTPKDWKTSYHDL-TPKATKKKD 1349
            P AAT+YMIRPE +KP L+T++WPLLL++YD L  R AHYTP+P GCSPLKR ++EYIRYGV+N+DKP+NPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGCLIVCIDRATRLVK+QQSAGKEYVG+ R H+A+  ++   R     A+  LTGALFQRPPLISAVKRQLRIRTIY +KL++YD+DRHLG+FWVSCQAGTYVRTLCVHLGL+ GTGGHMQELRRVRSGVLSE  +LVTMHDVLDAQ+ YD  KDE+YLRR++ PLE+LL  +KR+VVKDSAVNAICYGA LMIPGLLRFA DI++N EVVM+TTKGEAIAVGIAQM + VMATCDHG VA IKRV+MERDTYPRRWGLG VA +KK M+K+G LDKHG+ NA TP ++   Y DL + KA + KD
Sbjct:   27 PLAATDYMIRPEKSKPKLDTSKWPLLLKHYDQLHVRTAHYTPIPVGCSPLKRPIQEYIRYGVMNVDKPSNPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQSAGKEYVGVVRLHAAIPSTSTLTR-----ALETLTGALFQRPPLISAVKRQLRIRTIYQAKLLDYDSDRHLGVFWVSCQAGTYVRTLCVHLGLLTGTGGHMQELRRVRSGVLSENEHLVTMHDVLDAQYQYDTYKDEAYLRRVVKPLELLLTGFKRLVVKDSAVNAICYGAMLMIPGLLRFADDIDVNDEVVMITTKGEAIAVGIAQMTTAVMATCDHGIVAKIKRVVMERDTYPRRWGLGPVANRKKEMIKAGKLDKHGKPNADTPAEFLQWYKDLKSGKAIQDKD 426

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BLAST of mRNA_E-siliculosus-1a_F_contig1038.293.1 vs. uniprot
Match: W7U954_9STRA (H aca ribonucleoprotein complex subunit 4 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U954_9STRA)

HSP 1 Score: 606 bits (1563), Expect = 6.950e-212
Identity = 298/385 (77.40%), Postives = 335/385 (87.01%), Query Frame = 3

Query:  147 ATEYMIRPETTKPALNTAQWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDAKKDESYLRRIIMPLEVLLLTYKRVVVKDSAVNAICYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVKSGLLDKHGRENASTPKDW 1301
            +TE+MI+PET  P L+T+ WPLLL+NYD L  R A YTP+P G SPLKR LKEY+RYGVINLDKPANPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGCLIVCIDRATRLVKAQQ AGKEYVG+ R H A++G +     K+ +AV  LTGALFQRPPLI+AVKRQLRIRTIY+SKL+EYD  RHLG+FWVSC+AGTY+RTLCVHLGL+VGTGGHMQELRRVRSGVL+E  +L+TMHDVLDAQ+ YD  KDESYLRR ++PLE+L    KRVVVKDSAVNAICYGA+LMIPGLLRFA  IE+N EVVMVTTKGEAIAVGIAQM + VMATCDHG VA IKRV+MERDTYPRRWGLG VATKKK ++K G LDKHGR NA TP+D+
Sbjct:   51 STEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGES-----KLVRAVETLTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDY 430

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BLAST of mRNA_E-siliculosus-1a_F_contig1038.293.1 vs. uniprot
Match: A0A7S4VRT4_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VRT4_9STRA)

HSP 1 Score: 605 bits (1559), Expect = 9.040e-212
Identity = 294/395 (74.43%), Postives = 340/395 (86.08%), Query Frame = 3

Query:  138 PQAATEYMIRPETTKPALNTAQWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDAKKDESYLRRIIMPLEVLLLTYKRVVVKDSAVNAICYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVKSGLLDKHGRENASTPKDWKTSYHDL 1322
            P  +  +MI P ++ P L+T++WPLLL+NYD L  R +HYTP+P+G SPL R LK++I YGVINLDKPANPSSHEVV+WIKRILR +KTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVG+ R HSA+D + V     + +AV  LTGALFQRPPLISAVKRQLRIRTIY+SKLIEYD+ R+LGIFWVSC+AGTY+RT+CVHLGL+VGTGGHMQELRR RSG++ EE N+VTMHDV+DAQHVYD  KDE YLRR++MPLEVLL  YKR+VVKDSAVNAICYGAKLMIPGLLRFA DI+INTEVV++TTKGEAIA+ IAQM + VMATCDHG VA IKRVIMERDTYPRRWGLG +A +KK+M+K G LDKHG+ N  TPKD+   Y D+
Sbjct:   27 PNTSAGHMIEPSSSTPKLDTSKWPLLLKNYDQLHVRTSHYTPIPTGSSPLARPLKDHISYGVINLDKPANPSSHEVVSWIKRILRAEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGVVRLHSAIDDTKV-----LNRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDDKRNLGIFWVSCEAGTYIRTMCVHLGLLVGTGGHMQELRRARSGIMREEDNMVTMHDVMDAQHVYDTTKDEKYLRRVVMPLEVLLTNYKRIVVKDSAVNAICYGAKLMIPGLLRFADDIDINTEVVLMTTKGEAIAMAIAQMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGPMAQRKKSMIKEGKLDKHGKPNDKTPKDFLEGYKDI 416

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BLAST of mRNA_E-siliculosus-1a_F_contig1038.293.1 vs. uniprot
Match: A0A7S3V9Q7_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V9Q7_9STRA)

HSP 1 Score: 601 bits (1550), Expect = 9.560e-211
Identity = 291/386 (75.39%), Postives = 337/386 (87.31%), Query Frame = 3

Query:  156 YMIRPETTKPALNTAQWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDAKKDESYLRRIIMPLEVLLLTYKRVVVKDSAVNAICYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVKSGLLDKHGRENASTPKDWKTSY 1313
            +MI P +  P ++T++WPLLLRNY DL  R +HYTP+PSG SPL R L+E++ YGVINLDKPANPSSHEVV+WIKRILRV+KTGHSGTLDPKVTGCLIVC+DRATRLVKAQQSAGKEY+G+ R HSA+     E   ++ +AV  LTGALFQRPPLISAVKRQLRIRTIY+SKLIE+D DR+LGIFWVSC+AGTY+RTLCVHLGL+VGTGGHMQELRRVRSG+L E+ NLVTMHDVLDAQHVYD  KDE YLRR++MPLE+LL+ +KR+VVKDSAVNAICYGAKLMIPGLLRFA DI+I TEVV++TTKGEAIAV IAQM + VMATCDHG VA IKRVIMERD YPRRWGLG +A +KK ++K G LDKHG+ N+STP+D+ T Y
Sbjct:   27 HMIEPSSHTPKIDTSKWPLLLRNYSDLNVRTSHYTPIPSGSSPLSRPLREHLSYGVINLDKPANPSSHEVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCVDRATRLVKAQQSAGKEYIGVVRLHSAI-----EDTKQLNRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEFDKDRNLGIFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGILGEDNNLVTMHDVLDAQHVYDTTKDEKYLRRVVMPLEILLVNFKRIVVKDSAVNAICYGAKLMIPGLLRFADDIDIGTEVVLMTTKGEAIAVAIAQMTTAVMATCDHGIVAKIKRVIMERDAYPRRWGLGPMAQRKKGLIKEGKLDKHGKPNSSTPQDFLTGY 407

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BLAST of mRNA_E-siliculosus-1a_F_contig1038.293.1 vs. uniprot
Match: A0A835YVX3_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVX3_9STRA)

HSP 1 Score: 602 bits (1553), Expect = 1.250e-210
Identity = 297/394 (75.38%), Postives = 334/394 (84.77%), Query Frame = 3

Query:  138 PQAATEYMIRPETTKPALNTAQWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDAKKDESYLRRIIMPLEVLLLTYKRVVVKDSAVNAICYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVKSGLLDKHGRENASTPKDWKTSYHD 1319
            P A     I+P+ + P L+T++WPLLL+NYD L  R  HYTP+PSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYV + R H+A+     E++ K+ +A+  LTGALFQRPPLISAVKRQLRIRTIY SKL+EYD  RHLGIFWVSC+AGTY+RTLCVHLG + G GGHMQELRRVRSGVL E  +LVTMHDVLDAQHVYD  KDE+YLRR +MPLEVLL ++KR+VVKDSAVNAICYGAKLM+PGLLRFA  IE+  EVVM++TKGEAIAVG+A M + VMATCDHG VA IKRVIMERDTYPRRWGLG VA +KK +VK G LDKHGR   +TP +WK  Y D
Sbjct:   33 PLAGAGEFIKPQDSVPKLDTSKWPLLLKNYDQLHVRTGHYTPIPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVAIVRLHAAL-----ESQAKLARAIETLTGALFQRPPLISAVKRQLRIRTIYASKLVEYDAARHLGIFWVSCEAGTYIRTLCVHLGHLTGVGGHMQELRRVRSGVLDENAHLVTMHDVLDAQHVYDTHKDETYLRRAVMPLEVLLRSFKRLVVKDSAVNAICYGAKLMLPGLLRFADGIEVGEEVVMISTKGEAIAVGVALMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGPVAQRKKGLVKEGKLDKHGRATEATPAEWKAGYTD 421

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BLAST of mRNA_E-siliculosus-1a_F_contig1038.293.1 vs. uniprot
Match: A0A7S2KWJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KWJ2_9STRA)

HSP 1 Score: 597 bits (1540), Expect = 1.330e-209
Identity = 293/390 (75.13%), Postives = 335/390 (85.90%), Query Frame = 3

Query:  144 AATEYMIRPETTKPALNTAQWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDAKKDESYLRRIIMPLEVLLLTYKRVVVKDSAVNAICYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVKSGLLDKHGRENASTPKDWKTSY 1313
            ++T  MI P    P L+T++WPLLL+NY DL  R +HYTP+P G SPL R+LK++I  GVINLDKPANPSSHEVV+WIKRILRV+KTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEY+G+ R HSA+     E    + +AV  LTGALFQRPPLISAVKRQLRIRTIY+SKLIEYD  R+LGIFWVSC+AGTY+RT+CVHLGL+VGTGGHMQELRRVRSGV++E+ NLVTMHDV+DAQHVYD  KDE YLRR++MPLEVLL  YKR+VVKDSAVNAICYGAKLM+PGLLRFA DI+INTEVV++TTKGEAIAVGIAQM + VMATCDHG VA IKRVIMERDTYPRRWGLG +A +KK ++K G LDKHG+ N  TPKD+   Y
Sbjct:   24 SSTSTMIAPSNHTPKLDTSKWPLLLKNYSDLHIRTSHYTPIPCGSSPLARKLKDHISSGVINLDKPANPSSHEVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYIGVVRLHSAI-----EDTKALHRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDEKRNLGIFWVSCEAGTYIRTMCVHLGLLVGTGGHMQELRRVRSGVMAEKDNLVTMHDVMDAQHVYDTTKDEKYLRRVVMPLEVLLTNYKRIVVKDSAVNAICYGAKLMVPGLLRFADDIDINTEVVLMTTKGEAIAVGIAQMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGPMAQRKKGLIKEGKLDKHGKPNDKTPKDFLEEY 408

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BLAST of mRNA_E-siliculosus-1a_F_contig1038.293.1 vs. uniprot
Match: K0R6K1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R6K1_THAOC)

HSP 1 Score: 597 bits (1539), Expect = 2.340e-209
Identity = 294/385 (76.36%), Postives = 334/385 (86.75%), Query Frame = 3

Query:  159 MIRPETTKPALNTAQWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDAKKDESYLRRIIMPLEVLLLTYKRVVVKDSAVNAICYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVKSGLLDKHGRENASTPKDWKTSY 1313
            MI P    P L+T+ WPLLL+NY DL  R +HYTP+P G SPL R LK++I  GVINLDKPANPSSHEVV+WIKRILRV+KTGHSGTLDPKVTGCLIVC+DRATRLVKAQQSAGKEY+G+ R HSA+D +      K+ +AV  LTGALFQRPPLISAVKRQLRIRTIY+SKLIEYD+ R+LGIFWVSC+AGTYVRTLCVHLGL+VGTGGHMQELRRVRSGV++E+ NLVTMHDV+DAQHV+D  KDE YLRR++MPLEVLL  YKRVVVKDSAVNAICYGAKLMIPGLLRFA DI+IN EVV++TTKGEAIAVGIAQM + VMATCDHG VA IKRVIMERDTYPRRWGLG +AT+KKA++K G LD++G+ N  TPKD+   Y
Sbjct:   56 MIEPSKHTPKLDTSNWPLLLKNYSDLHIRTSHYTPIPCGSSPLARNLKDHISSGVINLDKPANPSSHEVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCVDRATRLVKAQQSAGKEYIGVVRLHSAIDDN-----KKLHRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDDQRNLGIFWVSCEAGTYVRTLCVHLGLLVGTGGHMQELRRVRSGVMAEKDNLVTMHDVMDAQHVFDTTKDEKYLRRVVMPLEVLLTNYKRVVVKDSAVNAICYGAKLMIPGLLRFADDIDINQEVVLMTTKGEAIAVGIAQMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGAMATRKKALIKEGKLDRYGKVNEKTPKDFLEGY 435

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BLAST of mRNA_E-siliculosus-1a_F_contig1038.293.1 vs. uniprot
Match: B8C572_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C572_THAPS)

HSP 1 Score: 595 bits (1533), Expect = 2.290e-208
Identity = 303/425 (71.29%), Postives = 342/425 (80.47%), Query Frame = 3

Query:  159 MIRPETTKPALNTAQWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDAKKDESYLRRIIMPLEVLLLTYKRVVVKDSAVNAICYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVKSGLLDKHGRENASTPKDWKTSYHDLTPKATKKKDAGESGDADAGXXXXXXQEAPPDAADAAE 1433
            MI P +  P L+T+ WPLLL+NY DL  R +HYTP+P G SPL R LK++I  GVINLDKPANPSSHEVV+WIKRILRV+KTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVG+ R HSA+     E   ++ +AV  LTGALFQRPPLISAVKRQLRIRTIY+SKLIEYD  R+LGIFWVSC+AGTYVRTLCVHLGL+VGTGGHMQELRRVRSGVL E  NLVTMHDV+DAQHVYD  KDE YLRR++MPLE LL  YKR+VVKDSAVNAICYGAKLMIPGLLRFA DI+IN EVV++TTKGEAIAVGIAQM + VMATCDHG VA IKRVIMERDTYPRRWGLG +A +KK ++K G LDKHG+ N  TPKD+   Y  +   A      G +G +         +EA PD+  A +
Sbjct:    1 MIAPSSHTPKLDTSAWPLLLKNYSDLHIRTSHYTPIPCGSSPLARNLKDHISSGVINLDKPANPSSHEVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGVVRLHSAL-----EDTKQLHRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDEKRNLGIFWVSCEAGTYVRTLCVHLGLLVGTGGHMQELRRVRSGVLDENDNLVTMHDVMDAQHVYDTTKDEKYLRRVVMPLETLLTNYKRIVVKDSAVNAICYGAKLMIPGLLRFADDIDINQEVVLMTTKGEAIAVGIAQMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGPMAQRKKGLIKEGKLDKHGKPNEKTPKDFLEGYKSVEGAAKAPTLGGANGGSTTTPAKIKSEEAKPDSPTAMD 420

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BLAST of mRNA_E-siliculosus-1a_F_contig1038.293.1 vs. uniprot
Match: A0A4P9YYP2_9FUNG (H/ACA ribonucleoprotein complex subunit CBF5 n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YYP2_9FUNG)

HSP 1 Score: 593 bits (1528), Expect = 3.330e-207
Identity = 288/393 (73.28%), Postives = 335/393 (85.24%), Query Frame = 3

Query:  141 QAATEYMIRPETTKPALNTAQWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDAKKDESYLRRIIMPLEVLLLTYKRVVVKDSAVNAICYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVKSGLLDKHGRENASTPKDWKTSYHD 1319
            QA  ++MI+P++T P L+T+QWPLLL+NYD L  R  HYTP+ +GCSPLKR LKEYIRYGVINLDKPANPSSHEVVAWI+RILRV+KTGHSGTLDPKVTGCLIVC+DRATRLVK+QQ AGKEYV + R H  +     E+  K+  A+  LTGALFQRPPLISAVKRQLRIRTI++SKLIE+DNDRHL +FWVSC+AGTY+RTLCVHLGL++G GGHMQELRRVRSG LSE+ ++VTMHDVLDAQ +YD  KDESYLRR++ PLE+LL +YKR+VVKDSAVNAICYGAK+MIPGLLR+ ADIE+  EVV++TTKGEAIA+GIA M + VMATCDHG VA IKRVIMERDTYPRRWGLG  AT+KK M+K G LDK GR   +TP  WK +Y D
Sbjct:    7 QANGDFMIKPQSTTPTLDTSQWPLLLKNYDKLHVRTGHYTPIAAGCSPLKRPLKEYIRYGVINLDKPANPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCVDRATRLVKSQQGAGKEYVAVLRLHDKL-----ESEKKLASAIETLTGALFQRPPLISAVKRQLRIRTIHESKLIEFDNDRHLAVFWVSCEAGTYIRTLCVHLGLLLGVGGHMQELRRVRSGALSEDDDMVTMHDVLDAQWLYDNAKDESYLRRVVRPLEMLLTSYKRIVVKDSAVNAICYGAKMMIPGLLRYEADIEVGEEVVLMTTKGEAIALGIAMMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGPKATEKKKMIKEGKLDKFGRVTEATPDTWKKNYVD 394

