mRNA_E-siliculosus-1a_F_contig1037.289.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1037.289.1 vs. uniprot
Match: D7FYR3_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR3_ECTSI) HSP 1 Score: 867 bits (2241), Expect = 4.340e-309 Identity = 464/546 (84.98%), Postives = 470/546 (86.08%), Query Frame = 1 Query: 667 AHHVLEQ-TVVPGLAGAVLKESPSDFVVVEIPQNAGSKFTPADPDEPVPKEARKPVVHKIPPVDTVMAAIKEWRERQLTGAAYQGPEVIPRDEAEQMPWNLAKGFDVVTEQLGAPATVQFQDWLLQVATRVAFDVKEXXXXXXXXXXXXXXXXXXXXXX-PPRQACTSLVVLECPPSLDKAGRTEVHGAFRNHMAYFSTTAIMPAARPKIPGGGDEFGAPPPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEVLCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPGGWGRGEXXXXXXXXXXXXXXXXXFVNFFGEQRFGRDGTNNLDVGLLLLEGDWAGAIDRIMAPHPADSAMVAEAKEAFFDGRDYGYSMSGAAAGXXXXXXXXXXXXXXXXXGQ------EEVVRVTAETARAGVFTIKHVVLPLPGNSVMFPLNPVGEEMLMSLKQDGVDDVILNGHPQKAFDLEGAYRHVMVH 2280
A H+L TVVPGLAGAVLKESPSDFVVVEIPQNAGSKFTPADPDEPVPKEARKPVVHKIPPVDTVMAAIKEWRERQLTGAAYQGPEVIPRDEAEQMPWNLAKGFDVVTEQLGAPAT QFQDWLLQVATRVAFD KEXXXXXXXX PPRQ VVLECPPSLDKAGRTEVHG FRNHMAYFSTTAIMPAARPK+ GGGDEFGAPPP+VPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAE LCQRL+IKRARLSYAGAKDRRALTAQKMRCWRLPAE IHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPP GGWGRGE FVNFFGEQRFGRDGTNNLDVGLLLLEGDW AIDRIMAPHPADSAMV+EAKEAFFDGRDYGYSM GA AG XXX EEVVRVTAE ARAGVFTIKHVVLPLPGNSVMFPLNPVGEEML+SLKQDGVDDVILNGHPQKAFDLEGAYRHVM H
Sbjct: 39 AGHLLPPLTVVPGLAGAVLKESPSDFVVVEIPQNAGSKFTPADPDEPVPKEARKPVVHKIPPVDTVMAAIKEWRERQLTGAAYQGPEVIPRDEAEQMPWNLAKGFDVVTEQLGAPATAQFQDWLLQVATRVAFDAKEXXXXXXXXDGVGGPIDVLLPPPEPPRQ-----VVLECPPSLDKAGRTEVHGTFRNHMAYFSTTAIMPAARPKMAGGGDEFGAPPPMVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLYIKRARLSYAGAKDRRALTAQKMRCWRLPAEAIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPSGGWGRGEAAREG------------FVNFFGEQRFGRDGTNNLDVGLLLLEGDWPAAIDRIMAPHPADSAMVSEAKEAFFDGRDYGYSMRGAPAGGGRRGRGGNRDGREXXXXXXXXXXXEEVVRVTAEAARAGVFTIKHVVLPLPGNSVMFPLNPVGEEMLVSLKQDGVDDVILNGHPQKAFDLEGAYRHVMNH 567
BLAST of mRNA_E-siliculosus-1a_F_contig1037.289.1 vs. uniprot
Match: A0A6H5JU01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU01_9PHAE) HSP 1 Score: 363 bits (933), Expect = 1.470e-116 Identity = 234/252 (92.86%), Postives = 239/252 (94.84%), Query Frame = 1 Query: 253 MLLARGLAASLSWTSASALCYRPPVATAAPHRYAKLATAGSLSGSSSSITCLLTAQQAHEQHRRQRRSTFLHRGGSWRTHALRASQPRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSD--SRAKPKSTLGVAHHVLEQTVVPGLAGAVLKESPSDFVVVEIPQNAGSKFTPADPDEPVPKEARKPVVHKIPPVDTVMAAIKEWRERQLTGAAYQGPEVIPRDEAEQMPWNLAKGFDVVTEQLG 1002