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1038.293.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1038.293.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D8LEX4_ECTSI	1.850e-289	98.78	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S2V3R2_9STRA	2.480e-214	74.57	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
W7U954_9STRA	6.950e-212	77.40	H aca ribonucleoprotein complex subunit 4 n=3 Tax=...	[more]
A0A7S4VRT4_9STRA	9.040e-212	74.43	Hypothetical protein n=4 Tax=Ditylum brightwellii ...	[more]
A0A7S3V9Q7_9STRA	9.560e-211	75.39	Hypothetical protein n=2 Tax=Chaetoceros debilis T...	[more]
A0A835YVX3_9STRA	1.250e-210	75.38	Pseudouridine synthase n=1 Tax=Tribonema minus Tax...	[more]
A0A7S2KWJ2_9STRA	1.330e-209	75.13	Hypothetical protein (Fragment) n=1 Tax=Skeletonem...	[more]
K0R6K1_THAOC	2.340e-209	76.36	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
B8C572_THAPS	2.290e-208	71.29	Uncharacterized protein n=1 Tax=Thalassiosira pseu...	[more]
A0A4P9YYP2_9FUNG	3.330e-207	73.28	H/ACA ribonucleoprotein complex subunit CBF5 n=1 T...	[more]

Pages

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1542
Model size	1589
Exons	9
Hectar predicted targeting category	other localisation
BRITE	ko00000,ko00001,ko00002,ko01000,ko01007,ko03009,ko03016,ko03032
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	J
EC	6.1.1.3
EggNOG OGs	COG0130@1,KOG2529@2759
EggNOG free text desc.	mRNA pseudouridine synthesis
GOs	GO:0000003,GO:0000154,GO:0000454,GO:0000455,GO:0000495,GO:0000723,GO:0001522,GO:0001650,GO:0003006,GO:0003674,GO:0003676,GO:0003720,GO:0003723,GO:0003824,GO:0003964,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005697,GO:0005730,GO:0005732,GO:0005737,GO:0005829,GO:0005911,GO:0006139,GO:0006259,GO:0006278,GO:0006364,GO:0006396,GO:0006403,GO:0006725,GO:0006807,GO:0006996,GO:0007004,GO:0007275,GO:0007276,GO:0007281,GO:0007444,GO:0008150,GO:0008152,GO:0008283,GO:0008284,GO:0009058,GO:0009059,GO:0009451,GO:0009506,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009982,GO:0009987,GO:0010035,GO:0010038,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010638,GO:0010833,GO:0015030,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016556,GO:0016604,GO:0016740,GO:0016772,GO:0016779,GO:0016853,GO:0016866,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019953,GO:0022412,GO:0022414,GO:0022613,GO:0030054,GO:0030154,GO:0030515,GO:0031118,GO:0031120,GO:0031123,GO:0031126,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031429,GO:0031974,GO:0031981,GO:0032200,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033979,GO:0034061,GO:0034470,GO:0034513,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0034964,GO:0035220,GO:0035295,GO:0040031,GO:0042127,GO:0042221,GO:0042254,GO:0042592,GO:0043085,GO:0043144,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043487,GO:0043489,GO:0043628,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0044703,GO:0045934,GO:0045935,GO:0046483,GO:0046689,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051252,GO:0051253,GO:0051276,GO:0051338,GO:0051347,GO:0051704,GO:0051972,GO:0051973,GO:0055044,GO:0060249,GO:0060255,GO:0060341,GO:0060429,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070034,GO:0070201,GO:0070202,GO:0070203,GO:0071704,GO:0071840,GO:0071897,GO:0072588,GO:0072589,GO:0080090,GO:0090304,GO:0090661,GO:0090666,GO:0090669,GO:0090670,GO:0090685,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902369,GO:1902494,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904872,GO:1904874,GO:1904951,GO:1990481,GO:1990904,GO:2000112,GO:2000278,GO:2000573,GO:2001252
KEGG Module	M00359,M00360,M00425
KEGG Pathway	ko00970,ko03008,map00970,map03008
KEGG Reaction	R03663
KEGG ko	ko:K01868,ko:K11131
KEGG rclass	RC00055,RC00523
Preferred name	DKC1
Seed eggNOG ortholog	2880.D8LEX4
Seed ortholog evalue	1e-231
Seed ortholog score	809.3
Taxonomic scope	Eukaryota

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1038.293.1	prot_E-siliculosus-1a_F_contig1038.293.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1038 12917..19619 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927540.3876188-UTR-E-siliculosus-1a_F_contig1038:12869..12916	1622927540.3876188-UTR-E-siliculosus-1a_F_contig1038:12869..12916	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1038 12870..12916 +
1696318575.7683485-UTR-E-siliculosus-1a_F_contig1038:12869..12916	1696318575.7683485-UTR-E-siliculosus-1a_F_contig1038:12869..12916	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1038 12870..12916 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1038:12870..19619+
coding sequence from alignment at E-siliculosus-1a_F_contig1038:12870..19619+

protein sequence of mRNA_E-siliculosus-1a_F_contig1038.293.1

>prot_E-siliculosus-1a_F_contig1038.293.1 ID=prot_E-siliculosus-1a_F_contig1038.293.1|Name=mRNA_E-siliculosus-1a_F_contig1038.293.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=514bp
MSDVKKKKSKKSKGGDEQNGAGAASAAAAAPQAATEYMIRPETTKPALNT
AQWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPAN
PSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSA
GKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQL
RIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQ
ELRRVRSGVLSEEGNLVTMHDVLDAQHVYDAKKDESYLRRIIMPLEVLLL
TYKRVVVKDSAVNAICYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIA
VGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVK
SGLLDKHGRENASTPKDWKTSYHDLTPKATKKKDAGESGDADAGASAGAA
QEAPPDAADAAEGEKKKKKKKKDKDKQSKKRSAEGSDEDAMGSPSSEKKK
KKKKKIKTEAEAE*