MLLARGLAASLSWTSASALCYR PVATAAPHRYAKLATAG LSGSSS ITCLLT QQAHEQHRRQRRST L+RGGS RTHALRASQPR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SR +PKSTLGVAHHVLEQTVVPGLAGAVLKE+PSDFVVVEIPQNAGSKFTPADPDEPVPKEARKPVVHKIPPVDTVMAAIKEW+ERQLTGAAYQGPEVIPRDEAEQMPWNLAKGFDV+TEQLG
Sbjct: 1 MLLARGLAASLSWTSASALCYRIPVATAAPHRYAKLATAGGLSGSSS-ITCLLTPQQAHEQHRRQRRSTLLYRGGSCRTHALRASQPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRPEPKSTLGVAHHVLEQTVVPGLAGAVLKETPSDFVVVEIPQNAGSKFTPADPDEPVPKEARKPVVHKIPPVDTVMAAIKEWKERQLTGAAYQGPEVIPRDEAEQMPWNLAKGFDVMTEQLG 251
BLAST of mRNA_E-siliculosus-1a_F_contig1037.289.1 vs. uniprot
Match: A0A6H5JSV0_9PHAE (TRUD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV0_9PHAE) HSP 1 Score: 349 bits (895), Expect = 1.730e-108 Identity = 221/353 (62.61%), Postives = 225/353 (63.74%), Query Frame = 1 Query: 1789 FVNFFGEQRFGRDGTNNLDVGLLLLEGDWAGAIDRIMAPHPADSAMVAEAKEAFFDGRDYGYSMS------------------------------------------------------------------------------------------------------GAAAGXXXXXXXXXXXXXXXXX-------------GQEEVVRVTAETARAGVFTIKHVVLPLPGNSVMFPLNPVGEEMLMSLKQDGVDDVILNGHPQKAFDLEGAYRHVMVHPRDFDVKPEPPAAEEQEGPESPGIDAEVAADRARAEEIGAVRGPRGGMPAPTTAAWLRARFRAEVKRRFKGASG 2502
FVNFFGEQRFGRDGTNNLDVGL LLEGDW GAIDRIMAPHPADSAMVAEAKEAFFDGRDYGYSMS G G XXXXXXXXXXXXXXX GQ VVRV+AE ARAGVFTIKHVVLPLPGNSVMFPLN VGEEMLMSLKQDGVDDVILNGHPQ+AFDLEGAYRHVMVHPRDFDVKPEPPAAEE+EGPESP IDAEVAADRARAEEIGAVRGPRGGMPAP TAAWLRARFRAEVKRRFKGA+G
Sbjct: 19 FVNFFGEQRFGRDGTNNLDVGLRLLEGDWVGAIDRIMAPHPADSAMVAEAKEAFFDGRDYGYSMSLLPRTAFVERKILRALRDVQSDPLAALLELPPEVRLLFVQAYQSLLWNRAASRRMGGEFDTRMAVEGDLVLVKGEMPLTAWETRPDDVNKNKNKENASSLYSGRPTGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXEGQGGVVRVSAEVARAGVFTIKHVVLPLPGNSVMFPLNAVGEEMLMSLKQDGVDDVILNGHPQRAFDLEGAYRHVMVHPRDFDVKPEPPAAEEEEGPESPDIDAEVAADRARAEEIGAVRGPRGGMPAPITAAWLRARFRAEVKRRFKGANG 371
BLAST of mRNA_E-siliculosus-1a_F_contig1037.289.1 vs. uniprot
Match: A0A836CLL9_9STRA (TRUD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL9_9STRA) HSP 1 Score: 254 bits (650), Expect = 1.420e-67 Identity = 162/428 (37.85%), Postives = 220/428 (51.40%), Query Frame = 1 Query: 694 VPGLAGAVLKESPSDFVVVEIPQNAGSKFTPADPDEPVPKEARKPVVHKIPPVDTVMAAIKEWR-ERQ-LTGAAYQGPEVIPRDEAEQMPWNLAKGFDVVTEQLGAPATVQFQDWLLQVATRVAFDVKEXXXXXXXXXXXXXXXXXXXXXXPPRQACTSLVVLECPPSLDKAGRTEVHGAFRNHMAYFSTTAIMPAARPKIPGGG----DEFGAPPPIVPNDGKVYLEVSFEK-RKSRASWPKGRGEYLEFSVYKAGRSTSEVAEVLCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPGGWGRGEXXXXXXXXXXXXXXXXXFVNFFGEQRFGRDGTNNLDVGLLLLEGDWAGAIDRIMAPHPADSAMVAEAKEAFFD 1956
VP L GA LK + DFVVVE+P + + +TPADP + KPVV +PP + A++EWR +RQ L+G G + + A + + KGF+V+ LGA QDWLL++A V E + ++L CP +DKAGRT +H F++ Y T ++ + P D + P P LE+ ++ K R WP+GR EYLEFS+YKAGR T E + L + L +KR R SYAG+KDRRA TAQK+RCWRL AE + AD + ++GLAVSD Y ++L LG L+GN F V + P G FVNFFG QRFGR T N +VG+ +L +WA A+D+++AP D A VA AK A+ D
Sbjct: 18 VPALEGASLKNTAQDFVVVELPADGAAAYTPADPSRVLDSSVSKPVVQLLPPRHAIAQAVQEWRWQRQWLSGRLGGGRDAGEAEMAAEALEGMGKGFNVLEGHLGAAQVHLLQDWLLELAAAVDPLTGEFLEGLGGGKGGAGP--------------AARLLLTCPADMDKAGRTGLHSLFKSLFGYLETKTVLGQPQESAPAEAAAEEDADASTPVATP---AAALELQYKPPSKGRRGWPRGRPEYLEFSLYKAGRGTHEAIDALSRVLRVKRTRFSYAGSKDRRAFTAQKVRCWRLEAEEL--VAADAAMQKEGLAVSDLCYKPSELGLGQLRGNRFTVGVSLPEGS----TLADAQLSAAADKLVAQGFVNFFGPQRFGRADTPNHEVGMSILRLEWAEAVDKLLAPSSRDGADVAAAKAAWAD 422
BLAST of mRNA_E-siliculosus-1a_F_contig1037.289.1 vs. uniprot
Match: A0A507DQS8_9FUNG (TRUD domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DQS8_9FUNG) HSP 1 Score: 126 bits (317), Expect = 1.820e-26 Identity = 77/261 (29.50%), Postives = 131/261 (50.19%), Query Frame = 1 Query: 1186 PSLDKAGRTEVHGAFRNHMAYFSTTAIMPAARPKIPGGGDEFGAPPPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEVLCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGL-LSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPGGWGRGEXXXXXXXXXXXXXXXXXFVNFFGEQRFGRDGTNNLDVGLLLLEGDWAGAIDRIMAPHPADSAMVAEAKEAFFDGRD 1965
P +K+ R ++HGAF +HM + T + R ++ GG E + + +R+ R +W + G Y F +YK R T + + + + + + RL++AG KD+R +T+Q R+ AE I+ GL S G+ + ++ Y E+ L LG L+GN F+++LR G F+N+FG QRFG ++ +GL L++GDW+ A+D I+ P +D A V++A+ + + RD
Sbjct: 150 PEKEKSTRAKIHGAFNSHMKGVAYTTTVENDRIEVKWGGGE------------RRGRGGNKPQRQQRKTWDELGGRYCHFVLYKENRETVQSLQAIAKAIKVPTKRLTFAGTKDKRGVTSQ-----RVAAEHIYAEQLAGLNKSMKGIQMGNFSYQESGLKLGQLQGNQFEIVLRDLEG-------TQSDIDKALELLKATGFINYFGMQRFGTQSVSSHKIGLALVKGDWSAAVDLILMPRASDDAEVSKARNVWKEKRD 386
BLAST of mRNA_E-siliculosus-1a_F_contig1037.289.1 vs. uniprot