mRNA from alignment at E-siliculosus-1a_F_contig1038:12870..19619+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1038.293.1 ID=mRNA_E-siliculosus-1a_F_contig1038.293.1|Name=mRNA_E-siliculosus-1a_F_contig1038.293.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6750bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1038:12870..19619+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CAAACGCTGGCTGCTGGCTGCTGTTGTGACTCTGCGAGAAGGAAATCATG
AGTGAGTGCCTCGAGATGCTTGGTGGTTGTGTCTGCTGTTAGACATGCTG
CCTGTGACCTTGTGCTTTGAGAGGGACGCAAGCAGCACCGGATGCAGCTA
CGGTATGGTAGTCTGTTGCCTCGAGGCCATTCCTGCTCCCTGGCACCGCA
GCCGAGCAGCAGCGTCTCAGACGTTGGGGCTTGAGCCCTGGCATGGACGC
CTTTCCGATAGGAACCACTTGTTGGGTTGTTACACAAGCCTCGCTCGCTT
GGTGGGCTGTCTTCTAGGTACCCATCTGGTGGCGGTGTGATGTAAGCACA
GGTCGTATCCTTTCCGCGCCAGCAAGCCTTACAGCCAGCCACAGCGTTGA
GATCGGAGCACCACCCCAGCAGCACAGCAGTCTAGACAACCAGGTGCTAG
GTGCAGCTTGCCAACACGATACACAGGTGGCTCTCACGGTGACGGGATGG
ACACGAAATAATGCAGTAGCCCATCCCAGACCTGATCAGAAGGGAACACC
ATATTTACATCATCCACCCACGACCCGCACATCGAAAACGCATGTTTTTT
TTTCTGTTTTTTTGGCGAAAGAAGGCAAGAGGAGAAAACTGCTCTACAAC
TGTTTGTAACACCAAGATACATGTCATCAGTGTATAGACTTAAGGAGACT
CGAAACAAGTCCAGTACCCAGCCGGTTTTCCGCCACTCACTGAAAAGACT
CTACCACATCCGTTCGACTGTGAGTATATCTCGAATGGGTAGTCTTTCTG
TGTGTGTATTTATTTTTCCTTAATACATACCAGGGATGGCACCTAAGCTA
AGCTTTCTCCCACGCGCGGGTTTTCTTCCCACCTCCTCTTAAATCATCTT
AAATCACAGGCGACGTCAAGAAGAAGAAGAGCAAGAAGTCCAAGGGCGGT
GATGAACAAAATGGCGCCGGCGCCGCCTCCGCCGCCGCAGCAGCCCCTCA
GGCAGCAACGGAGTATATGATCCGGCCGGAGACGACAAAACCGGCCCTCA
ACACAGCCCAGTGGCCGCTGCTGCTACGCAACTACGACGACCTCGAGTGC
AGGGCGGCGCACTACACGCCCCTCCCGAGCGGTTGCTCCCCGTTGAAGCG
CGAGCTCAAGGAGTACATCCGGTACGGCGTCATCAACCTCGATAAACCCG
CCAACCCTTCGTCTCACGAGGTAAGCACTCTGTTTTTTTTTTTTTCTTTT
GGGCGTTAACACGACGAATCCATATCTGATGATGAGATTCCCAGGATAAA
TTCGCATTGAATCCATAGCGTTAGCGGATGCACTACCAATGTTGTTTACG
GTTCCTCGAGCCAACGGTTACCGATCCACCCCCCAAACCAACAAAGTCCG
ACTGCTCCTGCTGCGGCCACACCAGGTGGTGGCGTGGATCAAGCGAATCC
TCCGGGTGGACAAGACGGGCCACAGCGGAACGCTCGACCCCAAGGTTACC
GGGTGCTTGATCGTGTGCATAGACCGAGCGACGAGGCTGGTGAAGGCCCA
GCAGAGCGCGGGGAAGGAGTACGTGGGCCTCGCGAGGTTTCACAGGTGCG
GCGGGATCTGTCTGGTATCTCCGTAGAAAGATATTGGTGCGGTACGAGTG
ATCCCTCCGGGAGTGGGCTCATGAGATAACATCCGAGGGGTGATGCAAGA
TGGCAAGCAGGCAGCAGGCCCAACCCACAGCTGGCTGCGGCTGCCCGTTG
TGACGTTTCCCAAGCTCAACACCTCACATAGCTGACGTGGTCTTAACTCC
AAGAGCCCAGCGAACCTAAACGAACCAACAACAGTAATATTTACAAATCT
GTGTAGTCTTGTGTACTCGTGTGGACATCTTTCGACGCCGGTGTCGGGTT
GAGCGGGATGTTGGCGCGGCAGAGGGAGGACTGTAGCTGCCGAAGCAGGG
TGGTTGGGAGAGGAACAAAGCAATGATTTGCCTCATTCACGTGCCTCCGA
TCGAGCTAGTCGATGAGAAGCCGCGACGAGTTGGTGTTGCGATCAACCTA
TCGACTATTTAGTGAACCCTTTATCCGAACAACGAATTTCATTTGCTGAT
TTGCTGTGGACCAAGCCGTTTGACAGAAAATCAACGGTCCAATCAAGCCA
GCCCATCGAGTAATCCAAGAGGCAAATCGAGCCAGTCCACGGTTCAACCC
GAACGGCCATCCGAATCACTCGAGCAATCAGTGGCAGTTACCCCAACAAC
ACCCACTCTGTTTAATTCTCTCATCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCCCCCTTACACACATTCCCTCTTTTTTGGTTTTCTCTCTACA
TCTTTCTCTCTCACACACGCTCAGACTCACCCCCCCTCTCTCTCGGTCAC
TCTGCCTTTCTCTTATCTTCACGACAACAACGACAGTGCGGTGGACGGGA
GCGCGGTAGAGGCGAGGATGAAGGTGGAGAAGGCGGTGGGATTGCTGACG
GGTGCCCTCTTCCAACGGCCACCCTTGATCTCCGCCGTTAAGAGGCAGCT
CCGGATCCGAACCATCTACGACAGCAAGCTCATCGAGTACGACAACGACC
GTCATCTAGGTGACAAACAGGACCAATCGCACATTTTGGGGGACCCCGCA
GTAGATTTGGGTATTTTGCTGAGTATCTCTTTTGTCTTTTGTACACGTGG
GGGGAATGGTGGGAGAGCAACAGCACGCGGAACGGGGGATGAGGTACTGA
AACACACCGACACCATGATAGGTTGAGCGTGTTCGTTGACGTGTTTTGCC
CCGCTAGCAGACTCGCTTCTTCTTGCATCGTCTTCCAGGAATCTTCTCAT
TTTCTTTGTTGGCTTGCTCTTCTCTTTGGGGGCTGTTGCGTCATTTTCCA
GGGATTTTCTGGGTGAGCTGCCAGGCGGGGACCTACGTGCGCACGCTGTG
CGTCCACCTGGGCCTGATCGTCGGAACGGGGGGGCACATGCAGGAGCTCC
GGCGGGTGCGTTCGGGGGTGTTGTCGGAGGAGGGTAACCTGGTGACGATG
CACGACGTGTTGGACGCGCAGCACGTGTACGACGCCAAGAAGGACGAGTC
TTACCTCAGGAGGATCATCATGCCGCTCGAGGTGGGAGGAGGAGCGGGGG
GGGAGGGGGGCGTACTGTTGATGTATTGTGCTTGTATGCCTTAGCAGTTA
GACCATTGACGCGAGAGGGGTGGGAGGAGGGGGGGGGGGTGTCGTCGACC
GCGCACTGTTGCTGAGTGTGTTTGATGGTTTCGTGGTGGAGGTTTCCACG
TCATATGCGTATGACACTGTACATTTTTCAATGTATTTGTCTTGCTCGGC
GCACTGCAAGGCAACTTCAACTGAGGGGCGCGCTGACTTGATTTCGTAAA
GTGGTTTCCGTTGAGACAGATCGGCAGCTTTTCCCTCCACTAGGACGGAT
ATTCTTAGGTGATACATGTTGTCTCCGCGCTCTTTGGAGACATCACATGG
TAGATGTAGACTCCATCTCCTTGCGCACCCTCAAAGAACAATCGGGGTAA
GCTAAGCTACGTGCTACACACCAGAACTCTTGAGAAGAAGTTGCCGGGTA
AAAATGGCTGTGCGAACGATAAAAAAAGACCTCCTTTAAGTCTCCTAATA
CGCGGTCCTTCCAAAGAAATCGAGAGTGCCGAGCTCCTTGCCAGAAAAAG
ACTGAGTTGGCTTCAGTATGAAAAAGAGTGTGCCCAACACGTGGGGACTG
TTCATGCTGAACCCGAGCCAGCACAAGTCTCCTGTACCAGGCTACGATAT
GTACAGTTTTACCACATAGGGGACACGCGGCCTGGGAGATCGTGCACAGC
AGATCAGAGGCTGAGGAGAGGCATCACACAGCATATCACACAGTGTACCA
CCTCCCCCAAGCATGATAGACGAAGAGTTCTTGTCGCGCGGGTTTTCCTT
AAACGGAGGATGTTTGACCCGTGTCAAAGGAGAGGACTATTTGGAACGCT
GGTCTTGCGGTATACCGGGCAATTTTCTTCCAGAGATTTTTCTCCCTACC
ACTCACCAGAAATGCGATAAACGCAAGGCGCAAGGCGCAATGGAAGTGGA
TACGTGGACACGTGCGCAAAGAGCGGCTGCTGTTCACAGAACACCAGGGT
GTGAAAACAAAACAAACACTCTTGACAACAAAATCCTTTGAAGCTGGTCA
CGATTCCGAAGGCCTCAGTATTTTTTTGGAAAATGTATCTAAATCGTTTC
AAGAAGAGTACCTGTTCGAGACACTACCCCGTTCAATGTGTTGATAACTT
GCCTTGTTGTGCTATGGCATCTTGCGGTGCAACGGTGCAACACAACCCGG
CTCGCCACTGGATAGCGTGAAGGACCAATATTGCTGGGTCTGAAGTTGTG
CTTTTTCCGCATGTCCTACATCCGTGTGCATGAAATCAAAAGTCTCCATT
GGTCGCCGCCTCCAAGATTCGTGTGTAGCAGAGTCAAGACGCACGTACTA
CACGTGCATGACACCAAATGTCTCTTTCTGTGGGCGCCCCCCAAGATTTT
TGGCGAAGTGTGTGTAGCAGAGTCCAGACGCAGAGTGTATTGCTATGTTT
CGCCGGTGCAGGTGTTGCTGCTGACGTACAAGAGAGTGGTGGTGAAGGAC
AGCGCCGTTAACGCGATCTGTTACGGAGCCAAGCTCATGATCCCGGGGCT
CCTGCGGTTCGCGGCCGACATCGAGATCAACACCGAGGTAAGCGGTCCTT
ATCCTTGAGGGAGCTCTTGTTGTCTTCGCTGTCGCTGTCCTCATGCTGTC
AAAATACCGTGGGCAATCACCACCAGATGACGGTAGCGATGGATGCGATA
TATGTCAGGGCCTGTTATACCGTCAATGTTGCACCTAAATTAAACACCCG
CTTTGGATGATGATCCTGGTTGGGGATTTCGGCCATTTGAGGGCTTTCGT
CGTTAGTTTGCCACACCCGAACGTGCCAGTGAGCAACCAACATTTCCCCC
CGCACACACATGCGTTGCCCGATCGATTGAACAGGTGGTTATGGTGACCA
CGAAGGGGGAGGCGATAGCGGTTGGCATAGCGCAGATGATTTCTCCCGTC
ATGGCAACGTGCGACCACGGCACGGTGGCGACGATCAAGAGGGTGATCAT
GGAGAGGGACACTTACCCCCGGCGGTGGGGGCTGGGCCATGTTGCCACCA
AGAAGAAGGCCATGGTTAAGAGCGTGAGTACGAAAACTTAGGGGGGGGAG
GAGGGGCTACTCATGTAAAGGCATGCCGTAGTCGTTTGACCATCGACCTC
GCATCCCTACCGTGCATTTTCGCTGGCCCAGACCACGTTTCACAAGTATG
AACCGCGGGGGATGCCTTGGCGTTTAGACTATTGACAACACATGCTCGAA
TCCTCGAGAGGATGGAGTATTGTTCCGACAGGATCGATCACCGATTGCAA
ATCGTTCTTTCTTTGCCAAAAGGCAAAAAGGGGTGTTTCGGGCATGATGT
TACTACTGACCGTGGTATCGACGTGCTTTGACATCGACCAGTTGGATTGC
TTCAAGAGTGCCCTGCGTGTATGTTTTGCGACTGTCTTTCGTACATGTAC
CTCGACTATATTCTTGGACGTATTTGTTGTGGATGTGTTGGAAGTCTGCT
CAGTGAGAGATGAGAGACACCATCCTTGTGTATTGTTTTGCTGAAATTGT
CTTTCTTGTTTTATATTGTTTGATTATAGGGCCTTCTGGACAAGCACGGT
CGCGAGAACGCCTCCACTCCCAAGGACTGGAAAACCTCGTACCACGACCT
CACCCCCAAGGCGACGAAGAAGAAGGACGCGGGAGAGAGCGGCGACGCTG
ACGCTGGTGCCAGCGCAGGTGCTGCCCAGGAGGCCCCTCCTGATGCGGCC
GATGCGGCCGAAGGGGAGAAGAAGAAGAAGAAGAAAAAGAAGGACAAGGA
CAAGGTGTGTGCGTGTTTATTTTTTTGAAAGTAGTACGAGTTTACGGACG
GACCGATGAAAAGACACACAAGGGTATGCATACAACATAGCTAATTGCGG
GCCCCAACCTGCTCTCCTGACAGGGTGGCAGGGGCGTGAGGAGACTGCTG
TGTGTATGATCATTTAGTTAGCATCGCGGTGGTACCTAAGCTGATGAGTG
CATGGAGAACAGTCTTATGGCGGGAGAGCAAAACGGCAGAGAAAAGTGTA
ACGCCTCCTTATCCGCAGACTGCTGTGTCGACAAGAGGCCGCTGCAACAC
AAGGCTGGACCGTGATGCTATCAAGCCTCCGGATTTATAGAGTACAGATG
TCGCCTTAGTTTCAAGGCCAACTCATGTTTTTTCGTTTTTGTGCACAGCG
AGGTCCTTGAGGCGGGCAAGTGTGCTTGAAACTATTCGGTCTGTGGGGCA
CCTTGCTTGTCAAAAAAATAATGTCCTTACGTGAAGCAGGGAGTTCTGTA
CTTGCAGAAGAAAACAGCGCAATAAATTCGTCGTTCGTTCGCCGATACTC
CCTCCTCCCTAGTTTTCTCGCATTTTTTTTTGTATGGTTTTCCTCGCACA
CCAACGGTCTTGTGTCTCACGCAAAAGTAAAAACACTACTAACGGAAATC
GTGTTCCTGCTTGTTTTTTTTTTTGTTCCTTCCCAGCAGTCCAAGAAGCG
TAGCGCGGAGGGGAGCGATGAGGACGCGATGGGTAGCCCAAGTTCCGAAA
AGAAGAAGAAGAAGAAGAAGAAGATCAAGACGGAGGCGGAGGCGGAGTAA