Match: UPI00105570D7 (pseudouridylate synthase 7 homolog n=1 Tax=Gouania willdenowi TaxID=441366 RepID=UPI00105570D7) HSP 1 Score: 120 bits (300), Expect = 2.080e-24 Identity = 101/376 (26.86%), Postives = 152/376 (40.43%), Query Frame = 1 Query: 1339 DGKVYLEVSFEKRKSRAS------WPKGRGEYLEFSVYKAGRSTSEVAEVLCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPGGWGRGEXXXXXXXXXXXXXXXXXFVNFFGEQRFGRDGTNNLDVGLLLLEGDWAGAIDRIMAPHP-ADSAMVAEAKEAFFDGRD-------------------YGYSMSGAAAGXXXXXXXXXXXXXXXXXGQEEVVR-----------------------------VTAETARAGVFTIKHVVLPLPGNSVMFPLNPVGEEMLMSLKQDGVDDVILNGHPQKAFDLEGAYRHVMVHPRDFDVK 2301
DGK ++ K + WPKGRG Y F +YK + T + VL + L ++ SY G KD+RA+T Q++ ++ AE + +H + L L + ++ Y L LGGL+GNHF V+LR G FVN++G QRFG VG +L+ DW+ +D I+ P P A+ + +E + +D G SM G + VV +T E A++ ++I VV+PLPG V++P + +GE L DG+D + H K + L GAYR ++V P D K
Sbjct: 193 DGKKFIVAYHTAGKKALAAPRKHFWPKGRGSYCHFVLYKENKDTMDAINVLSKFLRLRPNMFSYMGTKDKRAVTVQEIAVLKITAERL--SHLNKCLMN--LKLGNFSYKNYPLKLGGLQGNHFTVILRNISG-------TDEQVNHAMKSLKETGFVNYYGMQRFGTTAVPTQHVGRAILKNDWSQVVDLILKPRPGAEKEFLVRCREEWSKSQDPEAALKKLPNKRCVEGQLLRGLSMYGKKDIVTAFGLIPRNNRLMYIHSYQSVVWNVMVSRRIEAFGLKPVEGDLVLKGTTAHVLTEEEAKS--YSIHDVVMPLPGFDVIYPSHHIGEGYRELLSADGLDIDNMR-HKVKDYSLSGAYRRILVRPSDVSWK 554
BLAST of mRNA_E-siliculosus-1a_F_contig1037.289.1 vs. uniprot
Match: A0A1A8D9Y9_9TELE (Pseudouridylate synthase 7 homolog n=20 Tax=Cyprinodontiformes TaxID=28738 RepID=A0A1A8D9Y9_9TELE) HSP 1 Score: 119 bits (299), Expect = 2.880e-24 Identity = 98/362 (27.07%), Postives = 143/362 (39.50%), Query Frame = 1 Query: 1345 KVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEVLCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPGGWGRGEXXXXXXXXXXXXXXXXXFVNFFGEQRFGRDGTNNLDVGLLLLEGDWAGAIDRIMAPHP-ADSAMVAEAKEAFFDGRD-------------------YGYSMSGAAAGXXXXXXXXXXXXXXXXXGQEEVVRVTAETARAGVF---------------------------TIKHVVLPLPGNSVMFPLNPVGEEMLMSLKQDGVDDVILNGHPQKAFDLEGAYRHVMVHPRD 2289
K EV K + WPK RG Y F++YK + T + VL + L ++ SY G KD+RA+T Q++ ++ AE + AH + L L + ++ Y L LG L+GNHF V++R G F+N+FG QRFG VG +L DW +D I+ P P A+ + +E + +D G SM G + VV T + R F TI +V+PLPG V++P + +GE L DG+D + H K + L GAYR V++ P D
Sbjct: 209 KALAEVKTTKAPRKHFWPKNRGSYCHFTLYKENKDTMDAINVLSKFLRLRPNMFSYMGTKDKRAITVQEIAVLKITAERL--AHLNKCLMN--LKLGNFCYKNHPLKLGELQGNHFTVVIRNISG-------TSEQVHQAMTSLKTTGFINYFGMQRFGTTAVPTQHVGRAILRNDWNEVVDLILKPRPGAEKEFLVRCREEWAKSQDPEAALKKLPNKRCVEGQLLRGLSMYGKKNIVTAFGLIPRNSRLMYIHSYQSVVWNTMVSRRIDSFGLKAVEGDLVLRGTAAHVLSAEEAETHTIHDIVMPLPGFDVIYPSHHIGEGYREMLTADGLDIDNMR-HKVKDYSLAGAYRRVVIRPTD 558
BLAST of mRNA_E-siliculosus-1a_F_contig1037.289.1 vs. uniprot
Match: A0A2B4SFY3_STYPI (Pseudouridylate synthase 7-like n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SFY3_STYPI) HSP 1 Score: 116 bits (291), Expect = 3.370e-23 Identity = 104/438 (23.74%), Postives = 161/438 (36.76%), Query Frame = 1 Query: 1186 PSLDKAGRTEVHGAFRNHMAYFSTTAIMPAARPKIPGGGDEFGAPPPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEVLCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPGGWGRGEXXXXXXXXXXXXXXXXXFVNFFGEQRFGRDGTNNLDVGLLLLEGDWAGAIDRIMAPHPADSAMVAEAKEAFFDGRD----------------------------------------------YGYSM--------------------------SGAAAGXXXXXXXXXXXXXXXXXGQEEVVRVTAETARAGVFTIKHVVLPLPGNSVMFPLNPVGEEMLMSLKQDGVDDVILNGHPQKAFDLEGAYRHVMVHP 2283
P DK R VH A R + A+ + + + + +V+ + ++ + WP G+Y F +YK + T + +L + L IK YAG KDRRA+T QK+ +R+ E + E + S + + +++Y + L LG L GNHF + LR G G E F+N+FG QRFG +G LL +W+ A+D ++ P ++ + A++ + D D + Y S +AA + V VT E + G FTI VVLPLPG V +P N + E + DG+D + H K + L GAYR ++V P
Sbjct: 201 PDDDKDHRRLVHRAIRENFAFLDSDTVDVGNQKAV------------------RVFHNRDSDGKQRSSRWPAELGDYCWFVLYKENKDTMDAINLLSKLLRIKAGSFGYAGTKDRRAVTTQKVSVYRVKVEQLQELNK----SLRNICLGNFQYCKEPLKLGSLSGNHFVITLRNVVGDHGEIEESLKSLKING-------FINYFGLQRFGTTSVPTHKIGCALLLSNWSEAVDLLLNPRSGEADDLTAARQHWKDTHDAKETLKRLPKRKGIESDLLLGLVRHGPSGLVKALQSISRNTRLMYVHAYQSYVWNYMASKRIKEHGMQPIVGDLVVASKSAAPCTTDTGPQDKVEFISEPSRTSVTVVTEELIKTGQFTIHDVVLPLPGYDVAYPNNSLKAEYRKIMANDGLDIENMR-HKVKDYSLSGAYRKLLVKP 608
BLAST of mRNA_E-siliculosus-1a_F_contig1037.289.1 vs. uniprot
Match: A0A4W3INT6_CALMI (TRUD domain-containing protein n=7 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3INT6_CALMI) HSP 1 Score: 116 bits (290), Expect = 3.950e-23 Identity = 101/368 (27.45%), Postives = 155/368 (42.12%), Query Frame = 1 Query: 1342 GKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEVLCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPGGWGRGEXXXXXXXXXXXXXXXXXFVNFFGEQRFGRDGTNNLDVGLLLLEGDWAGAIDRIMAPHP-ADSAMVAEAKEAFFDGRD------------------------YGYSMSGAAAGXXXXXXXXXXXXXXXXXGQEEVVRVTAET----ARAGVFTIK------------------HVVLPLPGNSVMFPLNPVGE---EMLMSLKQDGVDDVILNG--HPQKAFDLEGAYRHVMVHPRD 2289
GK L F RK SWPK RG Y F +YK + T + VL + L +K SY G KD+RA+T Q++ ++ A+ + +H + L + ++ Y + L LG L+GNHF ++LR G + E F+N++G QRFG VG +L+ DW+ +D I+ P P A+ + + +E + +D YG +A G ++V E A AG T+K VV+PLPG V++P + +GE EML VDD+ +N H + + L GAYR +++ P+D