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1038:12870..19619+

>mRNA_E-siliculosus-1a_F_contig1038.293.1 ID=mRNA_E-siliculosus-1a_F_contig1038.293.1|Name=mRNA_E-siliculosus-1a_F_contig1038.293.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3084bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1038:12870..19619+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAATGAGCGACGTCAAGAAGAAGAAGAGCAAGAAGTCCAAGGGCGGTG
ATGAACAAAATGGCGCCGGCGCCGCCTCCGCCGCCGCAGCAGCCCCTCAG
GCAGCAACGGAGTATATGATCCGGCCGGAGACGACAAAACCGGCCCTCAA
CACAGCCCAGTGGCCGCTGCTGCTACGCAACTACGACGACCTCGAGTGCA
GGGCGGCGCACTACACGCCCCTCCCGAGCGGTTGCTCCCCGTTGAAGCGC
GAGCTCAAGGAGTACATCCGGTACGGCGTCATCAACCTCGATAAACCCGC
CAACCCTTCGTCTCACGAGGCGACGTCAAGAAGAAGAAGAGCAAGAAGTC
CAAGGGCGGTGATGAACAAAATGGCGCCGGCGCCGCCTCCGCCGCCGCAG
CAGCCCCTCAGGCAGCAACGGAGTATATGATCCGGCCGGAGACGACAAAA
CCGGCCCTCAACACAGCCCAGTGGCCGCTGCTGCTACGCAACTACGACGA
CCTCGAGTGCAGGGCGGCGCACTACACGCCCCTCCCGAGCGGTTGCTCCC
CGTTGAAGCGCGAGCTCAAGGAGTACATCCGGTACGGCGTCATCAACCTC
GATAAACCCGCCAACCCTTCGTCTCACGAGGTGGTGGCGTGGATCAAGCG
AATCCTCCGGGTGGACAAGACGGGCCACAGCGGAACGCTCGACCCCAAGG
TTACCGGGTGCTTGATCGTGTGCATAGACCGAGCGACGAGGCTGGTGAAG
GCCCAGCAGAGCGCGGGGAAGGAGTACGTGGGCCTCGCGAGGTTTCACAG
GTGGTGGCGTGGATCAAGCGAATCCTCCGGGTGGACAAGACGGGCCACAG
CGGAACGCTCGACCCCAAGGTTACCGGGTGCTTGATCGTGTGCATAGACC
GAGCGACGAGGCTGGTGAAGGCCCAGCAGAGCGCGGGGAAGGAGTACGTG
GGCCTCGCGAGGTTTCACAGTGCGGTGGACGGGAGCGCGGTAGAGGCGAG
GATGAAGGTGGAGAAGGCGGTGGGATTGCTGACGGGTGCCCTCTTCCAAC
GGCCACCCTTGATCTCCGCCGTTAAGAGGCAGCTCCGGATCCGAACCATC
TACGACAGCAAGCTCATCGAGTACGACAACGACCGTCATCTAGTGCGGTG
GACGGGAGCGCGGTAGAGGCGAGGATGAAGGTGGAGAAGGCGGTGGGATT
GCTGACGGGTGCCCTCTTCCAACGGCCACCCTTGATCTCCGCCGTTAAGA
GGCAGCTCCGGATCCGAACCATCTACGACAGCAAGCTCATCGAGTACGAC
AACGACCGTCATCTAGGGATTTTCTGGGTGAGCTGCCAGGCGGGGACCTA
CGTGCGCACGCTGTGCGTCCACCTGGGCCTGATCGTCGGAACGGGGGGGC
ACATGCAGGAGCTCCGGCGGGTGCGTTCGGGGGTGTTGTCGGAGGAGGGT
AACCTGGTGACGATGCACGACGTGTTGGACGCGCAGCACGTGTACGACGC
CAAGAAGGACGAGTCTTACCTCAGGAGGATCATCATGCCGCTCGAGGGAT
TTTCTGGGTGAGCTGCCAGGCGGGGACCTACGTGCGCACGCTGTGCGTCC
ACCTGGGCCTGATCGTCGGAACGGGGGGGCACATGCAGGAGCTCCGGCGG
GTGCGTTCGGGGGTGTTGTCGGAGGAGGGTAACCTGGTGACGATGCACGA
CGTGTTGGACGCGCAGCACGTGTACGACGCCAAGAAGGACGAGTCTTACC
TCAGGAGGATCATCATGCCGCTCGAGGTGTTGCTGCTGACGTACAAGAGA
GTGGTGGTGAAGGACAGCGCCGTTAACGCGATCTGTTACGGAGCCAAGCT
CATGATCCCGGGGCTCCTGCGGTTCGCGGCCGACATCGAGATCAACACCG
AGGTGTTGCTGCTGACGTACAAGAGAGTGGTGGTGAAGGACAGCGCCGTT
AACGCGATCTGTTACGGAGCCAAGCTCATGATCCCGGGGCTCCTGCGGTT
CGCGGCCGACATCGAGATCAACACCGAGGTGGTTATGGTGACCACGAAGG
GGGAGGCGATAGCGGTTGGCATAGCGCAGATGATTTCTCCCGTCATGGCA
ACGTGCGACCACGGCACGGTGGCGACGATCAAGAGGGTGATCATGGAGAG
GGACACTTACCCCCGGCGGTGGGGGCTGGGCCATGTTGCCACCAAGAAGA
AGGCCATGGTTAAGAGCGTGGTTATGGTGACCACGAAGGGGGAGGCGATA
GCGGTTGGCATAGCGCAGATGATTTCTCCCGTCATGGCAACGTGCGACCA
CGGCACGGTGGCGACGATCAAGAGGGTGATCATGGAGAGGGACACTTACC
CCCGGCGGTGGGGGCTGGGCCATGTTGCCACCAAGAAGAAGGCCATGGTT
AAGAGCGGCCTTCTGGACAAGCACGGTCGCGAGAACGCCTCCACTCCCAA
GGACTGGAAAACCTCGTACCACGACCTCACCCCCAAGGCGACGAAGAAGA
AGGACGCGGGAGAGAGCGGCGACGCTGACGCTGGTGCCAGCGCAGGTGCT
GCCCAGGAGGCCCCTCCTGATGCGGCCGATGCGGCCGAAGGGGAGAAGAA
GAAGAAGAAGAAAAAGAAGGACAAGGACAAGGGCCTTCTGGACAAGCACG
GTCGCGAGAACGCCTCCACTCCCAAGGACTGGAAAACCTCGTACCACGAC
CTCACCCCCAAGGCGACGAAGAAGAAGGACGCGGGAGAGAGCGGCGACGC
TGACGCTGGTGCCAGCGCAGGTGCTGCCCAGGAGGCCCCTCCTGATGCGG
CCGATGCGGCCGAAGGGGAGAAGAAGAAGAAGAAGAAAAAGAAGGACAAG
GACAAGCAGTCCAAGAAGCGTAGCGCGGAGGGGAGCGATGAGGACGCGAT
GGGTAGCCCAAGTTCCGAAAAGAAGAAGAAGAAGAAGAAGAAGATCAAGA
CGGAGGCGGAGGCGGAGTAACAGTCCAAGAAGCGTAGCGCGGAGGGGAGC
GATGAGGACGCGATGGGTAGCCCAAGTTCCGAAAAGAAGAAGAAGAAGAA
GAAGAAGATCAAGACGGAGGCGGAGGCGGAGTAA