Sbjct: 227 GKTALASKFYPRKH--SWPKSRGSYCHFVLYKENKDTMDAINVLSKFLRVKPNIFSYMGTKDKRAITVQEIAVLKITAQRL--SHLNKCLMN--FRLGNFSYKKHPLKLGELQGNHFTIVLRNITGSHEQVEQAMTSLREIG-------FINYYGMQRFGTTAVPTYQVGKAILQNDWSEVMDLILKPRPGAEKGYLVKCREEWAKTKDPEAALRKLPVKRCVEGQLLRGLARYGMKNIVSAFGIIPRNNRLMYIHSYQSYVWNKLVSKRIEDYGLRAVAGDLTLKGATAVHIEESDVDKYSIHDVVMPLPGFDVLYPKHKIGECYKEML------DVDDLDINNMRHRIRDYSLSGAYRKIIIRPQD 575
BLAST of mRNA_E-siliculosus-1a_F_contig1037.289.1 vs. uniprot
Match: A0A8H7UBZ9_9FUNG (TRUD domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UBZ9_9FUNG) HSP 1 Score: 115 bits (289), Expect = 5.150e-23 Identity = 78/267 (29.21%), Postives = 120/267 (44.94%), Query Frame = 1 Query: 1180 CPPSLDKAGRTEVHGAFRNHMAYFSTTAIMPAARPKIPGGGDEFGAPPPIVPNDGKVYLEV-----SFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEVLCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPGGWGRGEXXXXXXXXXXXXXXXXXFVNFFGEQRFGRDGTNNLDVGLLLLEGDWAGAIDRIMAPHPADSAMVAEAKEAFFDGRD 1965
CPP DK RTE H F+ H T DG + + +KR + + G YL+FS+YK + T E +C+ + LSYAG KDRRA+T Q + + AE + A + +L++ G+ V++++YV+ L LG LKGN F ++LR G F+N++G QRFG + VG +L+G+W AI+ I+ P +D A A++ + D +D
Sbjct: 161 CPPQDDKQQRTETHQLFKEHFKNKLMTTTQ-----------------------DGSIVVRWWRPSDKNDKRTMKDEFEALGGTYLQFSLYKENKDTMEAVNTICKTCRLAPKSLSYAGTKDRRAITVQNVTAYHALAEKL--ARSQEVLNRQGIYVANFKYVKNALKLGDLKGNRFGIVLRNIAGA------SQETIEESLKHLKENGFINYYGMQRFGTGSISTHTVGQHVLKGNWKEAINLILKPRASDRYDWARARKIWEDTQD 396 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1037.289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1037.289.1 >prot_E-siliculosus-1a_F_contig1037.289.1 ID=prot_E-siliculosus-1a_F_contig1037.289.1|Name=mRNA_E-siliculosus-1a_F_contig1037.289.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=834bp MCWFGPNRLALHRCIPLLLSPRGGRHGVGALLRGRGTLVLTCFVLQINCSback to top mRNA from alignment at E-siliculosus-1a_F_contig1037:2174..12954+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1037.289.1 ID=mRNA_E-siliculosus-1a_F_contig1037.289.1|Name=mRNA_E-siliculosus-1a_F_contig1037.289.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10781bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1037:2174..12954+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1037:2174..12954+ >mRNA_E-siliculosus-1a_F_contig1037.289.1 ID=mRNA_E-siliculosus-1a_F_contig1037.289.1|Name=mRNA_E-siliculosus-1a_F_contig1037.289.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5004bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1037:2174..12954+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |